RNA–Protein interactions for RNA: ENST00000034275.12

RANBP3-201, Transcript of RAN binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RANBP3, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-201ENST00000034275 NISCHQ9Y2I1 1504 aa39.04■■■■□ 3.84
RANBP3-201ENST00000034275 CCDC180Q9P1Z9 1646 aa34.25■■■■□ 3.07
RANBP3-201ENST00000034275 ABCC9O60706 1549 aa32.81■■■□□ 2.84
RANBP3-201ENST00000034275 ZCCHC6Q5VYS8 1495 aaKnown RBP32.66■■■□□ 2.82
RANBP3-201ENST00000034275 DCAF8L2P0C7V8 631 aa32.5■■■□□ 2.79
RANBP3-201ENST00000034275 DCAF1Q9Y4B6 1507 aa32.3■■■□□ 2.76
RANBP3-201ENST00000034275 MYO15BQ96JP2 1530 aa32.11■■■□□ 2.73
RANBP3-201ENST00000034275 NACADO15069 1562 aa32.06■■■□□ 2.72
RANBP3-201ENST00000034275 RB1CC1Q8TDY2 1594 aa31.89■■■□□ 2.7
RANBP3-201ENST00000034275 SHROOM4Q9ULL8 1493 aa31.48■■■□□ 2.63
RANBP3-201ENST00000034275 SCRIBQ14160 1630 aa31.39■■■□□ 2.62
RANBP3-201ENST00000034275 UNC13AQ9UPW8 1703 aa31.13■■■□□ 2.57
RANBP3-201ENST00000034275 PABPN1Q86U42 306 aaKnown RBP eCLIP30.89■■■□□ 2.548e-7■■□□□ 12.1
RANBP3-201ENST00000034275 BICRAQ9NZM4 1560 aa30.86■■■□□ 2.53
RANBP3-201ENST00000034275 CECR2Q9BXF3 1484 aa30.34■■■□□ 2.45
RANBP3-201ENST00000034275 BAZ1AQ9NRL2 1556 aaPredicted RBP30.2■■■□□ 2.42
RANBP3-201ENST00000034275 SUPT5HO00267 1087 aaKnown RBP30.13■■■□□ 2.41
RANBP3-201ENST00000034275 MROH2BQ7Z745 1585 aa30.11■■■□□ 2.41
RANBP3-201ENST00000034275 RSF1Q96T23 1441 aaPredicted RBP30.1■■■□□ 2.41
RANBP3-201ENST00000034275 SMARCA4P51532 1647 aa30.08■■■□□ 2.41
RANBP3-201ENST00000034275 EIF4G1Q04637 1599 aaKnown RBP30■■■□□ 2.39
RANBP3-201ENST00000034275 WIZO95785 1651 aa29.83■■■□□ 2.37
RANBP3-201ENST00000034275 PEG3Q9GZU2 1588 aa29.75■■■□□ 2.35
RANBP3-201ENST00000034275 ATAD2BQ9ULI0 1458 aa29.74■■■□□ 2.35
RANBP3-201ENST00000034275 SMARCA2P51531 1590 aa29.73■■■□□ 2.35
RANBP3-201ENST00000034275 CC2D2AQ9P2K1 1620 aa29.68■■■□□ 2.34
RANBP3-201ENST00000034275 NCAPD3P42695 1498 aa29.6■■■□□ 2.33
RANBP3-201ENST00000034275 BAZ1BQ9UIG0 1483 aaKnown RBP29.56■■■□□ 2.32
RANBP3-201ENST00000034275 TOP2AP11388 1531 aaKnown RBP29.53■■■□□ 2.32
RANBP3-201ENST00000034275 HMGXB3Q12766 1538 aa29.48■■■□□ 2.31
RANBP3-201ENST00000034275 DNAJC5BQ9UF47 199 aa29.38■■■□□ 2.29
RANBP3-201ENST00000034275 CCDC88BA6NC98 1476 aa29.24■■■□□ 2.27
RANBP3-201ENST00000034275 CADPSQ9ULU8 1353 aa28.82■■■□□ 2.2
RANBP3-201ENST00000034275 CFTRP13569 1480 aa28.79■■■□□ 2.2
RANBP3-201ENST00000034275 LAMC3Q9Y6N6 1575 aa28.66■■■□□ 2.18
RANBP3-201ENST00000034275 NESP48681 1621 aa28.63■■■□□ 2.17
RANBP3-201ENST00000034275 CHIC1Q5VXU3 224 aa28.57■■■□□ 2.16
RANBP3-201ENST00000034275 PRDM2Q13029 1718 aa28.56■■■□□ 2.16
RANBP3-201ENST00000034275 PDS5BQ9NTI5 1447 aa28.49■■■□□ 2.15
RANBP3-201ENST00000034275 FANCD2Q9BXW9 1451 aa28.46■■■□□ 2.15
RANBP3-201ENST00000034275 ABCC8Q09428 1581 aa28.42■■■□□ 2.14
RANBP3-201ENST00000034275 TRIM41Q8WV44 630 aa28.41■■■□□ 2.14
RANBP3-201ENST00000034275 WRNQ14191 1432 aaPredicted RBP eCLIP28.37■■■□□ 2.135e-6■■■■■ 29.2
RANBP3-201ENST00000034275 CEP164Q9UPV0 1460 aa28.34■■■□□ 2.13
RANBP3-201ENST00000034275 KIF21AQ7Z4S6 1674 aa28.27■■■□□ 2.12
RANBP3-201ENST00000034275 ERCC6Q03468 1493 aa28.23■■■□□ 2.11
RANBP3-201ENST00000034275 SYNJ1O43426 1573 aa28.2■■■□□ 2.1
RANBP3-201ENST00000034275 CUX1P39880 1505 aa28.18■■■□□ 2.1
RANBP3-201ENST00000034275 TOP2BQ02880 1626 aa28.16■■■□□ 2.1
RANBP3-201ENST00000034275 BIVM-ERCC5R4GMW8 1640 aa28.12■■■□□ 2.09
RANBP3-201ENST00000034275 DNMBPQ6XZF7 1577 aa28.1■■■□□ 2.09
RANBP3-201ENST00000034275 MRC2Q9UBG0 1479 aa28.1■■■□□ 2.09
RANBP3-201ENST00000034275 URB2Q14146 1524 aaKnown RBP28.09■■■□□ 2.09
RANBP3-201ENST00000034275 TOPBP1Q92547 1522 aa28.08■■■□□ 2.09
RANBP3-201ENST00000034275 FGD5Q6ZNL6 1462 aa27.97■■■□□ 2.07
RANBP3-201ENST00000034275 WDR62O43379 1518 aa27.94■■■□□ 2.06
RANBP3-201ENST00000034275 THOC2Q8NI27 1593 aaKnown RBP27.92■■■□□ 2.06
RANBP3-201ENST00000034275 POLA1P09884 1462 aaPredicted RBP27.91■■■□□ 2.06
RANBP3-201ENST00000034275 SOGA1O94964 1423 aa27.87■■■□□ 2.05
RANBP3-201ENST00000034275 FAM9AQ8IZU1 332 aaPredicted RBP27.82■■■□□ 2.04
RANBP3-201ENST00000034275 RAD54L2Q9Y4B4 1467 aa27.8■■■□□ 2.04
RANBP3-201ENST00000034275 EEA1Q15075 1411 aa27.75■■■□□ 2.03
RANBP3-201ENST00000034275 CUX2O14529 1486 aa27.74■■■□□ 2.03
RANBP3-201ENST00000034275 RUSC2Q8N2Y8 1516 aa27.73■■■□□ 2.03
RANBP3-201ENST00000034275 ABCA10Q8WWZ4 1543 aa27.73■■■□□ 2.03
RANBP3-201ENST00000034275 KIF27Q86VH2 1401 aa27.73■■■□□ 2.03
RANBP3-201ENST00000034275 IFT140Q96RY7 1462 aa27.7■■■□□ 2.02
RANBP3-201ENST00000034275 TARBP1Q13395 1621 aaKnown RBP27.68■■■□□ 2.02
RANBP3-201ENST00000034275 CSRNP3Q8WYN3 585 aa27.67■■■□□ 2.02
RANBP3-201ENST00000034275 TDRD9Q8NDG6 1382 aaKnown RBP27.62■■■□□ 2.01
RANBP3-201ENST00000034275 WDR97A6NE52 1622 aa27.61■■■□□ 2.01
RANBP3-201ENST00000034275 GAPVD1Q14C86 1478 aa27.53■■■□□ 2
RANBP3-201ENST00000034275 IGF1RP08069 1367 aa27.52■■■□□ 2
RANBP3-201ENST00000034275 AQRO60306 1485 aaKnown RBP eCLIP27.51■■□□□ 1.995e-8■■■■■ 30.4
RANBP3-201ENST00000034275 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■□□□ 1.99
RANBP3-201ENST00000034275 ABCA5Q8WWZ7 1642 aa27.5■■□□□ 1.99
RANBP3-201ENST00000034275 LOC105371045A0A1W2PR82 267 aa27.46■■□□□ 1.99
RANBP3-201ENST00000034275 EHMT2Q96KQ7 1210 aa27.41■■□□□ 1.98
RANBP3-201ENST00000034275 ERICH3Q5RHP9 1530 aa27.41■■□□□ 1.98
RANBP3-201ENST00000034275 GRIN2BQ13224 1484 aa27.39■■□□□ 1.98
RANBP3-201ENST00000034275 EIF4G3O43432 1585 aaKnown RBP27.39■■□□□ 1.98
RANBP3-201ENST00000034275 CARMIL1Q5VZK9 1371 aa27.38■■□□□ 1.97
RANBP3-201ENST00000034275 PRXQ9BXM0 1461 aa27.37■■□□□ 1.97
RANBP3-201ENST00000034275 PBRM1Q86U86 1689 aa27.34■■□□□ 1.97
RANBP3-201ENST00000034275 KIF21BO75037 1637 aa27.33■■□□□ 1.97
RANBP3-201ENST00000034275 CUL7Q14999 1698 aa27.31■■□□□ 1.96
RANBP3-201ENST00000034275 GOLGA3Q08378 1498 aa27.3■■□□□ 1.96
RANBP3-201ENST00000034275 UBTFP17480 764 aaKnown RBP27.29■■□□□ 1.96
RANBP3-201ENST00000034275 RAPGEF2Q9Y4G8 1499 aa27.28■■□□□ 1.96
RANBP3-201ENST00000034275 FHAD1B1AJZ9 1412 aa27.24■■□□□ 1.95
RANBP3-201ENST00000034275 SNAPC4Q5SXM2 1469 aa27.22■■□□□ 1.95
RANBP3-201ENST00000034275 MAGI1Q96QZ7 1491 aaPredicted RBP27.21■■□□□ 1.95
RANBP3-201ENST00000034275 ADAMTS12P58397 1594 aa27.17■■□□□ 1.94
RANBP3-201ENST00000034275 CHMP7Q8WUX9 453 aaPredicted RBP27.14■■□□□ 1.94
RANBP3-201ENST00000034275 TNIKQ9UKE5 1360 aa27.14■■□□□ 1.94
RANBP3-201ENST00000034275 FBLN2P98095 1184 aa27.12■■□□□ 1.93
RANBP3-201ENST00000034275 SYNJ2O15056 1496 aa27.12■■□□□ 1.93
RANBP3-201ENST00000034275 GRIN2AQ12879 1464 aa27.03■■□□□ 1.92
RANBP3-201ENST00000034275 RANGAP1P46060 587 aaPredicted RBP26.94■■□□□ 1.9
RANBP3-201ENST00000034275 CEP162Q5TB80 1403 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms