RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 MYT1Q01538 1121 aa19.75■□□□□ 0.75
SHANK2-211ENST00000449833 PELP1Q8IZL8 1130 aaKnown RBP19.6■□□□□ 0.73
SHANK2-211ENST00000449833 DCAF8L2P0C7V8 631 aa18.67■□□□□ 0.58
SHANK2-211ENST00000449833 CCER1Q8TC90 406 aaPredicted RBP18.54■□□□□ 0.56
SHANK2-211ENST00000449833 TTBK1Q5TCY1 1321 aaPredicted RBP18.46■□□□□ 0.55
SHANK2-211ENST00000449833 ERICH6Q7L0X2 663 aa18.44■□□□□ 0.54
SHANK2-211ENST00000449833 YTHDC1Q96MU7 727 aaKnown RBP18.3■□□□□ 0.52
SHANK2-211ENST00000449833 CENPBP07199 599 aaPredicted RBP18.15■□□□□ 0.5
SHANK2-211ENST00000449833 SUPT5HO00267 1087 aaKnown RBP17.95■□□□□ 0.46
SHANK2-211ENST00000449833 APLP2Q06481 763 aa17.75■□□□□ 0.43
SHANK2-211ENST00000449833 ZEB1P37275 1124 aaPredicted RBP17.69■□□□□ 0.42
SHANK2-211ENST00000449833 EHMT2Q96KQ7 1210 aa17.63■□□□□ 0.41
SHANK2-211ENST00000449833 NEFLP07196 543 aa17.58■□□□□ 0.4
SHANK2-211ENST00000449833 FAM9AQ8IZU1 332 aaPredicted RBP17.43■□□□□ 0.38
SHANK2-211ENST00000449833 PCGF6Q9BYE7 350 aa17.4■□□□□ 0.38
SHANK2-211ENST00000449833 SHROOM4Q9ULL8 1493 aa17.38■□□□□ 0.37
SHANK2-211ENST00000449833 DAXXQ9UER7 740 aaPredicted RBP17.36■□□□□ 0.37
SHANK2-211ENST00000449833 GLIPR1L2Q4G1C9 344 aa17.26■□□□□ 0.35
SHANK2-211ENST00000449833 RTL5Q5HYW3 569 aaPredicted RBP17.23■□□□□ 0.35
SHANK2-211ENST00000449833 NISCHQ9Y2I1 1504 aa16.95■□□□□ 0.3
SHANK2-211ENST00000449833 ZNF316A6NFI3 1004 aaPredicted RBP16.87■□□□□ 0.29
SHANK2-211ENST00000449833 MYT1LQ9UL68 1186 aa16.85■□□□□ 0.29
SHANK2-211ENST00000449833 ATP1B4Q9UN42 357 aaPredicted RBP16.81■□□□□ 0.28
SHANK2-211ENST00000449833 RANGAP1P46060 587 aaPredicted RBP16.78■□□□□ 0.28
SHANK2-211ENST00000449833 CLSPNQ9HAW4 1339 aa16.68■□□□□ 0.26
SHANK2-211ENST00000449833 TRIM41Q8WV44 630 aa16.68■□□□□ 0.26
SHANK2-211ENST00000449833 UBTFP17480 764 aaKnown RBP16.64■□□□□ 0.26
SHANK2-211ENST00000449833 TRIM26Q12899 539 aaPredicted RBP16.57■□□□□ 0.24
SHANK2-211ENST00000449833 EIF5BO60841 1220 aaKnown RBP16.57■□□□□ 0.24
SHANK2-211ENST00000449833 HRCP23327 699 aa16.54■□□□□ 0.24
SHANK2-211ENST00000449833 POLR3GLQ9BT43 218 aa16.46■□□□□ 0.23
SHANK2-211ENST00000449833 ANP32BQ92688 251 aaKnown RBP16.4■□□□□ 0.22
SHANK2-211ENST00000449833 CDK11AQ9UQ88 783 aaPredicted RBP16.37■□□□□ 0.21
SHANK2-211ENST00000449833 TNNT2P45379 298 aaPredicted RBP16.36■□□□□ 0.21
SHANK2-211ENST00000449833 PPARGC1BQ86YN6 1023 aaKnown RBP16.3■□□□□ 0.2
SHANK2-211ENST00000449833 DIEXFQ68CQ4 756 aaKnown RBP16.3■□□□□ 0.2
SHANK2-211ENST00000449833 ANP32AP39687 249 aaKnown RBP16.28■□□□□ 0.2
SHANK2-211ENST00000449833 SLC4A1APQ9BWU0 796 aaKnown RBP16.23■□□□□ 0.19
SHANK2-211ENST00000449833 CNGB1Q14028 1251 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-211ENST00000449833 ITGAEP38570 1179 aa16.2■□□□□ 0.18
SHANK2-211ENST00000449833 ZBTB47Q9UFB7 747 aaPredicted RBP16.2■□□□□ 0.18
SHANK2-211ENST00000449833 GTF3C3Q9Y5Q9 886 aa16.17■□□□□ 0.18
SHANK2-211ENST00000449833 NCLP19338 710 aaKnown RBP16.17■□□□□ 0.18
SHANK2-211ENST00000449833 TRIM44Q96DX7 344 aaPredicted RBP16.11■□□□□ 0.17
SHANK2-211ENST00000449833 CDK11BP21127 795 aaKnown RBP16.08■□□□□ 0.16
SHANK2-211ENST00000449833 BCANQ96GW7 911 aa16.06■□□□□ 0.16
SHANK2-211ENST00000449833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
SHANK2-211ENST00000449833 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
SHANK2-211ENST00000449833 ANP32CO43423 234 aa15.99■□□□□ 0.15
SHANK2-211ENST00000449833 CANXP27824 592 aaKnown RBP15.97■□□□□ 0.15
SHANK2-211ENST00000449833 CHIC1Q5VXU3 224 aa15.95■□□□□ 0.14
SHANK2-211ENST00000449833 ACIN1Q9UKV3 1341 aaKnown RBP15.93■□□□□ 0.14
SHANK2-211ENST00000449833 ANP32EQ9BTT0 268 aa15.9■□□□□ 0.14
SHANK2-211ENST00000449833 HSP90AA1P07900 732 aaKnown RBP15.87■□□□□ 0.13
SHANK2-211ENST00000449833 ERICH6BQ5W0A0 696 aa15.84■□□□□ 0.13
SHANK2-211ENST00000449833 NPM2Q86SE8 214 aaKnown RBP15.82■□□□□ 0.12
SHANK2-211ENST00000449833 UPF2Q9HAU5 1272 aaKnown RBP15.81■□□□□ 0.12
SHANK2-211ENST00000449833 NEFMP07197 916 aa15.79■□□□□ 0.12
SHANK2-211ENST00000449833 BCL11AQ9H165 835 aa15.78■□□□□ 0.12
SHANK2-211ENST00000449833 LOC105371045A0A1W2PR82 267 aa15.77■□□□□ 0.11
SHANK2-211ENST00000449833 FAM50AQ14320 339 aaKnown RBP15.77■□□□□ 0.11
SHANK2-211ENST00000449833 SLC24A1O60721 1099 aa15.76■□□□□ 0.11
SHANK2-211ENST00000449833 ZNF326Q5BKZ1 582 aaKnown RBP15.76■□□□□ 0.11
SHANK2-211ENST00000449833 NEUROD1Q13562 356 aa15.75■□□□□ 0.11
SHANK2-211ENST00000449833 TRIM52Q96A61 297 aa15.74■□□□□ 0.11
SHANK2-211ENST00000449833 NBR1Q14596 966 aa15.66■□□□□ 0.1
SHANK2-211ENST00000449833 PTMSP20962 102 aa15.64■□□□□ 0.09
SHANK2-211ENST00000449833 DDRGK1Q96HY6 314 aa15.58■□□□□ 0.08
SHANK2-211ENST00000449833 FKBP8Q14318 412 aa15.57■□□□□ 0.08
SHANK2-211ENST00000449833 NAP1L5Q96NT1 182 aaPredicted RBP15.55■□□□□ 0.08
SHANK2-211ENST00000449833 ARXQ96QS3 562 aa15.54■□□□□ 0.08
SHANK2-211ENST00000449833 BECN1Q14457 450 aa15.48■□□□□ 0.07
SHANK2-211ENST00000449833 CALRP27797 417 aaKnown RBP15.47■□□□□ 0.07
SHANK2-211ENST00000449833 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.46■□□□□ 0.07
SHANK2-211ENST00000449833 GOLGA6L22H0YM25 854 aa15.46■□□□□ 0.07
SHANK2-211ENST00000449833 CCDC136Q96JN2 1154 aa15.44■□□□□ 0.06
SHANK2-211ENST00000449833 CHAF1AQ13111 956 aaPredicted RBP15.43■□□□□ 0.06
SHANK2-211ENST00000449833 DNTTIP2Q5QJE6 756 aaKnown RBP15.42■□□□□ 0.06
SHANK2-211ENST00000449833 PPM1GO15355 546 aaPredicted RBP15.41■□□□□ 0.06
SHANK2-211ENST00000449833 TNNT3P45378 269 aaPredicted RBP15.4■□□□□ 0.06
SHANK2-211ENST00000449833 HNRNPUQ00839 825 aaKnown RBP eCLIP15.38■□□□□ 0.05
SHANK2-211ENST00000449833 PTMAP06454 111 aaKnown RBP15.33■□□□□ 0.05
SHANK2-211ENST00000449833 MYH16Q9H6N6 1097 aa15.32■□□□□ 0.04
SHANK2-211ENST00000449833 GOLGA6L6A8MZA4 724 aa15.31■□□□□ 0.04
SHANK2-211ENST00000449833 L1TD1Q5T7N2 865 aaKnown RBP15.3■□□□□ 0.04
SHANK2-211ENST00000449833 SCAF1Q9H7N4 1312 aaKnown RBP15.28■□□□□ 0.04
SHANK2-211ENST00000449833 ZRSR1Q15695 479 aaKnown RBP15.28■□□□□ 0.04
SHANK2-211ENST00000449833 NRDCO43847 1150 aa15.27■□□□□ 0.04
SHANK2-211ENST00000449833 TONSLQ96HA7 1378 aa15.27■□□□□ 0.04
SHANK2-211ENST00000449833 FAM9BQ8IZU0 186 aa15.26■□□□□ 0.03
SHANK2-211ENST00000449833 MSNP26038 577 aaKnown RBP15.25■□□□□ 0.03
SHANK2-211ENST00000449833 RSPH6AQ9H0K4 717 aa15.24■□□□□ 0.03
SHANK2-211ENST00000449833 ARID4BQ4LE39 1312 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-211ENST00000449833 TMC1Q8TDI8 760 aa15.22■□□□□ 0.03
SHANK2-211ENST00000449833 USP35Q9P2H5 1018 aa15.2■□□□□ 0.02
SHANK2-211ENST00000449833 WDR43Q15061 677 aaKnown RBP eCLIP15.19■□□□□ 0.02
SHANK2-211ENST00000449833 SETQ01105 290 aaPredicted RBP15.19■□□□□ 0.02
SHANK2-211ENST00000449833 AMER1Q5JTC6 1135 aaPredicted RBP15.19■□□□□ 0.02
SHANK2-211ENST00000449833 NOP58Q9Y2X3 529 aaKnown RBP15.18■□□□□ 0.02
SHANK2-211ENST00000449833 A0A0U1RQG5 324 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms