RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 NISCHQ9Y2I1 1504 aa25.58■■□□□ 1.69
FOXN3-201ENST00000261302 CCDC180Q9P1Z9 1646 aa22.75■■□□□ 1.23
FOXN3-201ENST00000261302 ABCC9O60706 1549 aa22.06■■□□□ 1.12
FOXN3-201ENST00000261302 PELP1Q8IZL8 1130 aaKnown RBP21.81■■□□□ 1.08
FOXN3-201ENST00000261302 HRCP23327 699 aa21.59■■□□□ 1.05
FOXN3-201ENST00000261302 ZCCHC6Q5VYS8 1495 aaKnown RBP21.34■■□□□ 1.01
FOXN3-201ENST00000261302 NACADO15069 1562 aa21.34■■□□□ 1.01
FOXN3-201ENST00000261302 RB1CC1Q8TDY2 1594 aa21.33■■□□□ 1.01
FOXN3-201ENST00000261302 MYO15BQ96JP2 1530 aa21.28■■□□□ 1
FOXN3-201ENST00000261302 DCAF1Q9Y4B6 1507 aa21.22■□□□□ 0.99
FOXN3-201ENST00000261302 DCAF8L2P0C7V8 631 aa21.19■□□□□ 0.98
FOXN3-201ENST00000261302 MYT1Q01538 1121 aa21.19■□□□□ 0.98
FOXN3-201ENST00000261302 PPARGC1BQ86YN6 1023 aaKnown RBP20.91■□□□□ 0.94
FOXN3-201ENST00000261302 UNC13AQ9UPW8 1703 aa20.85■□□□□ 0.93
FOXN3-201ENST00000261302 PCGF6Q9BYE7 350 aa20.69■□□□□ 0.9
FOXN3-201ENST00000261302 SCRIBQ14160 1630 aa20.69■□□□□ 0.9
FOXN3-201ENST00000261302 BICRAQ9NZM4 1560 aa20.68■□□□□ 0.9
FOXN3-201ENST00000261302 SCAF1Q9H7N4 1312 aaKnown RBP20.67■□□□□ 0.9
FOXN3-201ENST00000261302 PABPN1Q86U42 306 aaKnown RBP eCLIP20.6■□□□□ 0.89
FOXN3-201ENST00000261302 SHROOM4Q9ULL8 1493 aa20.52■□□□□ 0.88
FOXN3-201ENST00000261302 ZEB1P37275 1124 aaPredicted RBP20.15■□□□□ 0.82
FOXN3-201ENST00000261302 DNAJC5BQ9UF47 199 aa20.14■□□□□ 0.82
FOXN3-201ENST00000261302 TTBK1Q5TCY1 1321 aaPredicted RBP20.12■□□□□ 0.81
FOXN3-201ENST00000261302 EIF4G1Q04637 1599 aaKnown RBP20.12■□□□□ 0.81
FOXN3-201ENST00000261302 CHIC1Q5VXU3 224 aa20.1■□□□□ 0.81
FOXN3-201ENST00000261302 SUPT5HO00267 1087 aaKnown RBP20.04■□□□□ 0.8
FOXN3-201ENST00000261302 ACIN1Q9UKV3 1341 aaKnown RBP20.04■□□□□ 0.8
FOXN3-201ENST00000261302 TRIM26Q12899 539 aaPredicted RBP20.04■□□□□ 0.8
FOXN3-201ENST00000261302 CC2D2AQ9P2K1 1620 aa20.01■□□□□ 0.79
FOXN3-201ENST00000261302 CECR2Q9BXF3 1484 aa19.88■□□□□ 0.77
FOXN3-201ENST00000261302 NEUROD1Q13562 356 aa19.88■□□□□ 0.77
FOXN3-201ENST00000261302 SMARCA4P51532 1647 aa19.83■□□□□ 0.77
FOXN3-201ENST00000261302 BAZ1AQ9NRL2 1556 aaPredicted RBP19.83■□□□□ 0.76
FOXN3-201ENST00000261302 GTF3C3Q9Y5Q9 886 aa19.81■□□□□ 0.76
FOXN3-201ENST00000261302 MROH2BQ7Z745 1585 aa19.69■□□□□ 0.74
FOXN3-201ENST00000261302 CENPBP07199 599 aaPredicted RBP19.69■□□□□ 0.74
FOXN3-201ENST00000261302 ATAD2BQ9ULI0 1458 aa19.69■□□□□ 0.74
FOXN3-201ENST00000261302 SMARCA2P51531 1590 aa19.69■□□□□ 0.74
FOXN3-201ENST00000261302 NCAPD3P42695 1498 aa19.68■□□□□ 0.74
FOXN3-201ENST00000261302 PEG3Q9GZU2 1588 aa19.67■□□□□ 0.74
FOXN3-201ENST00000261302 HMGXB3Q12766 1538 aa19.61■□□□□ 0.73
FOXN3-201ENST00000261302 LOC105371045A0A1W2PR82 267 aa19.56■□□□□ 0.72
FOXN3-201ENST00000261302 BCL11AQ9H165 835 aa19.54■□□□□ 0.72
FOXN3-201ENST00000261302 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
FOXN3-201ENST00000261302 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
FOXN3-201ENST00000261302 WIZO95785 1651 aa19.49■□□□□ 0.71
FOXN3-201ENST00000261302 FAM9AQ8IZU1 332 aaPredicted RBP19.35■□□□□ 0.69
FOXN3-201ENST00000261302 DIEXFQ68CQ4 756 aaKnown RBP19.33■□□□□ 0.68
FOXN3-201ENST00000261302 TOP2AP11388 1531 aaKnown RBP19.31■□□□□ 0.68
FOXN3-201ENST00000261302 ANP32EQ9BTT0 268 aa19.23■□□□□ 0.67
FOXN3-201ENST00000261302 PRKCSHP14314 528 aaPredicted RBP19.19■□□□□ 0.66
FOXN3-201ENST00000261302 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
FOXN3-201ENST00000261302 NESP48681 1621 aa19.13■□□□□ 0.65
FOXN3-201ENST00000261302 CADPSQ9ULU8 1353 aa19.08■□□□□ 0.65
FOXN3-201ENST00000261302 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
FOXN3-201ENST00000261302 CCDC88BA6NC98 1476 aa19.06■□□□□ 0.64
FOXN3-201ENST00000261302 CFTRP13569 1480 aa19.01■□□□□ 0.63
FOXN3-201ENST00000261302 ERCC6Q03468 1493 aa19.01■□□□□ 0.63
FOXN3-201ENST00000261302 PDS5BQ9NTI5 1447 aa18.99■□□□□ 0.63
FOXN3-201ENST00000261302 CCER1Q8TC90 406 aaPredicted RBP18.99■□□□□ 0.63
FOXN3-201ENST00000261302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.97■□□□□ 0.63
FOXN3-201ENST00000261302 CSRNP3Q8WYN3 585 aa18.96■□□□□ 0.63
FOXN3-201ENST00000261302 KIF21AQ7Z4S6 1674 aa18.94■□□□□ 0.62
FOXN3-201ENST00000261302 CLSPNQ9HAW4 1339 aa18.94■□□□□ 0.62
FOXN3-201ENST00000261302 PRDM2Q13029 1718 aa18.92■□□□□ 0.62
FOXN3-201ENST00000261302 YTHDC1Q96MU7 727 aaKnown RBP18.91■□□□□ 0.62
FOXN3-201ENST00000261302 ERICH6Q7L0X2 663 aa18.89■□□□□ 0.61
FOXN3-201ENST00000261302 THOC2Q8NI27 1593 aaKnown RBP18.88■□□□□ 0.61
FOXN3-201ENST00000261302 ZNF316A6NFI3 1004 aaPredicted RBP18.87■□□□□ 0.61
FOXN3-201ENST00000261302 TSHZ2Q9NRE2 1034 aa18.87■□□□□ 0.61
FOXN3-201ENST00000261302 FANCD2Q9BXW9 1451 aa18.86■□□□□ 0.61
FOXN3-201ENST00000261302 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
FOXN3-201ENST00000261302 CUX2O14529 1486 aa18.83■□□□□ 0.61
FOXN3-201ENST00000261302 MRC2Q9UBG0 1479 aa18.8■□□□□ 0.6
FOXN3-201ENST00000261302 SUPT16HQ9Y5B9 1047 aaKnown RBP18.78■□□□□ 0.6
FOXN3-201ENST00000261302 WDR62O43379 1518 aa18.76■□□□□ 0.59
FOXN3-201ENST00000261302 MIER1Q8N108 512 aa18.75■□□□□ 0.59
FOXN3-201ENST00000261302 APLP2Q06481 763 aa18.71■□□□□ 0.59
FOXN3-201ENST00000261302 URB2Q14146 1524 aaKnown RBP18.68■□□□□ 0.58
FOXN3-201ENST00000261302 ABCC8Q09428 1581 aa18.61■□□□□ 0.57
FOXN3-201ENST00000261302 DNMBPQ6XZF7 1577 aa18.59■□□□□ 0.57
FOXN3-201ENST00000261302 TOPBP1Q92547 1522 aa18.58■□□□□ 0.57
FOXN3-201ENST00000261302 CUX1P39880 1505 aa18.48■□□□□ 0.55
FOXN3-201ENST00000261302 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
FOXN3-201ENST00000261302 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
FOXN3-201ENST00000261302 TARBP1Q13395 1621 aaKnown RBP18.4■□□□□ 0.54
FOXN3-201ENST00000261302 FGD5Q6ZNL6 1462 aa18.39■□□□□ 0.53
FOXN3-201ENST00000261302 WRNQ14191 1432 aaPredicted RBP eCLIP18.38■□□□□ 0.53
FOXN3-201ENST00000261302 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
FOXN3-201ENST00000261302 TOP2BQ02880 1626 aa18.36■□□□□ 0.53
FOXN3-201ENST00000261302 RBM19Q9Y4C8 960 aaKnown RBP18.35■□□□□ 0.53
FOXN3-201ENST00000261302 SYNJ1O43426 1573 aa18.35■□□□□ 0.53
FOXN3-201ENST00000261302 SOGA1O94964 1423 aa18.33■□□□□ 0.53
FOXN3-201ENST00000261302 ZNF608Q9ULD9 1512 aaPredicted RBP18.33■□□□□ 0.52
FOXN3-201ENST00000261302 RAD54L2Q9Y4B4 1467 aa18.32■□□□□ 0.52
FOXN3-201ENST00000261302 WDR97A6NE52 1622 aa18.3■□□□□ 0.52
FOXN3-201ENST00000261302 EIF4G3O43432 1585 aaKnown RBP18.3■□□□□ 0.52
FOXN3-201ENST00000261302 MYT1LQ9UL68 1186 aa18.29■□□□□ 0.52
FOXN3-201ENST00000261302 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
FOXN3-201ENST00000261302 ABCA10Q8WWZ4 1543 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms