RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 AEBP2Q6ZN18 517 aaPredicted RBP22.11■■□□□ 1.13
FOXN3-213ENST00000556916 CHIC1Q5VXU3 224 aa21.08■□□□□ 0.97
FOXN3-213ENST00000556916 SENP3Q9H4L4 574 aaPredicted RBP18.83■□□□□ 0.6
FOXN3-213ENST00000556916 PHF23Q9BUL5 403 aaPredicted RBP18.59■□□□□ 0.57
FOXN3-213ENST00000556916 POTEDQ86YR6 584 aa17.93■□□□□ 0.46
FOXN3-213ENST00000556916 FOXD1Q16676 465 aa17.53■□□□□ 0.4
FOXN3-213ENST00000556916 PLPPR3Q6T4P5 718 aa16.88■□□□□ 0.29
FOXN3-213ENST00000556916 PPP6R1Q9UPN7 881 aa16.47■□□□□ 0.23
FOXN3-213ENST00000556916 PIAS4Q8N2W9 510 aaPredicted RBP16.45■□□□□ 0.22
FOXN3-213ENST00000556916 ADRA2BP18089 450 aa16.44■□□□□ 0.22
FOXN3-213ENST00000556916 MSH5O43196 834 aa16.37■□□□□ 0.21
FOXN3-213ENST00000556916 MAPK8IP2Q13387 824 aaPredicted RBP15.05■□□□□ -0
FOXN3-213ENST00000556916 SCAF1Q9H7N4 1312 aaKnown RBP14.99□□□□□ -0.01
FOXN3-213ENST00000556916 DMRT2Q9Y5R5 561 aa14.94□□□□□ -0.02
FOXN3-213ENST00000556916 PPP4R3CPQ6ZMV5 832 aa14.82□□□□□ -0.04
FOXN3-213ENST00000556916 CACNB1Q02641 598 aaPredicted RBP14.61□□□□□ -0.07
FOXN3-213ENST00000556916 CNKSR2Q8WXI2 1034 aa14.5□□□□□ -0.09
FOXN3-213ENST00000556916 HOXD11P31277 338 aaPredicted RBP14.42□□□□□ -0.1
FOXN3-213ENST00000556916 DCAF8L1A6NGE4 600 aa14.37□□□□□ -0.11
FOXN3-213ENST00000556916 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
FOXN3-213ENST00000556916 NCBP3Q53F19 620 aaKnown RBP14.26□□□□□ -0.13
FOXN3-213ENST00000556916 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
FOXN3-213ENST00000556916 RNF39Q9H2S5 420 aa13.98□□□□□ -0.17
FOXN3-213ENST00000556916 KCNA4P22459 653 aa13.93□□□□□ -0.18
FOXN3-213ENST00000556916 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
FOXN3-213ENST00000556916 POTEHQ6S545 545 aa13.78□□□□□ -0.2
FOXN3-213ENST00000556916 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
FOXN3-213ENST00000556916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.77□□□□□ -0.218e-18■□□□□ 9.2
FOXN3-213ENST00000556916 U3KPZ7 1027 aaPredicted RBP13.5□□□□□ -0.25
FOXN3-213ENST00000556916 SLC4A2P04920 1241 aa13.42□□□□□ -0.26
FOXN3-213ENST00000556916 SPINK5Q9NQ38 1064 aaPredicted RBP13.28□□□□□ -0.28
FOXN3-213ENST00000556916 CAPN15O75808 1086 aa13.25□□□□□ -0.29
FOXN3-213ENST00000556916 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
FOXN3-213ENST00000556916 DSG3P32926 999 aa13.13□□□□□ -0.31
FOXN3-213ENST00000556916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.12□□□□□ -0.31
FOXN3-213ENST00000556916 HNRNPUL2Q1KMD3 747 aaKnown RBP13.12□□□□□ -0.31
FOXN3-213ENST00000556916 APLP2Q06481 763 aa13.1□□□□□ -0.31
FOXN3-213ENST00000556916 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
FOXN3-213ENST00000556916 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
FOXN3-213ENST00000556916 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
FOXN3-213ENST00000556916 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
FOXN3-213ENST00000556916 ABCB7O75027 752 aa12.98□□□□□ -0.33
FOXN3-213ENST00000556916 FOXD4L1Q9NU39 408 aa12.97□□□□□ -0.33
FOXN3-213ENST00000556916 ZBTB22O15209 634 aa12.82□□□□□ -0.36
FOXN3-213ENST00000556916 ATF5Q9Y2D1 282 aaPredicted RBP12.72□□□□□ -0.37
FOXN3-213ENST00000556916 POLA2Q14181 598 aa12.7□□□□□ -0.38
FOXN3-213ENST00000556916 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
FOXN3-213ENST00000556916 ATXN8OSP0DMR3 200 aa12.5□□□□□ -0.41
FOXN3-213ENST00000556916 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
FOXN3-213ENST00000556916 OSCARQ8IYS5 282 aa12.36□□□□□ -0.43
FOXN3-213ENST00000556916 SP7Q8TDD2 431 aaPredicted RBP12.33□□□□□ -0.44
FOXN3-213ENST00000556916 CSRNP3Q8WYN3 585 aa12.28□□□□□ -0.44
FOXN3-213ENST00000556916 AKT1S1Q96B36 256 aa12.25□□□□□ -0.45
FOXN3-213ENST00000556916 EHMT2Q96KQ7 1210 aa12.25□□□□□ -0.45
FOXN3-213ENST00000556916 CHRDL2Q6WN34 429 aa12.22□□□□□ -0.45
FOXN3-213ENST00000556916 FBLN2P98095 1184 aa12.21□□□□□ -0.45
FOXN3-213ENST00000556916 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.46
FOXN3-213ENST00000556916 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
FOXN3-213ENST00000556916 SPDYE2BA6NHP3 402 aa12.09□□□□□ -0.47
FOXN3-213ENST00000556916 SPDYE6P0CI01 402 aa12.09□□□□□ -0.47
FOXN3-213ENST00000556916 SPDYE2Q495Y8 402 aa12.09□□□□□ -0.47
FOXN3-213ENST00000556916 PITPNM1O00562 1244 aa12.03□□□□□ -0.48
FOXN3-213ENST00000556916 PIP4P2Q8N4L2 257 aa11.95□□□□□ -0.5
FOXN3-213ENST00000556916 ZNF692Q9BU19 519 aaPredicted RBP11.95□□□□□ -0.5
FOXN3-213ENST00000556916 SSUH2Q9Y2M2 353 aa11.95□□□□□ -0.5
FOXN3-213ENST00000556916 FXR2P51116 673 aaKnown RBP eCLIP11.87□□□□□ -0.51
FOXN3-213ENST00000556916 SPDYE1Q8NFV5 336 aaPredicted RBP11.86□□□□□ -0.51
FOXN3-213ENST00000556916 CLEC11AQ9Y240 323 aa11.85□□□□□ -0.51
FOXN3-213ENST00000556916 PLSCR2Q9NRY7 297 aa11.82□□□□□ -0.52
FOXN3-213ENST00000556916 PABPN1Q86U42 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
FOXN3-213ENST00000556916 PRKAR2AP13861 404 aaKnown RBP11.71□□□□□ -0.53
FOXN3-213ENST00000556916 HAX1O00165 279 aa11.69□□□□□ -0.54
FOXN3-213ENST00000556916 PRR29P0C7W0 189 aa11.64□□□□□ -0.55
FOXN3-213ENST00000556916 SPDYE4A6NLX3 237 aa11.62□□□□□ -0.55
FOXN3-213ENST00000556916 CHADLQ6NUI6 762 aa11.62□□□□□ -0.55
FOXN3-213ENST00000556916 EVX2Q03828 476 aa11.55□□□□□ -0.56
FOXN3-213ENST00000556916 LHX8Q68G74 356 aa11.55□□□□□ -0.56
FOXN3-213ENST00000556916 C19orf67A6NJJ6 358 aa11.49□□□□□ -0.57
FOXN3-213ENST00000556916 STAG3Q9UJ98 1225 aa11.47□□□□□ -0.57
FOXN3-213ENST00000556916 FARP1Q9Y4F1 1045 aaPredicted RBP11.44□□□□□ -0.58
FOXN3-213ENST00000556916 CREBZFQ9NS37 354 aa11.39□□□□□ -0.59
FOXN3-213ENST00000556916 CD44P16070 742 aaKnown RBP11.36□□□□□ -0.59
FOXN3-213ENST00000556916 PROM2Q8N271 834 aa11.34□□□□□ -0.59
FOXN3-213ENST00000556916 GABBR2O75899 941 aa11.3□□□□□ -0.6
FOXN3-213ENST00000556916 ZRANB1Q9UGI0 708 aa11.21□□□□□ -0.61
FOXN3-213ENST00000556916 MNX1P50219 401 aaPredicted RBP11.2□□□□□ -0.62
FOXN3-213ENST00000556916 ZNF579Q8NAF0 562 aaKnown RBP11.19□□□□□ -0.62
FOXN3-213ENST00000556916 FKBP8Q14318 412 aa11.17□□□□□ -0.62
FOXN3-213ENST00000556916 NPM1P06748 294 aaKnown RBP eCLIP11.16□□□□□ -0.62
FOXN3-213ENST00000556916 PAK3O75914 559 aaPredicted RBP11.14□□□□□ -0.63
FOXN3-213ENST00000556916 CLCN6P51797 869 aa11.1□□□□□ -0.63
FOXN3-213ENST00000556916 PHF12Q96QT6 1004 aa11.09□□□□□ -0.63
FOXN3-213ENST00000556916 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
FOXN3-213ENST00000556916 GALR2O43603 387 aaPredicted RBP11.05□□□□□ -0.64
FOXN3-213ENST00000556916 PLEKHG5O94827 1062 aa11.05□□□□□ -0.64
FOXN3-213ENST00000556916 MIER1Q8N108 512 aa11.05□□□□□ -0.64
FOXN3-213ENST00000556916 DCBLD2Q96PD2 775 aa11.03□□□□□ -0.64
FOXN3-213ENST00000556916 PLCD3Q8N3E9 789 aa11.01□□□□□ -0.65
FOXN3-213ENST00000556916 TSPYL2Q9H2G4 693 aaPredicted RBP11□□□□□ -0.65
FOXN3-213ENST00000556916 POTEMA6NI47 508 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms