RNA–Protein interactions for RNA: ENST00000591333.5

RANBP3-222, Transcript of RAN binding protein 3, human

TSL 4

Gene RANBP3, Length 557 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-222	ENST00000591333	NISCH	Q9Y2I1	1504 aa		39.85	■■■■□ 3.97
RANBP3-222	ENST00000591333	CCDC180	Q9P1Z9	1646 aa		35.77	■■■■□ 3.32
RANBP3-222	ENST00000591333	ABCC9	O60706	1549 aa		35.57	■■■■□ 3.29
RANBP3-222	ENST00000591333	RB1CC1	Q8TDY2	1594 aa		33.93	■■■■□ 3.02
RANBP3-222	ENST00000591333	NACAD	O15069	1562 aa		33.72	■■■□□ 2.99
RANBP3-222	ENST00000591333	DCAF8L2	P0C7V8	631 aa		33.45	■■■□□ 2.95
RANBP3-222	ENST00000591333	MYO15B	Q96JP2	1530 aa		33.3	■■■□□ 2.92
RANBP3-222	ENST00000591333	UNC13A	Q9UPW8	1703 aa		33.3	■■■□□ 2.92
RANBP3-222	ENST00000591333	DNAJC5B	Q9UF47	199 aa		33.23	■■■□□ 2.91
RANBP3-222	ENST00000591333	PABPN1	Q86U42	306 aa	Known RBP eCLIP	33.08	■■■□□ 2.89
RANBP3-222	ENST00000591333	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33.07	■■■□□ 2.88
RANBP3-222	ENST00000591333	BICRA	Q9NZM4	1560 aa		32.99	■■■□□ 2.87
RANBP3-222	ENST00000591333	DCAF1	Q9Y4B6	1507 aa		32.93	■■■□□ 2.86
RANBP3-222	ENST00000591333	SCRIB	Q14160	1630 aa		32.58	■■■□□ 2.81
RANBP3-222	ENST00000591333	SHROOM4	Q9ULL8	1493 aa		32.5	■■■□□ 2.79
RANBP3-222	ENST00000591333	CC2D2A	Q9P2K1	1620 aa		32.18	■■■□□ 2.74
RANBP3-222	ENST00000591333	EIF4G1	Q04637	1599 aa	Known RBP	32.14	■■■□□ 2.74
RANBP3-222	ENST00000591333	CECR2	Q9BXF3	1484 aa		32.02	■■■□□ 2.72
RANBP3-222	ENST00000591333	NCAPD3	P42695	1498 aa		31.11	■■■□□ 2.57
RANBP3-222	ENST00000591333	SMARCA4	P51532	1647 aa		31.09	■■■□□ 2.57
RANBP3-222	ENST00000591333	ATAD2B	Q9ULI0	1458 aa		31.05	■■■□□ 2.56
RANBP3-222	ENST00000591333	SMARCA2	P51531	1590 aa		30.97	■■■□□ 2.55
RANBP3-222	ENST00000591333	HMGXB3	Q12766	1538 aa		30.94	■■■□□ 2.54
RANBP3-222	ENST00000591333	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	30.92	■■■□□ 2.54
RANBP3-222	ENST00000591333	PEG3	Q9GZU2	1588 aa		30.79	■■■□□ 2.52
RANBP3-222	ENST00000591333	BAZ1B	Q9UIG0	1483 aa	Known RBP	30.75	■■■□□ 2.51
RANBP3-222	ENST00000591333	MROH2B	Q7Z745	1585 aa		30.72	■■■□□ 2.51
RANBP3-222	ENST00000591333	ERCC6	Q03468	1493 aa		30.67	■■■□□ 2.5
RANBP3-222	ENST00000591333	NES	P48681	1621 aa		30.62	■■■□□ 2.49
RANBP3-222	ENST00000591333	CUX2	O14529	1486 aa		30.6	■■■□□ 2.49
RANBP3-222	ENST00000591333	LAMC3	Q9Y6N6	1575 aa		30.42	■■■□□ 2.46
RANBP3-222	ENST00000591333	WIZ	O95785	1651 aa		30.39	■■■□□ 2.45
RANBP3-222	ENST00000591333	DNAJC5	Q9H3Z4	198 aa		30.38	■■■□□ 2.45
RANBP3-222	ENST00000591333	THOC2	Q8NI27	1593 aa	Known RBP	30.34	■■■□□ 2.45
RANBP3-222	ENST00000591333	KIF21A	Q7Z4S6	1674 aa		30.3	■■■□□ 2.44
RANBP3-222	ENST00000591333	PDS5B	Q9NTI5	1447 aa		30.17	■■■□□ 2.42
RANBP3-222	ENST00000591333	CADPS	Q9ULU8	1353 aa		30.15	■■■□□ 2.42
RANBP3-222	ENST00000591333	RSF1	Q96T23	1441 aa	Predicted RBP	30.09	■■■□□ 2.41
RANBP3-222	ENST00000591333	TOP2A	P11388	1531 aa	Known RBP	29.99	■■■□□ 2.39
RANBP3-222	ENST00000591333	MRC2	Q9UBG0	1479 aa		29.95	■■■□□ 2.39
RANBP3-222	ENST00000591333	WDR62	O43379	1518 aa		29.91	■■■□□ 2.38
RANBP3-222	ENST00000591333	CFTR	P13569	1480 aa		29.87	■■■□□ 2.37
RANBP3-222	ENST00000591333	CEP164	Q9UPV0	1460 aa		29.86	■■■□□ 2.37
RANBP3-222	ENST00000591333	FANCD2	Q9BXW9	1451 aa		29.83	■■■□□ 2.37
RANBP3-222	ENST00000591333	PRDM2	Q13029	1718 aa		29.71	■■■□□ 2.35
RANBP3-222	ENST00000591333	CCDC88B	A6NC98	1476 aa		29.61	■■■□□ 2.33
RANBP3-222	ENST00000591333	URB2	Q14146	1524 aa	Known RBP	29.61	■■■□□ 2.33
RANBP3-222	ENST00000591333	TOPBP1	Q92547	1522 aa		29.3	■■■□□ 2.28
RANBP3-222	ENST00000591333	IFT140	Q96RY7	1462 aa		29.24	■■■□□ 2.27
RANBP3-222	ENST00000591333	DNMBP	Q6XZF7	1577 aa		29.22	■■■□□ 2.27
RANBP3-222	ENST00000591333	ZNF608	Q9ULD9	1512 aa	Predicted RBP	29.21	■■■□□ 2.27
RANBP3-222	ENST00000591333	ABCC8	Q09428	1581 aa		29.2	■■■□□ 2.26
RANBP3-222	ENST00000591333	OSCAR	Q8IYS5	282 aa		29.14	■■■□□ 2.26
RANBP3-222	ENST00000591333	EIF4G3	O43432	1585 aa	Known RBP	29.11	■■■□□ 2.25
RANBP3-222	ENST00000591333	TRIM41	Q8WV44	630 aa		29.09	■■■□□ 2.25
RANBP3-222	ENST00000591333	TARBP1	Q13395	1621 aa	Known RBP	29.08	■■■□□ 2.25
RANBP3-222	ENST00000591333	POLA1	P09884	1462 aa	Predicted RBP	29.01	■■■□□ 2.23
RANBP3-222	ENST00000591333	AQR	O60306	1485 aa	Known RBP eCLIP	28.93	■■■□□ 2.22	6e-9	■■■■■ 52.5
RANBP3-222	ENST00000591333	CHD1	O14646	1710 aa		28.9	■■■□□ 2.22
RANBP3-222	ENST00000591333	RAD54L2	Q9Y4B4	1467 aa		28.89	■■■□□ 2.22
RANBP3-222	ENST00000591333	RIMBP3C	A6NJZ7	1639 aa		28.88	■■■□□ 2.21
RANBP3-222	ENST00000591333	RIMBP3B	A6NNM3	1639 aa		28.88	■■■□□ 2.21
RANBP3-222	ENST00000591333	RIMBP3	Q9UFD9	1639 aa		28.88	■■■□□ 2.21
RANBP3-222	ENST00000591333	CUX1	P39880	1505 aa		28.85	■■■□□ 2.21
RANBP3-222	ENST00000591333	FGD5	Q6ZNL6	1462 aa		28.85	■■■□□ 2.21
RANBP3-222	ENST00000591333	SOGA1	O94964	1423 aa		28.83	■■■□□ 2.21
RANBP3-222	ENST00000591333	SUPT5H	O00267	1087 aa	Known RBP	28.78	■■■□□ 2.2
RANBP3-222	ENST00000591333	ARHGEF11	O15085	1522 aa		28.78	■■■□□ 2.2
RANBP3-222	ENST00000591333	WDR97	A6NE52	1622 aa		28.76	■■■□□ 2.2
RANBP3-222	ENST00000591333	TDRD9	Q8NDG6	1382 aa	Known RBP	28.75	■■■□□ 2.19
RANBP3-222	ENST00000591333	SNAPC4	Q5SXM2	1469 aa		28.66	■■■□□ 2.18
RANBP3-222	ENST00000591333	FBLN2	P98095	1184 aa		28.64	■■■□□ 2.18
RANBP3-222	ENST00000591333	PBRM1	Q86U86	1689 aa		28.59	■■■□□ 2.17
RANBP3-222	ENST00000591333	GRIN2B	Q13224	1484 aa		28.59	■■■□□ 2.17
RANBP3-222	ENST00000591333	MAGI1	Q96QZ7	1491 aa	Predicted RBP	28.59	■■■□□ 2.17
RANBP3-222	ENST00000591333	ABCA5	Q8WWZ7	1642 aa		28.53	■■■□□ 2.16
RANBP3-222	ENST00000591333	CLASP1	Q7Z460	1538 aa		28.53	■■■□□ 2.16
RANBP3-222	ENST00000591333	ABCA10	Q8WWZ4	1543 aa		28.53	■■■□□ 2.16
RANBP3-222	ENST00000591333	GAPVD1	Q14C86	1478 aa		28.51	■■■□□ 2.15
RANBP3-222	ENST00000591333	ARAP1	Q96P48	1450 aa		28.51	■■■□□ 2.15
RANBP3-222	ENST00000591333	SYNJ2	O15056	1496 aa		28.49	■■■□□ 2.15
RANBP3-222	ENST00000591333	SYNJ1	O43426	1573 aa		28.49	■■■□□ 2.15
RANBP3-222	ENST00000591333	BIVM-ERCC5	R4GMW8	1640 aa		28.47	■■■□□ 2.15
RANBP3-222	ENST00000591333	CYB5RL	Q6IPT4	315 aa		28.46	■■■□□ 2.15
RANBP3-222	ENST00000591333	CHMP7	Q8WUX9	453 aa	Predicted RBP	28.46	■■■□□ 2.15
RANBP3-222	ENST00000591333	TOP2B	Q02880	1626 aa		28.43	■■■□□ 2.14
RANBP3-222	ENST00000591333	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.38	■■■□□ 2.13	5e-6	■■■■■ 29.2
RANBP3-222	ENST00000591333	ADAMTS12	P58397	1594 aa		28.28	■■■□□ 2.12
RANBP3-222	ENST00000591333	GRIN2A	Q12879	1464 aa		28.24	■■■□□ 2.11
RANBP3-222	ENST00000591333	CEP170	Q5SW79	1584 aa		28.17	■■■□□ 2.1
RANBP3-222	ENST00000591333	ERICH3	Q5RHP9	1530 aa		28.17	■■■□□ 2.1
RANBP3-222	ENST00000591333	FHAD1	B1AJZ9	1412 aa		28.14	■■■□□ 2.1
RANBP3-222	ENST00000591333	NUP160	Q12769	1436 aa		28.14	■■■□□ 2.1
RANBP3-222	ENST00000591333	ERCC6L2	Q5T890	1561 aa		28.1	■■■□□ 2.09
RANBP3-222	ENST00000591333	TRH	P20396	242 aa	Predicted RBP	28.08	■■■□□ 2.09
RANBP3-222	ENST00000591333	SHROOM2	Q13796	1616 aa		28.07	■■■□□ 2.08
RANBP3-222	ENST00000591333	RUSC2	Q8N2Y8	1516 aa		27.9	■■■□□ 2.06
RANBP3-222	ENST00000591333	PRG4	Q92954	1404 aa	Predicted RBP	27.83	■■■□□ 2.05
RANBP3-222	ENST00000591333	CUL7	Q14999	1698 aa		27.81	■■■□□ 2.04
RANBP3-222	ENST00000591333	KIF27	Q86VH2	1401 aa		27.81	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms