RNA–Protein interactions for RNA: ENST00000426687.2

SHANK2-208, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-208ENST00000426687 NISCHQ9Y2I1 1504 aa23.16■■□□□ 1.3
SHANK2-208ENST00000426687 ABCC9O60706 1549 aa22.1■■□□□ 1.13
SHANK2-208ENST00000426687 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
SHANK2-208ENST00000426687 CCDC180Q9P1Z9 1646 aa21.24■□□□□ 0.99
SHANK2-208ENST00000426687 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
SHANK2-208ENST00000426687 DNAJC5Q9H3Z4 198 aa20.58■□□□□ 0.89
SHANK2-208ENST00000426687 PABPN1Q86U42 306 aaKnown RBP eCLIP20.36■□□□□ 0.85
SHANK2-208ENST00000426687 NACADO15069 1562 aa20.31■□□□□ 0.84
SHANK2-208ENST00000426687 UNC13AQ9UPW8 1703 aa20.13■□□□□ 0.81
SHANK2-208ENST00000426687 BICRAQ9NZM4 1560 aa20.1■□□□□ 0.81
SHANK2-208ENST00000426687 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
SHANK2-208ENST00000426687 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
SHANK2-208ENST00000426687 SHROOM4Q9ULL8 1493 aa19.85■□□□□ 0.77
SHANK2-208ENST00000426687 MYO15BQ96JP2 1530 aa19.77■□□□□ 0.76
SHANK2-208ENST00000426687 DCAF8L2P0C7V8 631 aa19.76■□□□□ 0.75
SHANK2-208ENST00000426687 EIF4G1Q04637 1599 aaKnown RBP19.69■□□□□ 0.74
SHANK2-208ENST00000426687 CUX2O14529 1486 aa19.54■□□□□ 0.72
SHANK2-208ENST00000426687 SCRIBQ14160 1630 aa19.2■□□□□ 0.66
SHANK2-208ENST00000426687 ERCC6Q03468 1493 aa19.16■□□□□ 0.66
SHANK2-208ENST00000426687 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
SHANK2-208ENST00000426687 DCAF1Q9Y4B6 1507 aa19.14■□□□□ 0.65
SHANK2-208ENST00000426687 ZCCHC6Q5VYS8 1495 aaKnown RBP19.02■□□□□ 0.63
SHANK2-208ENST00000426687 THOC2Q8NI27 1593 aaKnown RBP18.78■□□□□ 0.6
SHANK2-208ENST00000426687 NCAPD3P42695 1498 aa18.77■□□□□ 0.59
SHANK2-208ENST00000426687 NESP48681 1621 aa18.71■□□□□ 0.58
SHANK2-208ENST00000426687 HMGXB3Q12766 1538 aa18.55■□□□□ 0.56
SHANK2-208ENST00000426687 ATAD2BQ9ULI0 1458 aa18.54■□□□□ 0.56
SHANK2-208ENST00000426687 SMARCA2P51531 1590 aa18.53■□□□□ 0.56
SHANK2-208ENST00000426687 LAMC3Q9Y6N6 1575 aa18.48■□□□□ 0.55
SHANK2-208ENST00000426687 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
SHANK2-208ENST00000426687 KIF21AQ7Z4S6 1674 aa18.43■□□□□ 0.54
SHANK2-208ENST00000426687 PDS5BQ9NTI5 1447 aa18.4■□□□□ 0.54
SHANK2-208ENST00000426687 OSCARQ8IYS5 282 aa18.39■□□□□ 0.53
SHANK2-208ENST00000426687 WDR62O43379 1518 aa18.32■□□□□ 0.52
SHANK2-208ENST00000426687 MRC2Q9UBG0 1479 aa18.31■□□□□ 0.52
SHANK2-208ENST00000426687 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
SHANK2-208ENST00000426687 RIMBP3CA6NJZ7 1639 aa18.29■□□□□ 0.52
SHANK2-208ENST00000426687 RIMBP3BA6NNM3 1639 aa18.29■□□□□ 0.52
SHANK2-208ENST00000426687 RIMBP3Q9UFD9 1639 aa18.29■□□□□ 0.52
SHANK2-208ENST00000426687 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
SHANK2-208ENST00000426687 SMARCA4P51532 1647 aa18.27■□□□□ 0.51
SHANK2-208ENST00000426687 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
SHANK2-208ENST00000426687 ARHGEF11O15085 1522 aa18.16■□□□□ 0.5
SHANK2-208ENST00000426687 CADPSQ9ULU8 1353 aa18.11■□□□□ 0.49
SHANK2-208ENST00000426687 TRHP20396 242 aaPredicted RBP18.08■□□□□ 0.48
SHANK2-208ENST00000426687 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
SHANK2-208ENST00000426687 CYB5RLQ6IPT4 315 aa17.98■□□□□ 0.47
SHANK2-208ENST00000426687 ARAP1Q96P48 1450 aa17.91■□□□□ 0.46
SHANK2-208ENST00000426687 FANCD2Q9BXW9 1451 aa17.91■□□□□ 0.46
SHANK2-208ENST00000426687 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
SHANK2-208ENST00000426687 MROH2BQ7Z745 1585 aa17.8■□□□□ 0.44
SHANK2-208ENST00000426687 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
SHANK2-208ENST00000426687 ZNF608Q9ULD9 1512 aaPredicted RBP17.74■□□□□ 0.43
SHANK2-208ENST00000426687 CFTRP13569 1480 aa17.73■□□□□ 0.43
SHANK2-208ENST00000426687 IFT140Q96RY7 1462 aa17.71■□□□□ 0.43
SHANK2-208ENST00000426687 ILDR1Q86SU0 546 aaPredicted RBP17.7■□□□□ 0.42
SHANK2-208ENST00000426687 EIF4G3O43432 1585 aaKnown RBP17.62■□□□□ 0.41
SHANK2-208ENST00000426687 CHD1O14646 1710 aa17.62■□□□□ 0.41
SHANK2-208ENST00000426687 WIZO95785 1651 aa17.51■□□□□ 0.39
SHANK2-208ENST00000426687 CLASP1Q7Z460 1538 aa17.48■□□□□ 0.39
SHANK2-208ENST00000426687 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
SHANK2-208ENST00000426687 FBLN2P98095 1184 aa17.43■□□□□ 0.38
SHANK2-208ENST00000426687 AQRO60306 1485 aaKnown RBP eCLIP17.43■□□□□ 0.38
SHANK2-208ENST00000426687 PRDM2Q13029 1718 aa17.42■□□□□ 0.38
SHANK2-208ENST00000426687 TARBP1Q13395 1621 aaKnown RBP17.39■□□□□ 0.37
SHANK2-208ENST00000426687 ABCC8Q09428 1581 aa17.38■□□□□ 0.37
SHANK2-208ENST00000426687 SYNJ1O43426 1573 aa17.35■□□□□ 0.37
SHANK2-208ENST00000426687 GAPVD1Q14C86 1478 aa17.34■□□□□ 0.37
SHANK2-208ENST00000426687 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
SHANK2-208ENST00000426687 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
SHANK2-208ENST00000426687 SNAPC4Q5SXM2 1469 aa17.26■□□□□ 0.35
SHANK2-208ENST00000426687 KDM4FA0A1W2PPD8 638 aa17.25■□□□□ 0.35
SHANK2-208ENST00000426687 POLA1P09884 1462 aaPredicted RBP17.23■□□□□ 0.35
SHANK2-208ENST00000426687 MAGI1Q96QZ7 1491 aaPredicted RBP17.21■□□□□ 0.35
SHANK2-208ENST00000426687 WDR97A6NE52 1622 aa17.21■□□□□ 0.35
SHANK2-208ENST00000426687 CHMP7Q8WUX9 453 aaPredicted RBP17.2■□□□□ 0.34
SHANK2-208ENST00000426687 KIF13AQ9H1H9 1805 aa17.18■□□□□ 0.34
SHANK2-208ENST00000426687 SYNJ2O15056 1496 aa17.17■□□□□ 0.34
SHANK2-208ENST00000426687 TDRD9Q8NDG6 1382 aaKnown RBP17.16■□□□□ 0.34
SHANK2-208ENST00000426687 RAD54L2Q9Y4B4 1467 aa17.13■□□□□ 0.33
SHANK2-208ENST00000426687 SOGA1O94964 1423 aa17.09■□□□□ 0.33
SHANK2-208ENST00000426687 GRIN2BQ13224 1484 aa17.09■□□□□ 0.33
SHANK2-208ENST00000426687 ERCC6L2Q5T890 1561 aa17.09■□□□□ 0.33
SHANK2-208ENST00000426687 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
SHANK2-208ENST00000426687 ABCC10Q5T3U5 1492 aa17.01■□□□□ 0.31
SHANK2-208ENST00000426687 KDM6BO15054 1643 aa17.01■□□□□ 0.31
SHANK2-208ENST00000426687 HECW2Q9P2P5 1572 aa17■□□□□ 0.31
SHANK2-208ENST00000426687 FBXO41Q8TF61 875 aa16.97■□□□□ 0.31
SHANK2-208ENST00000426687 CEP170Q5SW79 1584 aa16.97■□□□□ 0.31
SHANK2-208ENST00000426687 FGD5Q6ZNL6 1462 aa16.96■□□□□ 0.31
SHANK2-208ENST00000426687 FAM69CQ0P6D2 419 aa16.95■□□□□ 0.3
SHANK2-208ENST00000426687 DIP2BQ9P265 1576 aa16.94■□□□□ 0.3
SHANK2-208ENST00000426687 PBRM1Q86U86 1689 aa16.92■□□□□ 0.3
SHANK2-208ENST00000426687 ADGRL1O94910 1474 aa16.92■□□□□ 0.3
SHANK2-208ENST00000426687 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
SHANK2-208ENST00000426687 MAPKBP1O60336 1514 aa16.91■□□□□ 0.3
SHANK2-208ENST00000426687 NUP160Q12769 1436 aa16.88■□□□□ 0.29
SHANK2-208ENST00000426687 GRIN2AQ12879 1464 aa16.87■□□□□ 0.29
SHANK2-208ENST00000426687 LMTK3Q96Q04 1460 aa16.83■□□□□ 0.28
SHANK2-208ENST00000426687 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms