RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 NISCHQ9Y2I1 1504 aa41.19■■■■■ 4.18
CDKN1A-207ENST00000478800 CCDC180Q9P1Z9 1646 aa36.63■■■■□ 3.45
CDKN1A-207ENST00000478800 ABCC9O60706 1549 aa36.12■■■■□ 3.37
CDKN1A-207ENST00000478800 DCAF8L2P0C7V8 631 aa34.69■■■■□ 3.14
CDKN1A-207ENST00000478800 RB1CC1Q8TDY2 1594 aa34.65■■■■□ 3.14
CDKN1A-207ENST00000478800 NACADO15069 1562 aa34.55■■■■□ 3.12
CDKN1A-207ENST00000478800 MYO15BQ96JP2 1530 aa34.26■■■■□ 3.08
CDKN1A-207ENST00000478800 ZCCHC6Q5VYS8 1495 aaKnown RBP34.26■■■■□ 3.07
CDKN1A-207ENST00000478800 DCAF1Q9Y4B6 1507 aa34.05■■■■□ 3.04
CDKN1A-207ENST00000478800 PABPN1Q86U42 306 aaKnown RBP eCLIP33.78■■■■□ 3
CDKN1A-207ENST00000478800 DNAJC5BQ9UF47 199 aa33.69■■■□□ 2.98
CDKN1A-207ENST00000478800 UNC13AQ9UPW8 1703 aa33.67■■■□□ 2.98
CDKN1A-207ENST00000478800 BICRAQ9NZM4 1560 aa33.5■■■□□ 2.95
CDKN1A-207ENST00000478800 SCRIBQ14160 1630 aa33.48■■■□□ 2.95
CDKN1A-207ENST00000478800 SHROOM4Q9ULL8 1493 aa33.22■■■□□ 2.91
CDKN1A-207ENST00000478800 EIF4G1Q04637 1599 aaKnown RBP32.7■■■□□ 2.82
CDKN1A-207ENST00000478800 CC2D2AQ9P2K1 1620 aa32.6■■■□□ 2.81
CDKN1A-207ENST00000478800 CECR2Q9BXF3 1484 aa32.48■■■□□ 2.79
CDKN1A-207ENST00000478800 BAZ1AQ9NRL2 1556 aaPredicted RBP31.97■■■□□ 2.71
CDKN1A-207ENST00000478800 SMARCA4P51532 1647 aa31.97■■■□□ 2.71
CDKN1A-207ENST00000478800 NCAPD3P42695 1498 aa31.89■■■□□ 2.7
CDKN1A-207ENST00000478800 ATAD2BQ9ULI0 1458 aa31.88■■■□□ 2.69
CDKN1A-207ENST00000478800 SMARCA2P51531 1590 aa31.85■■■□□ 2.69
CDKN1A-207ENST00000478800 MROH2BQ7Z745 1585 aa31.73■■■□□ 2.67
CDKN1A-207ENST00000478800 HMGXB3Q12766 1538 aa31.69■■■□□ 2.66
CDKN1A-207ENST00000478800 BAZ1BQ9UIG0 1483 aaKnown RBP31.65■■■□□ 2.66
CDKN1A-207ENST00000478800 PEG3Q9GZU2 1588 aa31.64■■■□□ 2.65
CDKN1A-207ENST00000478800 WIZO95785 1651 aa31.36■■■□□ 2.61
CDKN1A-207ENST00000478800 RSF1Q96T23 1441 aaPredicted RBP31.34■■■□□ 2.61
CDKN1A-207ENST00000478800 ERCC6Q03468 1493 aa31.21■■■□□ 2.59
CDKN1A-207ENST00000478800 NESP48681 1621 aa31.16■■■□□ 2.58
CDKN1A-207ENST00000478800 LAMC3Q9Y6N6 1575 aa31.06■■■□□ 2.56
CDKN1A-207ENST00000478800 TOP2AP11388 1531 aaKnown RBP31.05■■■□□ 2.56
CDKN1A-207ENST00000478800 DNAJC5Q9H3Z4 198 aa31■■■□□ 2.55
CDKN1A-207ENST00000478800 CADPSQ9ULU8 1353 aa31■■■□□ 2.55
CDKN1A-207ENST00000478800 PDS5BQ9NTI5 1447 aa30.95■■■□□ 2.54
CDKN1A-207ENST00000478800 CUX2O14529 1486 aa30.92■■■□□ 2.54
CDKN1A-207ENST00000478800 CFTRP13569 1480 aa30.73■■■□□ 2.51
CDKN1A-207ENST00000478800 KIF21AQ7Z4S6 1674 aa30.71■■■□□ 2.51
CDKN1A-207ENST00000478800 CCDC88BA6NC98 1476 aa30.71■■■□□ 2.51
CDKN1A-207ENST00000478800 THOC2Q8NI27 1593 aaKnown RBP30.66■■■□□ 2.5
CDKN1A-207ENST00000478800 FANCD2Q9BXW9 1451 aa30.63■■■□□ 2.49
CDKN1A-207ENST00000478800 CEP164Q9UPV0 1460 aa30.62■■■□□ 2.49
CDKN1A-207ENST00000478800 MRC2Q9UBG0 1479 aa30.59■■■□□ 2.49
CDKN1A-207ENST00000478800 SUPT5HO00267 1087 aaKnown RBP30.57■■■□□ 2.48
CDKN1A-207ENST00000478800 WDR62O43379 1518 aa30.44■■■□□ 2.46
CDKN1A-207ENST00000478800 PRDM2Q13029 1718 aa30.36■■■□□ 2.45
CDKN1A-207ENST00000478800 URB2Q14146 1524 aaKnown RBP30.28■■■□□ 2.44
CDKN1A-207ENST00000478800 ABCC8Q09428 1581 aa30.13■■■□□ 2.41
CDKN1A-207ENST00000478800 TOPBP1Q92547 1522 aa30.09■■■□□ 2.41
CDKN1A-207ENST00000478800 DNMBPQ6XZF7 1577 aa30.03■■■□□ 2.4
CDKN1A-207ENST00000478800 IFT140Q96RY7 1462 aa29.99■■■□□ 2.39
CDKN1A-207ENST00000478800 POLA1P09884 1462 aaPredicted RBP29.82■■■□□ 2.36
CDKN1A-207ENST00000478800 ZNF608Q9ULD9 1512 aaPredicted RBP29.81■■■□□ 2.36
CDKN1A-207ENST00000478800 CUX1P39880 1505 aa29.78■■■□□ 2.36
CDKN1A-207ENST00000478800 SOGA1O94964 1423 aa29.77■■■□□ 2.36
CDKN1A-207ENST00000478800 FGD5Q6ZNL6 1462 aa29.74■■■□□ 2.35
CDKN1A-207ENST00000478800 TARBP1Q13395 1621 aaKnown RBP29.71■■■□□ 2.35
CDKN1A-207ENST00000478800 RAD54L2Q9Y4B4 1467 aa29.71■■■□□ 2.35
CDKN1A-207ENST00000478800 EIF4G3O43432 1585 aaKnown RBP29.67■■■□□ 2.34
CDKN1A-207ENST00000478800 AQRO60306 1485 aaKnown RBP eCLIP29.67■■■□□ 2.345e-7■■■■■ 38
CDKN1A-207ENST00000478800 OSCARQ8IYS5 282 aa29.65■■■□□ 2.34
CDKN1A-207ENST00000478800 TRIM41Q8WV44 630 aa29.63■■■□□ 2.33
CDKN1A-207ENST00000478800 TDRD9Q8NDG6 1382 aaKnown RBP29.62■■■□□ 2.33
CDKN1A-207ENST00000478800 WRNQ14191 1432 aaPredicted RBP eCLIP29.61■■■□□ 2.33
CDKN1A-207ENST00000478800 WDR97A6NE52 1622 aa29.51■■■□□ 2.31
CDKN1A-207ENST00000478800 FBLN2P98095 1184 aa29.48■■■□□ 2.31
CDKN1A-207ENST00000478800 TOP2BQ02880 1626 aa29.48■■■□□ 2.31
CDKN1A-207ENST00000478800 SYNJ1O43426 1573 aa29.44■■■□□ 2.3
CDKN1A-207ENST00000478800 BIVM-ERCC5R4GMW8 1640 aa29.44■■■□□ 2.3
CDKN1A-207ENST00000478800 ABCA10Q8WWZ4 1543 aa29.44■■■□□ 2.3
CDKN1A-207ENST00000478800 GRIN2BQ13224 1484 aa29.42■■■□□ 2.3
CDKN1A-207ENST00000478800 GAPVD1Q14C86 1478 aa29.39■■■□□ 2.3
CDKN1A-207ENST00000478800 SNAPC4Q5SXM2 1469 aa29.38■■■□□ 2.29
CDKN1A-207ENST00000478800 CHMP7Q8WUX9 453 aaPredicted RBP29.34■■■□□ 2.29
CDKN1A-207ENST00000478800 MAGI1Q96QZ7 1491 aaPredicted RBP29.34■■■□□ 2.29
CDKN1A-207ENST00000478800 CHD1O14646 1710 aa29.28■■■□□ 2.28
CDKN1A-207ENST00000478800 ABCA5Q8WWZ7 1642 aa29.27■■■□□ 2.28
CDKN1A-207ENST00000478800 SYNJ2O15056 1496 aa29.23■■■□□ 2.27
CDKN1A-207ENST00000478800 PBRM1Q86U86 1689 aa29.23■■■□□ 2.27
CDKN1A-207ENST00000478800 RIMBP3CA6NJZ7 1639 aa29.18■■■□□ 2.26
CDKN1A-207ENST00000478800 RIMBP3BA6NNM3 1639 aa29.18■■■□□ 2.26
CDKN1A-207ENST00000478800 RIMBP3Q9UFD9 1639 aa29.18■■■□□ 2.26
CDKN1A-207ENST00000478800 ERICH3Q5RHP9 1530 aa29.08■■■□□ 2.25
CDKN1A-207ENST00000478800 ARHGEF11O15085 1522 aa29.06■■■□□ 2.24
CDKN1A-207ENST00000478800 FHAD1B1AJZ9 1412 aa29.06■■■□□ 2.24
CDKN1A-207ENST00000478800 ADAMTS12P58397 1594 aa29.04■■■□□ 2.24
CDKN1A-207ENST00000478800 KIF27Q86VH2 1401 aa29.03■■■□□ 2.24
CDKN1A-207ENST00000478800 GRIN2AQ12879 1464 aa29.01■■■□□ 2.23
CDKN1A-207ENST00000478800 CLASP1Q7Z460 1538 aa28.99■■■□□ 2.23
CDKN1A-207ENST00000478800 CYB5RLQ6IPT4 315 aa28.92■■■□□ 2.22
CDKN1A-207ENST00000478800 IGF1RP08069 1367 aa28.88■■■□□ 2.21
CDKN1A-207ENST00000478800 NUP160Q12769 1436 aa28.86■■■□□ 2.21
CDKN1A-207ENST00000478800 CEP170Q5SW79 1584 aa28.83■■■□□ 2.21
CDKN1A-207ENST00000478800 ARAP1Q96P48 1450 aa28.81■■■□□ 2.2
CDKN1A-207ENST00000478800 CUL7Q14999 1698 aa28.77■■■□□ 2.2
CDKN1A-207ENST00000478800 CARMIL1Q5VZK9 1371 aa28.74■■■□□ 2.19
CDKN1A-207ENST00000478800 JPH4Q96JJ6 628 aa28.67■■■□□ 2.18
CDKN1A-207ENST00000478800 RUSC2Q8N2Y8 1516 aa28.62■■■□□ 2.17
CDKN1A-207ENST00000478800 SHROOM2Q13796 1616 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms