RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 NISCHQ9Y2I1 1504 aa45.16■■■■■ 4.82
CDKN1A-206ENST00000462537 CCDC180Q9P1Z9 1646 aa40.27■■■■■ 4.04
CDKN1A-206ENST00000462537 ABCC9O60706 1549 aa39.55■■■■□ 3.92
CDKN1A-206ENST00000462537 RB1CC1Q8TDY2 1594 aa37.97■■■■□ 3.67
CDKN1A-206ENST00000462537 DCAF8L2P0C7V8 631 aa37.89■■■■□ 3.66
CDKN1A-206ENST00000462537 NACADO15069 1562 aa37.86■■■■□ 3.65
CDKN1A-206ENST00000462537 ZCCHC6Q5VYS8 1495 aaKnown RBP37.59■■■■□ 3.61
CDKN1A-206ENST00000462537 MYO15BQ96JP2 1530 aa37.52■■■■□ 3.6
CDKN1A-206ENST00000462537 DCAF1Q9Y4B6 1507 aa37.32■■■■□ 3.57
CDKN1A-206ENST00000462537 UNC13AQ9UPW8 1703 aa37.14■■■■□ 3.54
CDKN1A-206ENST00000462537 PABPN1Q86U42 306 aaKnown RBP eCLIP36.92■■■■□ 3.5
CDKN1A-206ENST00000462537 BICRAQ9NZM4 1560 aa36.78■■■■□ 3.48
CDKN1A-206ENST00000462537 SCRIBQ14160 1630 aa36.77■■■■□ 3.48
CDKN1A-206ENST00000462537 SHROOM4Q9ULL8 1493 aa36.37■■■■□ 3.41
CDKN1A-206ENST00000462537 DNAJC5BQ9UF47 199 aa36.36■■■■□ 3.41
CDKN1A-206ENST00000462537 EIF4G1Q04637 1599 aaKnown RBP35.85■■■■□ 3.33
CDKN1A-206ENST00000462537 CC2D2AQ9P2K1 1620 aa35.77■■■■□ 3.32
CDKN1A-206ENST00000462537 CECR2Q9BXF3 1484 aa35.54■■■■□ 3.28
CDKN1A-206ENST00000462537 SMARCA4P51532 1647 aa35.11■■■■□ 3.21
CDKN1A-206ENST00000462537 BAZ1AQ9NRL2 1556 aaPredicted RBP35.04■■■■□ 3.2
CDKN1A-206ENST00000462537 ATAD2BQ9ULI0 1458 aa34.92■■■■□ 3.18
CDKN1A-206ENST00000462537 SMARCA2P51531 1590 aa34.9■■■■□ 3.18
CDKN1A-206ENST00000462537 NCAPD3P42695 1498 aa34.9■■■■□ 3.18
CDKN1A-206ENST00000462537 MROH2BQ7Z745 1585 aa34.82■■■■□ 3.16
CDKN1A-206ENST00000462537 HMGXB3Q12766 1538 aa34.76■■■■□ 3.15
CDKN1A-206ENST00000462537 PEG3Q9GZU2 1588 aa34.72■■■■□ 3.15
CDKN1A-206ENST00000462537 BAZ1BQ9UIG0 1483 aaKnown RBP34.67■■■■□ 3.14
CDKN1A-206ENST00000462537 WIZO95785 1651 aa34.48■■■■□ 3.11
CDKN1A-206ENST00000462537 RSF1Q96T23 1441 aaPredicted RBP34.33■■■■□ 3.09
CDKN1A-206ENST00000462537 NESP48681 1621 aa34.17■■■■□ 3.06
CDKN1A-206ENST00000462537 ERCC6Q03468 1493 aa34.13■■■■□ 3.05
CDKN1A-206ENST00000462537 TOP2AP11388 1531 aaKnown RBP34.08■■■■□ 3.05
CDKN1A-206ENST00000462537 LAMC3Q9Y6N6 1575 aa34.06■■■■□ 3.04
CDKN1A-206ENST00000462537 CADPSQ9ULU8 1353 aa33.89■■■■□ 3.02
CDKN1A-206ENST00000462537 PDS5BQ9NTI5 1447 aa33.82■■■■□ 3
CDKN1A-206ENST00000462537 KIF21AQ7Z4S6 1674 aa33.81■■■■□ 3
CDKN1A-206ENST00000462537 CUX2O14529 1486 aa33.76■■■■□ 3
CDKN1A-206ENST00000462537 THOC2Q8NI27 1593 aaKnown RBP33.69■■■□□ 2.98
CDKN1A-206ENST00000462537 CCDC88BA6NC98 1476 aa33.67■■■□□ 2.98
CDKN1A-206ENST00000462537 CFTRP13569 1480 aa33.65■■■□□ 2.98
CDKN1A-206ENST00000462537 FANCD2Q9BXW9 1451 aa33.55■■■□□ 2.96
CDKN1A-206ENST00000462537 CEP164Q9UPV0 1460 aa33.53■■■□□ 2.96
CDKN1A-206ENST00000462537 PRDM2Q13029 1718 aa33.5■■■□□ 2.95
CDKN1A-206ENST00000462537 MRC2Q9UBG0 1479 aa33.5■■■□□ 2.95
CDKN1A-206ENST00000462537 SUPT5HO00267 1087 aaKnown RBP33.45■■■□□ 2.95
CDKN1A-206ENST00000462537 WDR62O43379 1518 aa33.38■■■□□ 2.93
CDKN1A-206ENST00000462537 URB2Q14146 1524 aaKnown RBP33.21■■■□□ 2.91
CDKN1A-206ENST00000462537 TOPBP1Q92547 1522 aa32.98■■■□□ 2.87
CDKN1A-206ENST00000462537 ABCC8Q09428 1581 aa32.96■■■□□ 2.87
CDKN1A-206ENST00000462537 DNMBPQ6XZF7 1577 aa32.95■■■□□ 2.86
CDKN1A-206ENST00000462537 DNAJC5Q9H3Z4 198 aa32.86■■■□□ 2.85
CDKN1A-206ENST00000462537 IFT140Q96RY7 1462 aa32.8■■■□□ 2.84
CDKN1A-206ENST00000462537 POLA1P09884 1462 aaPredicted RBP32.69■■■□□ 2.82
CDKN1A-206ENST00000462537 CUX1P39880 1505 aa32.68■■■□□ 2.82
CDKN1A-206ENST00000462537 ZNF608Q9ULD9 1512 aaPredicted RBP32.68■■■□□ 2.82
CDKN1A-206ENST00000462537 TARBP1Q13395 1621 aaKnown RBP32.63■■■□□ 2.81
CDKN1A-206ENST00000462537 FGD5Q6ZNL6 1462 aa32.61■■■□□ 2.81
CDKN1A-206ENST00000462537 EIF4G3O43432 1585 aaKnown RBP32.59■■■□□ 2.81
CDKN1A-206ENST00000462537 RAD54L2Q9Y4B4 1467 aa32.56■■■□□ 2.8
CDKN1A-206ENST00000462537 SOGA1O94964 1423 aa32.56■■■□□ 2.8
CDKN1A-206ENST00000462537 AQRO60306 1485 aaKnown RBP eCLIP32.48■■■□□ 2.797e-7■■■■■ 50.1
CDKN1A-206ENST00000462537 WRNQ14191 1432 aaPredicted RBP eCLIP32.42■■■□□ 2.78
CDKN1A-206ENST00000462537 TDRD9Q8NDG6 1382 aaKnown RBP32.39■■■□□ 2.78
CDKN1A-206ENST00000462537 BIVM-ERCC5R4GMW8 1640 aa32.38■■■□□ 2.77
CDKN1A-206ENST00000462537 TOP2BQ02880 1626 aa32.37■■■□□ 2.77
CDKN1A-206ENST00000462537 SYNJ1O43426 1573 aa32.37■■■□□ 2.77
CDKN1A-206ENST00000462537 WDR97A6NE52 1622 aa32.37■■■□□ 2.77
CDKN1A-206ENST00000462537 OSCARQ8IYS5 282 aa32.34■■■□□ 2.77
CDKN1A-206ENST00000462537 ABCA10Q8WWZ4 1543 aa32.26■■■□□ 2.75
CDKN1A-206ENST00000462537 CHD1O14646 1710 aa32.23■■■□□ 2.75
CDKN1A-206ENST00000462537 GRIN2BQ13224 1484 aa32.2■■■□□ 2.75
CDKN1A-206ENST00000462537 PBRM1Q86U86 1689 aa32.19■■■□□ 2.74
CDKN1A-206ENST00000462537 SNAPC4Q5SXM2 1469 aa32.19■■■□□ 2.74
CDKN1A-206ENST00000462537 GAPVD1Q14C86 1478 aa32.18■■■□□ 2.74
CDKN1A-206ENST00000462537 FBLN2P98095 1184 aa32.18■■■□□ 2.74
CDKN1A-206ENST00000462537 ABCA5Q8WWZ7 1642 aa32.17■■■□□ 2.74
CDKN1A-206ENST00000462537 MAGI1Q96QZ7 1491 aaPredicted RBP32.12■■■□□ 2.73
CDKN1A-206ENST00000462537 CHMP7Q8WUX9 453 aaPredicted RBP32.03■■■□□ 2.72
CDKN1A-206ENST00000462537 SYNJ2O15056 1496 aa32■■■□□ 2.71
CDKN1A-206ENST00000462537 ERICH3Q5RHP9 1530 aa31.89■■■□□ 2.7
CDKN1A-206ENST00000462537 ADAMTS12P58397 1594 aa31.88■■■□□ 2.69
CDKN1A-206ENST00000462537 RIMBP3CA6NJZ7 1639 aa31.88■■■□□ 2.69
CDKN1A-206ENST00000462537 RIMBP3BA6NNM3 1639 aa31.88■■■□□ 2.69
CDKN1A-206ENST00000462537 RIMBP3Q9UFD9 1639 aa31.88■■■□□ 2.69
CDKN1A-206ENST00000462537 TRIM41Q8WV44 630 aa31.84■■■□□ 2.69
CDKN1A-206ENST00000462537 ARHGEF11O15085 1522 aa31.84■■■□□ 2.69
CDKN1A-206ENST00000462537 CLASP1Q7Z460 1538 aa31.8■■■□□ 2.68
CDKN1A-206ENST00000462537 FHAD1B1AJZ9 1412 aa31.79■■■□□ 2.68
CDKN1A-206ENST00000462537 GRIN2AQ12879 1464 aa31.78■■■□□ 2.68
CDKN1A-206ENST00000462537 KIF27Q86VH2 1401 aa31.75■■■□□ 2.67
CDKN1A-206ENST00000462537 CEP170Q5SW79 1584 aa31.64■■■□□ 2.66
CDKN1A-206ENST00000462537 NUP160Q12769 1436 aa31.61■■■□□ 2.65
CDKN1A-206ENST00000462537 CUL7Q14999 1698 aa31.6■■■□□ 2.65
CDKN1A-206ENST00000462537 IGF1RP08069 1367 aa31.6■■■□□ 2.65
CDKN1A-206ENST00000462537 ARAP1Q96P48 1450 aa31.56■■■□□ 2.64
CDKN1A-206ENST00000462537 CYB5RLQ6IPT4 315 aa31.55■■■□□ 2.64
CDKN1A-206ENST00000462537 CARMIL1Q5VZK9 1371 aa31.43■■■□□ 2.62
CDKN1A-206ENST00000462537 SHROOM2Q13796 1616 aa31.42■■■□□ 2.62
CDKN1A-206ENST00000462537 RUSC2Q8N2Y8 1516 aa31.42■■■□□ 2.62
CDKN1A-206ENST00000462537 ERCC6L2Q5T890 1561 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms