RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 NISCHQ9Y2I1 1504 aa36.82■■■■□ 3.48
CDKN1A-204ENST00000448526 CCDC180Q9P1Z9 1646 aa31.57■■■□□ 2.65
CDKN1A-204ENST00000448526 ZCCHC6Q5VYS8 1495 aaKnown RBP31.07■■■□□ 2.56
CDKN1A-204ENST00000448526 SHROOM4Q9ULL8 1493 aa30.89■■■□□ 2.54
CDKN1A-204ENST00000448526 DCAF8L2P0C7V8 631 aa30.41■■■□□ 2.46
CDKN1A-204ENST00000448526 DCAF1Q9Y4B6 1507 aa30.28■■■□□ 2.44
CDKN1A-204ENST00000448526 SUPT5HO00267 1087 aaKnown RBP30.07■■■□□ 2.4
CDKN1A-204ENST00000448526 MYO15BQ96JP2 1530 aa29.57■■■□□ 2.32
CDKN1A-204ENST00000448526 ABCC9O60706 1549 aa29.46■■■□□ 2.31
CDKN1A-204ENST00000448526 SCRIBQ14160 1630 aa29.41■■■□□ 2.3
CDKN1A-204ENST00000448526 NACADO15069 1562 aa29.25■■■□□ 2.27
CDKN1A-204ENST00000448526 CHIC1Q5VXU3 224 aa29.12■■■□□ 2.25
CDKN1A-204ENST00000448526 RSF1Q96T23 1441 aaPredicted RBP28.94■■■□□ 2.22
CDKN1A-204ENST00000448526 RB1CC1Q8TDY2 1594 aa28.85■■■□□ 2.21
CDKN1A-204ENST00000448526 CECR2Q9BXF3 1484 aa28.71■■■□□ 2.19
CDKN1A-204ENST00000448526 MROH2BQ7Z745 1585 aa28.58■■■□□ 2.17
CDKN1A-204ENST00000448526 UNC13AQ9UPW8 1703 aa28.47■■■□□ 2.15
CDKN1A-204ENST00000448526 WIZO95785 1651 aa28.41■■■□□ 2.14
CDKN1A-204ENST00000448526 BAZ1AQ9NRL2 1556 aaPredicted RBP28.3■■■□□ 2.12
CDKN1A-204ENST00000448526 LOC105371045A0A1W2PR82 267 aa28.18■■■□□ 2.1
CDKN1A-204ENST00000448526 SMARCA4P51532 1647 aa28.14■■■□□ 2.09
CDKN1A-204ENST00000448526 BICRAQ9NZM4 1560 aa28.11■■■□□ 2.09
CDKN1A-204ENST00000448526 TRIM41Q8WV44 630 aa28.08■■■□□ 2.09
CDKN1A-204ENST00000448526 PABPN1Q86U42 306 aaKnown RBP eCLIP28.04■■■□□ 2.08
CDKN1A-204ENST00000448526 TOP2AP11388 1531 aaKnown RBP27.98■■■□□ 2.07
CDKN1A-204ENST00000448526 EIF4G1Q04637 1599 aaKnown RBP27.91■■■□□ 2.06
CDKN1A-204ENST00000448526 CCDC88BA6NC98 1476 aa27.82■■■□□ 2.04
CDKN1A-204ENST00000448526 SMARCA2P51531 1590 aa27.81■■■□□ 2.04
CDKN1A-204ENST00000448526 FAM9AQ8IZU1 332 aaPredicted RBP27.77■■■□□ 2.04
CDKN1A-204ENST00000448526 PCGF6Q9BYE7 350 aa27.67■■■□□ 2.02
CDKN1A-204ENST00000448526 PEG3Q9GZU2 1588 aa27.67■■■□□ 2.02
CDKN1A-204ENST00000448526 ABCC8Q09428 1581 aa27.57■■■□□ 2
CDKN1A-204ENST00000448526 ATAD2BQ9ULI0 1458 aa27.5■■□□□ 1.99
CDKN1A-204ENST00000448526 EHMT2Q96KQ7 1210 aa27.49■■□□□ 1.99
CDKN1A-204ENST00000448526 HRCP23327 699 aa27.43■■□□□ 1.98
CDKN1A-204ENST00000448526 BAZ1BQ9UIG0 1483 aaKnown RBP27.37■■□□□ 1.97
CDKN1A-204ENST00000448526 TRIM26Q12899 539 aaPredicted RBP27.31■■□□□ 1.96
CDKN1A-204ENST00000448526 SOGA1O94964 1423 aa27.22■■□□□ 1.95
CDKN1A-204ENST00000448526 WRNQ14191 1432 aaPredicted RBP eCLIP27.16■■□□□ 1.94
CDKN1A-204ENST00000448526 RUSC2Q8N2Y8 1516 aa27.12■■□□□ 1.93
CDKN1A-204ENST00000448526 SYNJ1O43426 1573 aa27.09■■□□□ 1.93
CDKN1A-204ENST00000448526 NCAPD3P42695 1498 aa27.06■■□□□ 1.92
CDKN1A-204ENST00000448526 EEA1Q15075 1411 aa27.05■■□□□ 1.92
CDKN1A-204ENST00000448526 HMGXB3Q12766 1538 aa27.04■■□□□ 1.92
CDKN1A-204ENST00000448526 CSRNP3Q8WYN3 585 aa27■■□□□ 1.91
CDKN1A-204ENST00000448526 TNIKQ9UKE5 1360 aa26.9■■□□□ 1.9
CDKN1A-204ENST00000448526 PPARGC1BQ86YN6 1023 aaKnown RBP26.9■■□□□ 1.9
CDKN1A-204ENST00000448526 CEP162Q5TB80 1403 aa26.89■■□□□ 1.89
CDKN1A-204ENST00000448526 TOP2BQ02880 1626 aa26.82■■□□□ 1.88
CDKN1A-204ENST00000448526 GOLGA3Q08378 1498 aa26.82■■□□□ 1.88
CDKN1A-204ENST00000448526 UBTFP17480 764 aaKnown RBP26.78■■□□□ 1.88
CDKN1A-204ENST00000448526 BIVM-ERCC5R4GMW8 1640 aa26.76■■□□□ 1.87
CDKN1A-204ENST00000448526 KIF21BO75037 1637 aa26.74■■□□□ 1.87
CDKN1A-204ENST00000448526 CEP164Q9UPV0 1460 aa26.72■■□□□ 1.87
CDKN1A-204ENST00000448526 CFTRP13569 1480 aa26.71■■□□□ 1.87
CDKN1A-204ENST00000448526 CUX1P39880 1505 aa26.65■■□□□ 1.86
CDKN1A-204ENST00000448526 CC2D2AQ9P2K1 1620 aa26.6■■□□□ 1.85
CDKN1A-204ENST00000448526 RAPGEF2Q9Y4G8 1499 aa26.59■■□□□ 1.85
CDKN1A-204ENST00000448526 PRDM2Q13029 1718 aa26.55■■□□□ 1.84
CDKN1A-204ENST00000448526 ZEB1P37275 1124 aaPredicted RBP26.5■■□□□ 1.83
CDKN1A-204ENST00000448526 TTBK1Q5TCY1 1321 aaPredicted RBP26.5■■□□□ 1.83
CDKN1A-204ENST00000448526 CLIP1P30622 1438 aa26.47■■□□□ 1.83
CDKN1A-204ENST00000448526 CADPSQ9ULU8 1353 aa26.47■■□□□ 1.83
CDKN1A-204ENST00000448526 PRXQ9BXM0 1461 aa26.42■■□□□ 1.82
CDKN1A-204ENST00000448526 ERICH3Q5RHP9 1530 aa26.38■■□□□ 1.81
CDKN1A-204ENST00000448526 KIF27Q86VH2 1401 aa26.36■■□□□ 1.81
CDKN1A-204ENST00000448526 VPS8Q8N3P4 1428 aa26.33■■□□□ 1.81
CDKN1A-204ENST00000448526 RANGAP1P46060 587 aaPredicted RBP26.3■■□□□ 1.8
CDKN1A-204ENST00000448526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.27■■□□□ 1.8
CDKN1A-204ENST00000448526 FANCD2Q9BXW9 1451 aa26.21■■□□□ 1.79
CDKN1A-204ENST00000448526 FGD5Q6ZNL6 1462 aa26.21■■□□□ 1.79
CDKN1A-204ENST00000448526 CUX2O14529 1486 aa26.2■■□□□ 1.79
CDKN1A-204ENST00000448526 NESP48681 1621 aa26.16■■□□□ 1.78
CDKN1A-204ENST00000448526 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
CDKN1A-204ENST00000448526 CCER1Q8TC90 406 aaPredicted RBP26.15■■□□□ 1.78
CDKN1A-204ENST00000448526 IGF1RP08069 1367 aa26.14■■□□□ 1.77
CDKN1A-204ENST00000448526 APLP2Q06481 763 aa26.06■■□□□ 1.76
CDKN1A-204ENST00000448526 DNMBPQ6XZF7 1577 aa26.05■■□□□ 1.76
CDKN1A-204ENST00000448526 TOPBP1Q92547 1522 aa26.02■■□□□ 1.76
CDKN1A-204ENST00000448526 CARMIL1Q5VZK9 1371 aa26■■□□□ 1.75
CDKN1A-204ENST00000448526 ARHGAP35Q9NRY4 1499 aa25.99■■□□□ 1.75
CDKN1A-204ENST00000448526 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
CDKN1A-204ENST00000448526 RAD54L2Q9Y4B4 1467 aa25.98■■□□□ 1.75
CDKN1A-204ENST00000448526 LAMC3Q9Y6N6 1575 aa25.97■■□□□ 1.75
CDKN1A-204ENST00000448526 POLA1P09884 1462 aaPredicted RBP25.97■■□□□ 1.75
CDKN1A-204ENST00000448526 HNRNPUL2Q1KMD3 747 aaKnown RBP25.93■■□□□ 1.74
CDKN1A-204ENST00000448526 ABCA10Q8WWZ4 1543 aa25.92■■□□□ 1.74
CDKN1A-204ENST00000448526 KANK4Q5T7N3 995 aaPredicted RBP25.89■■□□□ 1.74
CDKN1A-204ENST00000448526 URB2Q14146 1524 aaKnown RBP25.88■■□□□ 1.73
CDKN1A-204ENST00000448526 WDR97A6NE52 1622 aa25.78■■□□□ 1.72
CDKN1A-204ENST00000448526 PDS5BQ9NTI5 1447 aa25.77■■□□□ 1.72
CDKN1A-204ENST00000448526 KIF21AQ7Z4S6 1674 aa25.75■■□□□ 1.71
CDKN1A-204ENST00000448526 CUL7Q14999 1698 aa25.72■■□□□ 1.71
CDKN1A-204ENST00000448526 RRBP1Q9P2E9 1410 aaKnown RBP25.67■■□□□ 1.7
CDKN1A-204ENST00000448526 ABCA5Q8WWZ7 1642 aa25.66■■□□□ 1.7
CDKN1A-204ENST00000448526 TDRD9Q8NDG6 1382 aaKnown RBP25.66■■□□□ 1.7
CDKN1A-204ENST00000448526 TIAM1Q13009 1591 aa25.64■■□□□ 1.69
CDKN1A-204ENST00000448526 P3H3Q8IVL6 736 aa25.63■■□□□ 1.69
CDKN1A-204ENST00000448526 MAP3K1Q13233 1512 aa25.61■■□□□ 1.69
CDKN1A-204ENST00000448526 CTTNBP2Q8WZ74 1663 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms