RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 NISCHQ9Y2I1 1504 aa34.68■■■■□ 3.14
CDKN1A-203ENST00000405375 CCDC180Q9P1Z9 1646 aa29.72■■■□□ 2.35
CDKN1A-203ENST00000405375 ZCCHC6Q5VYS8 1495 aaKnown RBP29.31■■■□□ 2.28
CDKN1A-203ENST00000405375 SHROOM4Q9ULL8 1493 aa29.07■■■□□ 2.24
CDKN1A-203ENST00000405375 DCAF1Q9Y4B6 1507 aa28.59■■■□□ 2.17
CDKN1A-203ENST00000405375 DCAF8L2P0C7V8 631 aa28.49■■■□□ 2.15
CDKN1A-203ENST00000405375 SUPT5HO00267 1087 aaKnown RBP28.38■■■□□ 2.13
CDKN1A-203ENST00000405375 MYO15BQ96JP2 1530 aa27.9■■■□□ 2.06
CDKN1A-203ENST00000405375 ABCC9O60706 1549 aa27.61■■■□□ 2.01
CDKN1A-203ENST00000405375 SCRIBQ14160 1630 aa27.61■■■□□ 2.01
CDKN1A-203ENST00000405375 CHIC1Q5VXU3 224 aa27.6■■■□□ 2.01
CDKN1A-203ENST00000405375 NACADO15069 1562 aa27.5■■□□□ 1.99
CDKN1A-203ENST00000405375 RSF1Q96T23 1441 aaPredicted RBP27.3■■□□□ 1.96
CDKN1A-203ENST00000405375 RB1CC1Q8TDY2 1594 aa27.07■■□□□ 1.92
CDKN1A-203ENST00000405375 CECR2Q9BXF3 1484 aa26.98■■□□□ 1.91
CDKN1A-203ENST00000405375 MROH2BQ7Z745 1585 aa26.89■■□□□ 1.9
CDKN1A-203ENST00000405375 WIZO95785 1651 aa26.71■■□□□ 1.87
CDKN1A-203ENST00000405375 BAZ1AQ9NRL2 1556 aaPredicted RBP26.67■■□□□ 1.86
CDKN1A-203ENST00000405375 LOC105371045A0A1W2PR82 267 aa26.65■■□□□ 1.86
CDKN1A-203ENST00000405375 UNC13AQ9UPW8 1703 aa26.64■■□□□ 1.86
CDKN1A-203ENST00000405375 TRIM41Q8WV44 630 aa26.54■■□□□ 1.84
CDKN1A-203ENST00000405375 SMARCA4P51532 1647 aa26.47■■□□□ 1.83
CDKN1A-203ENST00000405375 TOP2AP11388 1531 aaKnown RBP26.38■■□□□ 1.81
CDKN1A-203ENST00000405375 EIF4G1Q04637 1599 aaKnown RBP26.35■■□□□ 1.81
CDKN1A-203ENST00000405375 BICRAQ9NZM4 1560 aa26.35■■□□□ 1.81
CDKN1A-203ENST00000405375 PCGF6Q9BYE7 350 aa26.33■■□□□ 1.81
CDKN1A-203ENST00000405375 PABPN1Q86U42 306 aaKnown RBP eCLIP26.3■■□□□ 1.8
CDKN1A-203ENST00000405375 HRCP23327 699 aa26.25■■□□□ 1.79
CDKN1A-203ENST00000405375 SMARCA2P51531 1590 aa26.2■■□□□ 1.78
CDKN1A-203ENST00000405375 CCDC88BA6NC98 1476 aa26.19■■□□□ 1.78
CDKN1A-203ENST00000405375 FAM9AQ8IZU1 332 aaPredicted RBP26.18■■□□□ 1.78
CDKN1A-203ENST00000405375 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
CDKN1A-203ENST00000405375 TRIM26Q12899 539 aaPredicted RBP26.02■■□□□ 1.76
CDKN1A-203ENST00000405375 ABCC8Q09428 1581 aa25.97■■□□□ 1.75
CDKN1A-203ENST00000405375 ATAD2BQ9ULI0 1458 aa25.85■■□□□ 1.73
CDKN1A-203ENST00000405375 EHMT2Q96KQ7 1210 aa25.84■■□□□ 1.73
CDKN1A-203ENST00000405375 BAZ1BQ9UIG0 1483 aaKnown RBP25.72■■□□□ 1.71
CDKN1A-203ENST00000405375 SOGA1O94964 1423 aa25.68■■□□□ 1.7
CDKN1A-203ENST00000405375 EEA1Q15075 1411 aa25.64■■□□□ 1.7
CDKN1A-203ENST00000405375 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
CDKN1A-203ENST00000405375 PPARGC1BQ86YN6 1023 aaKnown RBP25.6■■□□□ 1.69
CDKN1A-203ENST00000405375 RUSC2Q8N2Y8 1516 aa25.55■■□□□ 1.68
CDKN1A-203ENST00000405375 SYNJ1O43426 1573 aa25.52■■□□□ 1.68
CDKN1A-203ENST00000405375 CSRNP3Q8WYN3 585 aa25.52■■□□□ 1.68
CDKN1A-203ENST00000405375 TNIKQ9UKE5 1360 aa25.49■■□□□ 1.67
CDKN1A-203ENST00000405375 CEP162Q5TB80 1403 aa25.46■■□□□ 1.67
CDKN1A-203ENST00000405375 NCAPD3P42695 1498 aa25.44■■□□□ 1.66
CDKN1A-203ENST00000405375 HMGXB3Q12766 1538 aa25.44■■□□□ 1.66
CDKN1A-203ENST00000405375 GOLGA3Q08378 1498 aa25.38■■□□□ 1.65
CDKN1A-203ENST00000405375 ZEB1P37275 1124 aaPredicted RBP25.35■■□□□ 1.65
CDKN1A-203ENST00000405375 KIF21BO75037 1637 aa25.3■■□□□ 1.64
CDKN1A-203ENST00000405375 TOP2BQ02880 1626 aa25.29■■□□□ 1.64
CDKN1A-203ENST00000405375 UBTFP17480 764 aaKnown RBP25.29■■□□□ 1.64
CDKN1A-203ENST00000405375 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
CDKN1A-203ENST00000405375 BIVM-ERCC5R4GMW8 1640 aa25.23■■□□□ 1.63
CDKN1A-203ENST00000405375 CFTRP13569 1480 aa25.14■■□□□ 1.61
CDKN1A-203ENST00000405375 RAPGEF2Q9Y4G8 1499 aa25.09■■□□□ 1.61
CDKN1A-203ENST00000405375 CUX1P39880 1505 aa25.07■■□□□ 1.6
CDKN1A-203ENST00000405375 CLIP1P30622 1438 aa25.05■■□□□ 1.6
CDKN1A-203ENST00000405375 PRXQ9BXM0 1461 aa24.97■■□□□ 1.59
CDKN1A-203ENST00000405375 PRDM2Q13029 1718 aa24.97■■□□□ 1.59
CDKN1A-203ENST00000405375 TTBK1Q5TCY1 1321 aaPredicted RBP24.96■■□□□ 1.59
CDKN1A-203ENST00000405375 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
CDKN1A-203ENST00000405375 VPS8Q8N3P4 1428 aa24.94■■□□□ 1.58
CDKN1A-203ENST00000405375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.93■■□□□ 1.58
CDKN1A-203ENST00000405375 KIF27Q86VH2 1401 aa24.88■■□□□ 1.57
CDKN1A-203ENST00000405375 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
CDKN1A-203ENST00000405375 CC2D2AQ9P2K1 1620 aa24.87■■□□□ 1.57
CDKN1A-203ENST00000405375 CCER1Q8TC90 406 aaPredicted RBP24.86■■□□□ 1.57
CDKN1A-203ENST00000405375 ARAP1Q96P48 1450 aa24.71■■□□□ 1.55
CDKN1A-203ENST00000405375 RANGAP1P46060 587 aaPredicted RBP24.7■■□□□ 1.55
CDKN1A-203ENST00000405375 APLP2Q06481 763 aa24.68■■□□□ 1.54
CDKN1A-203ENST00000405375 CUX2O14529 1486 aa24.65■■□□□ 1.54
CDKN1A-203ENST00000405375 FGD5Q6ZNL6 1462 aa24.64■■□□□ 1.54
CDKN1A-203ENST00000405375 IGF1RP08069 1367 aa24.63■■□□□ 1.53
CDKN1A-203ENST00000405375 FANCD2Q9BXW9 1451 aa24.61■■□□□ 1.53
CDKN1A-203ENST00000405375 ARHGAP35Q9NRY4 1499 aa24.55■■□□□ 1.52
CDKN1A-203ENST00000405375 HNRNPUL2Q1KMD3 747 aaKnown RBP24.52■■□□□ 1.52
CDKN1A-203ENST00000405375 DNAJC5BQ9UF47 199 aa24.52■■□□□ 1.52
CDKN1A-203ENST00000405375 DNMBPQ6XZF7 1577 aa24.5■■□□□ 1.51
CDKN1A-203ENST00000405375 CARMIL1Q5VZK9 1371 aa24.5■■□□□ 1.51
CDKN1A-203ENST00000405375 NESP48681 1621 aa24.46■■□□□ 1.51
CDKN1A-203ENST00000405375 KANK4Q5T7N3 995 aaPredicted RBP24.44■■□□□ 1.5
CDKN1A-203ENST00000405375 TOPBP1Q92547 1522 aa24.44■■□□□ 1.5
CDKN1A-203ENST00000405375 ABCA10Q8WWZ4 1543 aa24.42■■□□□ 1.5
CDKN1A-203ENST00000405375 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
CDKN1A-203ENST00000405375 LAMC3Q9Y6N6 1575 aa24.39■■□□□ 1.49
CDKN1A-203ENST00000405375 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
CDKN1A-203ENST00000405375 RRBP1Q9P2E9 1410 aaKnown RBP24.35■■□□□ 1.49
CDKN1A-203ENST00000405375 MAP3K1Q13233 1512 aa24.29■■□□□ 1.48
CDKN1A-203ENST00000405375 URB2Q14146 1524 aaKnown RBP24.28■■□□□ 1.48
CDKN1A-203ENST00000405375 CUL7Q14999 1698 aa24.25■■□□□ 1.47
CDKN1A-203ENST00000405375 TIAM1Q13009 1591 aa24.25■■□□□ 1.47
CDKN1A-203ENST00000405375 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
CDKN1A-203ENST00000405375 DIEXFQ68CQ4 756 aaKnown RBP24.23■■□□□ 1.47
CDKN1A-203ENST00000405375 CCNB3Q8WWL7 1395 aa24.2■■□□□ 1.46
CDKN1A-203ENST00000405375 FHAD1B1AJZ9 1412 aa24.19■■□□□ 1.46
CDKN1A-203ENST00000405375 PDS5BQ9NTI5 1447 aa24.19■■□□□ 1.46
CDKN1A-203ENST00000405375 ZNF316A6NFI3 1004 aaPredicted RBP24.18■■□□□ 1.46
CDKN1A-203ENST00000405375 CLSPNQ9HAW4 1339 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms