RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 NISCHQ9Y2I1 1504 aa36.85■■■■□ 3.49
PPFIA1-202ENST00000389547 DCAF8L2P0C7V8 631 aa34.13■■■■□ 3.05
PPFIA1-202ENST00000389547 SHROOM4Q9ULL8 1493 aa32.91■■■□□ 2.86
PPFIA1-202ENST00000389547 SUPT5HO00267 1087 aaKnown RBP32.42■■■□□ 2.78
PPFIA1-202ENST00000389547 ABCC9O60706 1549 aa31.23■■■□□ 2.59
PPFIA1-202ENST00000389547 CCDC180Q9P1Z9 1646 aa30.86■■■□□ 2.53
PPFIA1-202ENST00000389547 ZCCHC6Q5VYS8 1495 aaKnown RBP30.7■■■□□ 2.51
PPFIA1-202ENST00000389547 EHMT2Q96KQ7 1210 aa30.61■■■□□ 2.49
PPFIA1-202ENST00000389547 PELP1Q8IZL8 1130 aaKnown RBP30.42■■■□□ 2.46
PPFIA1-202ENST00000389547 PCGF6Q9BYE7 350 aa30.39■■■□□ 2.45
PPFIA1-202ENST00000389547 PABPN1Q86U42 306 aaKnown RBP eCLIP30.37■■■□□ 2.45
PPFIA1-202ENST00000389547 FAM9AQ8IZU1 332 aaPredicted RBP30.3■■■□□ 2.44
PPFIA1-202ENST00000389547 HRCP23327 699 aa30.22■■■□□ 2.43
PPFIA1-202ENST00000389547 SCRIBQ14160 1630 aa30.03■■■□□ 2.4
PPFIA1-202ENST00000389547 TRIM41Q8WV44 630 aa30.02■■■□□ 2.4
PPFIA1-202ENST00000389547 CHIC1Q5VXU3 224 aa29.9■■■□□ 2.38
PPFIA1-202ENST00000389547 PPARGC1BQ86YN6 1023 aaKnown RBP29.89■■■□□ 2.37
PPFIA1-202ENST00000389547 MYT1Q01538 1121 aa29.56■■■□□ 2.32
PPFIA1-202ENST00000389547 DCAF1Q9Y4B6 1507 aa29.51■■■□□ 2.32
PPFIA1-202ENST00000389547 LOC105371045A0A1W2PR82 267 aa29.51■■■□□ 2.31
PPFIA1-202ENST00000389547 NACADO15069 1562 aa29.44■■■□□ 2.3
PPFIA1-202ENST00000389547 RB1CC1Q8TDY2 1594 aa29.43■■■□□ 2.3
PPFIA1-202ENST00000389547 RANGAP1P46060 587 aaPredicted RBP29.4■■■□□ 2.3
PPFIA1-202ENST00000389547 TTBK1Q5TCY1 1321 aaPredicted RBP29.33■■■□□ 2.29
PPFIA1-202ENST00000389547 UBTFP17480 764 aaKnown RBP29.18■■■□□ 2.26
PPFIA1-202ENST00000389547 RSF1Q96T23 1441 aaPredicted RBP29.17■■■□□ 2.26
PPFIA1-202ENST00000389547 CECR2Q9BXF3 1484 aa29.11■■■□□ 2.25
PPFIA1-202ENST00000389547 ZEB1P37275 1124 aaPredicted RBP29.08■■■□□ 2.25
PPFIA1-202ENST00000389547 CENPBP07199 599 aaPredicted RBP28.99■■■□□ 2.23
PPFIA1-202ENST00000389547 APLP2Q06481 763 aa28.89■■■□□ 2.22
PPFIA1-202ENST00000389547 MYO15BQ96JP2 1530 aa28.86■■■□□ 2.21
PPFIA1-202ENST00000389547 TRIM26Q12899 539 aaPredicted RBP28.82■■■□□ 2.2
PPFIA1-202ENST00000389547 MROH2BQ7Z745 1585 aa28.7■■■□□ 2.18
PPFIA1-202ENST00000389547 ATP1B4Q9UN42 357 aaPredicted RBP28.64■■■□□ 2.17
PPFIA1-202ENST00000389547 SCAF1Q9H7N4 1312 aaKnown RBP28.63■■■□□ 2.17
PPFIA1-202ENST00000389547 BAZ1AQ9NRL2 1556 aaPredicted RBP28.56■■■□□ 2.16
PPFIA1-202ENST00000389547 YTHDC1Q96MU7 727 aaKnown RBP28.55■■■□□ 2.16
PPFIA1-202ENST00000389547 CCER1Q8TC90 406 aaPredicted RBP28.5■■■□□ 2.15
PPFIA1-202ENST00000389547 GTF3C3Q9Y5Q9 886 aa28.45■■■□□ 2.15
PPFIA1-202ENST00000389547 CSRNP3Q8WYN3 585 aa28.34■■■□□ 2.13
PPFIA1-202ENST00000389547 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
PPFIA1-202ENST00000389547 WIZO95785 1651 aa28.33■■■□□ 2.13
PPFIA1-202ENST00000389547 ACIN1Q9UKV3 1341 aaKnown RBP28.27■■■□□ 2.12
PPFIA1-202ENST00000389547 CCDC88BA6NC98 1476 aa28.14■■■□□ 2.1
PPFIA1-202ENST00000389547 DIEXFQ68CQ4 756 aaKnown RBP28.07■■■□□ 2.08
PPFIA1-202ENST00000389547 NEUROD1Q13562 356 aa28.05■■■□□ 2.08
PPFIA1-202ENST00000389547 SMARCA4P51532 1647 aa28.02■■■□□ 2.08
PPFIA1-202ENST00000389547 WRNQ14191 1432 aaPredicted RBP eCLIP27.98■■■□□ 2.07
PPFIA1-202ENST00000389547 ITGAEP38570 1179 aa27.97■■■□□ 2.07
PPFIA1-202ENST00000389547 HNRNPUL2Q1KMD3 747 aaKnown RBP27.96■■■□□ 2.07
PPFIA1-202ENST00000389547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.96■■■□□ 2.07
PPFIA1-202ENST00000389547 ATAD2BQ9ULI0 1458 aa27.94■■■□□ 2.06
PPFIA1-202ENST00000389547 P3H3Q8IVL6 736 aa27.91■■■□□ 2.06
PPFIA1-202ENST00000389547 ABCC8Q09428 1581 aa27.9■■■□□ 2.06
PPFIA1-202ENST00000389547 TOP2AP11388 1531 aaKnown RBP27.89■■■□□ 2.06
PPFIA1-202ENST00000389547 SMARCA2P51531 1590 aa27.84■■■□□ 2.05
PPFIA1-202ENST00000389547 FBLN2P98095 1184 aa27.84■■■□□ 2.05
PPFIA1-202ENST00000389547 SOGA1O94964 1423 aa27.77■■■□□ 2.04
PPFIA1-202ENST00000389547 BICRAQ9NZM4 1560 aa27.71■■■□□ 2.03
PPFIA1-202ENST00000389547 ERICH6Q7L0X2 663 aa27.64■■■□□ 2.02
PPFIA1-202ENST00000389547 ARID3CA6NKF2 412 aa27.6■■■□□ 2.01
PPFIA1-202ENST00000389547 EIF4G1Q04637 1599 aaKnown RBP27.54■■■□□ 2
PPFIA1-202ENST00000389547 UNC13AQ9UPW8 1703 aa27.49■■□□□ 1.99
PPFIA1-202ENST00000389547 EEA1Q15075 1411 aa27.47■■□□□ 1.99
PPFIA1-202ENST00000389547 FAM50AQ14320 339 aaKnown RBP27.47■■□□□ 1.99
PPFIA1-202ENST00000389547 CEP162Q5TB80 1403 aa27.45■■□□□ 1.99
PPFIA1-202ENST00000389547 CADPSQ9ULU8 1353 aa27.43■■□□□ 1.98
PPFIA1-202ENST00000389547 CLIP1P30622 1438 aa27.41■■□□□ 1.98
PPFIA1-202ENST00000389547 KIF27Q86VH2 1401 aa27.41■■□□□ 1.98
PPFIA1-202ENST00000389547 GOLGA3Q08378 1498 aa27.4■■□□□ 1.98
PPFIA1-202ENST00000389547 RUSC2Q8N2Y8 1516 aa27.4■■□□□ 1.98
PPFIA1-202ENST00000389547 NCAPD3P42695 1498 aa27.38■■□□□ 1.97
PPFIA1-202ENST00000389547 TNIKQ9UKE5 1360 aa27.32■■□□□ 1.96
PPFIA1-202ENST00000389547 CUX2O14529 1486 aa27.31■■□□□ 1.96
PPFIA1-202ENST00000389547 DNAJC5BQ9UF47 199 aa27.3■■□□□ 1.96
PPFIA1-202ENST00000389547 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
PPFIA1-202ENST00000389547 NEFLP07196 543 aa27.26■■□□□ 1.96
PPFIA1-202ENST00000389547 ZNF316A6NFI3 1004 aaPredicted RBP27.23■■□□□ 1.95
PPFIA1-202ENST00000389547 TDRD9Q8NDG6 1382 aaKnown RBP27.18■■□□□ 1.94
PPFIA1-202ENST00000389547 BCANQ96GW7 911 aa27.18■■□□□ 1.94
PPFIA1-202ENST00000389547 ERCC6Q03468 1493 aa27.17■■□□□ 1.94
PPFIA1-202ENST00000389547 CHMP7Q8WUX9 453 aaPredicted RBP27.17■■□□□ 1.94
PPFIA1-202ENST00000389547 CARMIL1Q5VZK9 1371 aa27.14■■□□□ 1.94
PPFIA1-202ENST00000389547 PDS5BQ9NTI5 1447 aa27.12■■□□□ 1.93
PPFIA1-202ENST00000389547 CC2D2AQ9P2K1 1620 aa27.11■■□□□ 1.93
PPFIA1-202ENST00000389547 BCL11AQ9H165 835 aa27.09■■□□□ 1.93
PPFIA1-202ENST00000389547 FANCD2Q9BXW9 1451 aa27.08■■□□□ 1.93
PPFIA1-202ENST00000389547 MYT1LQ9UL68 1186 aa27.03■■□□□ 1.92
PPFIA1-202ENST00000389547 NESP48681 1621 aa27.02■■□□□ 1.92
PPFIA1-202ENST00000389547 RAPGEF2Q9Y4G8 1499 aa27.01■■□□□ 1.91
PPFIA1-202ENST00000389547 CFTRP13569 1480 aa26.95■■□□□ 1.9
PPFIA1-202ENST00000389547 ANP32EQ9BTT0 268 aa26.95■■□□□ 1.9
PPFIA1-202ENST00000389547 MIER1Q8N108 512 aa26.93■■□□□ 1.9
PPFIA1-202ENST00000389547 HMGXB3Q12766 1538 aa26.93■■□□□ 1.9
PPFIA1-202ENST00000389547 TRIM52Q96A61 297 aa26.92■■□□□ 1.9
PPFIA1-202ENST00000389547 SYNJ1O43426 1573 aa26.92■■□□□ 1.9
PPFIA1-202ENST00000389547 ZNF777Q9ULD5 760 aaPredicted RBP26.92■■□□□ 1.9
PPFIA1-202ENST00000389547 RAD54L2Q9Y4B4 1467 aa26.86■■□□□ 1.89
PPFIA1-202ENST00000389547 FGD5Q6ZNL6 1462 aa26.85■■□□□ 1.89
PPFIA1-202ENST00000389547 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms