RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 NISCHQ9Y2I1 1504 aa37.77■■■■□ 3.64
CDKN1A-202ENST00000373711 ABCC9O60706 1549 aa34.51■■■■□ 3.12
CDKN1A-202ENST00000373711 CCDC180Q9P1Z9 1646 aa34.25■■■■□ 3.07
CDKN1A-202ENST00000373711 RB1CC1Q8TDY2 1594 aa32.79■■■□□ 2.84
CDKN1A-202ENST00000373711 DNAJC5BQ9UF47 199 aa32.61■■■□□ 2.81
CDKN1A-202ENST00000373711 NACADO15069 1562 aa32.44■■■□□ 2.78
CDKN1A-202ENST00000373711 UNC13AQ9UPW8 1703 aa32.03■■■□□ 2.72
CDKN1A-202ENST00000373711 DCAF8L2P0C7V8 631 aa32■■■□□ 2.71
CDKN1A-202ENST00000373711 PABPN1Q86U42 306 aaKnown RBP eCLIP31.97■■■□□ 2.71
CDKN1A-202ENST00000373711 MYO15BQ96JP2 1530 aa31.85■■■□□ 2.69
CDKN1A-202ENST00000373711 BICRAQ9NZM4 1560 aa31.72■■■□□ 2.67
CDKN1A-202ENST00000373711 SHROOM4Q9ULL8 1493 aa31.44■■■□□ 2.62
CDKN1A-202ENST00000373711 DCAF1Q9Y4B6 1507 aa31.25■■■□□ 2.59
CDKN1A-202ENST00000373711 ZCCHC6Q5VYS8 1495 aaKnown RBP31.22■■■□□ 2.59
CDKN1A-202ENST00000373711 CC2D2AQ9P2K1 1620 aa31.21■■■□□ 2.59
CDKN1A-202ENST00000373711 CECR2Q9BXF3 1484 aa31.18■■■□□ 2.58
CDKN1A-202ENST00000373711 SCRIBQ14160 1630 aa31.06■■■□□ 2.56
CDKN1A-202ENST00000373711 EIF4G1Q04637 1599 aaKnown RBP31.05■■■□□ 2.56
CDKN1A-202ENST00000373711 DNAJC5Q9H3Z4 198 aa30.43■■■□□ 2.46
CDKN1A-202ENST00000373711 CUX2O14529 1486 aa30.06■■■□□ 2.4
CDKN1A-202ENST00000373711 ERCC6Q03468 1493 aa29.93■■■□□ 2.38
CDKN1A-202ENST00000373711 NCAPD3P42695 1498 aa29.87■■■□□ 2.37
CDKN1A-202ENST00000373711 SMARCA2P51531 1590 aa29.7■■■□□ 2.35
CDKN1A-202ENST00000373711 ATAD2BQ9ULI0 1458 aa29.69■■■□□ 2.34
CDKN1A-202ENST00000373711 HMGXB3Q12766 1538 aa29.69■■■□□ 2.34
CDKN1A-202ENST00000373711 SMARCA4P51532 1647 aa29.61■■■□□ 2.33
CDKN1A-202ENST00000373711 NESP48681 1621 aa29.47■■■□□ 2.31
CDKN1A-202ENST00000373711 BAZ1BQ9UIG0 1483 aaKnown RBP29.44■■■□□ 2.3
CDKN1A-202ENST00000373711 BAZ1AQ9NRL2 1556 aaPredicted RBP29.43■■■□□ 2.3
CDKN1A-202ENST00000373711 THOC2Q8NI27 1593 aaKnown RBP29.39■■■□□ 2.29
CDKN1A-202ENST00000373711 LAMC3Q9Y6N6 1575 aa29.36■■■□□ 2.29
CDKN1A-202ENST00000373711 PEG3Q9GZU2 1588 aa29.34■■■□□ 2.29
CDKN1A-202ENST00000373711 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
CDKN1A-202ENST00000373711 PDS5BQ9NTI5 1447 aa29.18■■■□□ 2.26
CDKN1A-202ENST00000373711 MROH2BQ7Z745 1585 aa29.05■■■□□ 2.24
CDKN1A-202ENST00000373711 MRC2Q9UBG0 1479 aa28.93■■■□□ 2.22
CDKN1A-202ENST00000373711 CADPSQ9ULU8 1353 aa28.93■■■□□ 2.22
CDKN1A-202ENST00000373711 TRIM41Q8WV44 630 aa28.9■■■□□ 2.22
CDKN1A-202ENST00000373711 WDR62O43379 1518 aa28.89■■■□□ 2.21
CDKN1A-202ENST00000373711 CEP164Q9UPV0 1460 aa28.74■■■□□ 2.19
CDKN1A-202ENST00000373711 WIZO95785 1651 aa28.72■■■□□ 2.19
CDKN1A-202ENST00000373711 FANCD2Q9BXW9 1451 aa28.62■■■□□ 2.17
CDKN1A-202ENST00000373711 OSCARQ8IYS5 282 aa28.52■■■□□ 2.16
CDKN1A-202ENST00000373711 CFTRP13569 1480 aa28.52■■■□□ 2.16
CDKN1A-202ENST00000373711 PRDM2Q13029 1718 aa28.38■■■□□ 2.13
CDKN1A-202ENST00000373711 TOP2AP11388 1531 aaKnown RBP28.38■■■□□ 2.13
CDKN1A-202ENST00000373711 URB2Q14146 1524 aaKnown RBP28.38■■■□□ 2.13
CDKN1A-202ENST00000373711 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.12
CDKN1A-202ENST00000373711 RIMBP3CA6NJZ7 1639 aa28.25■■■□□ 2.11
CDKN1A-202ENST00000373711 RIMBP3BA6NNM3 1639 aa28.25■■■□□ 2.11
CDKN1A-202ENST00000373711 RIMBP3Q9UFD9 1639 aa28.25■■■□□ 2.11
CDKN1A-202ENST00000373711 IFT140Q96RY7 1462 aa28.19■■■□□ 2.1
CDKN1A-202ENST00000373711 ARHGEF11O15085 1522 aa28.09■■■□□ 2.09
CDKN1A-202ENST00000373711 ZNF608Q9ULD9 1512 aaPredicted RBP28.08■■■□□ 2.08
CDKN1A-202ENST00000373711 ABCC8Q09428 1581 aa28.04■■■□□ 2.08
CDKN1A-202ENST00000373711 TOPBP1Q92547 1522 aa28.02■■■□□ 2.08
CDKN1A-202ENST00000373711 EIF4G3O43432 1585 aaKnown RBP28.01■■■□□ 2.07
CDKN1A-202ENST00000373711 CCDC88BA6NC98 1476 aa27.97■■■□□ 2.07
CDKN1A-202ENST00000373711 DNMBPQ6XZF7 1577 aa27.94■■■□□ 2.06
CDKN1A-202ENST00000373711 CHD1O14646 1710 aa27.91■■■□□ 2.06
CDKN1A-202ENST00000373711 CYB5RLQ6IPT4 315 aa27.83■■■□□ 2.05
CDKN1A-202ENST00000373711 TARBP1Q13395 1621 aaKnown RBP27.82■■■□□ 2.04
CDKN1A-202ENST00000373711 AQRO60306 1485 aaKnown RBP eCLIP27.76■■■□□ 2.034e-7■■■■■ 34
CDKN1A-202ENST00000373711 ARAP1Q96P48 1450 aa27.75■■■□□ 2.03
CDKN1A-202ENST00000373711 TRHP20396 242 aaPredicted RBP27.73■■■□□ 2.03
CDKN1A-202ENST00000373711 FBLN2P98095 1184 aa27.7■■■□□ 2.02
CDKN1A-202ENST00000373711 POLA1P09884 1462 aaPredicted RBP27.7■■■□□ 2.02
CDKN1A-202ENST00000373711 WDR97A6NE52 1622 aa27.66■■■□□ 2.02
CDKN1A-202ENST00000373711 SOGA1O94964 1423 aa27.56■■■□□ 2
CDKN1A-202ENST00000373711 SYNJ1O43426 1573 aa27.56■■■□□ 2
CDKN1A-202ENST00000373711 RAD54L2Q9Y4B4 1467 aa27.54■■■□□ 2
CDKN1A-202ENST00000373711 CLASP1Q7Z460 1538 aa27.53■■■□□ 2
CDKN1A-202ENST00000373711 SNAPC4Q5SXM2 1469 aa27.53■■■□□ 2
CDKN1A-202ENST00000373711 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■□□□ 1.99
CDKN1A-202ENST00000373711 TDRD9Q8NDG6 1382 aaKnown RBP27.5■■□□□ 1.99
CDKN1A-202ENST00000373711 FGD5Q6ZNL6 1462 aa27.46■■□□□ 1.99
CDKN1A-202ENST00000373711 CHMP7Q8WUX9 453 aaPredicted RBP27.46■■□□□ 1.99
CDKN1A-202ENST00000373711 GRIN2BQ13224 1484 aa27.43■■□□□ 1.98
CDKN1A-202ENST00000373711 SYNJ2O15056 1496 aa27.38■■□□□ 1.97
CDKN1A-202ENST00000373711 PBRM1Q86U86 1689 aa27.35■■□□□ 1.97
CDKN1A-202ENST00000373711 CUX1P39880 1505 aa27.34■■□□□ 1.97
CDKN1A-202ENST00000373711 AEBP2Q6ZN18 517 aaPredicted RBP27.33■■□□□ 1.97
CDKN1A-202ENST00000373711 GAPVD1Q14C86 1478 aa27.25■■□□□ 1.95
CDKN1A-202ENST00000373711 ABCA5Q8WWZ7 1642 aa27.18■■□□□ 1.94
CDKN1A-202ENST00000373711 ABCA10Q8WWZ4 1543 aa27.16■■□□□ 1.94
CDKN1A-202ENST00000373711 GRIN2AQ12879 1464 aa27.06■■□□□ 1.92
CDKN1A-202ENST00000373711 ADAMTS12P58397 1594 aa27.01■■□□□ 1.92
CDKN1A-202ENST00000373711 CEP170Q5SW79 1584 aa26.99■■□□□ 1.91
CDKN1A-202ENST00000373711 ERCC6L2Q5T890 1561 aa26.97■■□□□ 1.91
CDKN1A-202ENST00000373711 NUP160Q12769 1436 aa26.97■■□□□ 1.91
CDKN1A-202ENST00000373711 WRNQ14191 1432 aaPredicted RBP eCLIP26.96■■□□□ 1.91
CDKN1A-202ENST00000373711 SHROOM2Q13796 1616 aa26.94■■□□□ 1.9
CDKN1A-202ENST00000373711 FHAD1B1AJZ9 1412 aa26.9■■□□□ 1.9
CDKN1A-202ENST00000373711 BIVM-ERCC5R4GMW8 1640 aa26.88■■□□□ 1.89
CDKN1A-202ENST00000373711 KIF13AQ9H1H9 1805 aa26.86■■□□□ 1.89
CDKN1A-202ENST00000373711 TOP2BQ02880 1626 aa26.85■■□□□ 1.89
CDKN1A-202ENST00000373711 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
CDKN1A-202ENST00000373711 PRG4Q92954 1404 aaPredicted RBP26.73■■□□□ 1.87
CDKN1A-202ENST00000373711 JPH4Q96JJ6 628 aa26.65■■□□□ 1.86
CDKN1A-202ENST00000373711 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms