RNA–Protein interactions for RNA: ENST00000357171.7

SHANK2-202, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 1,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-202ENST00000357171 NISCHQ9Y2I1 1504 aa33.36■■■□□ 2.93
SHANK2-202ENST00000357171 CCDC180Q9P1Z9 1646 aa29.74■■■□□ 2.35
SHANK2-202ENST00000357171 ABCC9O60706 1549 aa29.04■■■□□ 2.24
SHANK2-202ENST00000357171 RB1CC1Q8TDY2 1594 aa27.97■■■□□ 2.07
SHANK2-202ENST00000357171 NACADO15069 1562 aa27.95■■■□□ 2.06
SHANK2-202ENST00000357171 MYO15BQ96JP2 1530 aa27.82■■■□□ 2.04
SHANK2-202ENST00000357171 ZCCHC6Q5VYS8 1495 aaKnown RBP27.77■■■□□ 2.04
SHANK2-202ENST00000357171 DCAF8L2P0C7V8 631 aa27.69■■■□□ 2.02
SHANK2-202ENST00000357171 DCAF1Q9Y4B6 1507 aa27.66■■■□□ 2.02
SHANK2-202ENST00000357171 UNC13AQ9UPW8 1703 aa27.43■■□□□ 1.98
SHANK2-202ENST00000357171 BICRAQ9NZM4 1560 aa27.18■■□□□ 1.94
SHANK2-202ENST00000357171 PABPN1Q86U42 306 aaKnown RBP eCLIP27.09■■□□□ 1.93
SHANK2-202ENST00000357171 SCRIBQ14160 1630 aa27.02■■□□□ 1.92
SHANK2-202ENST00000357171 SHROOM4Q9ULL8 1493 aa26.9■■□□□ 1.9
SHANK2-202ENST00000357171 DNAJC5BQ9UF47 199 aa26.78■■□□□ 1.88
SHANK2-202ENST00000357171 EIF4G1Q04637 1599 aaKnown RBP26.43■■□□□ 1.82
SHANK2-202ENST00000357171 CC2D2AQ9P2K1 1620 aa26.34■■□□□ 1.81
SHANK2-202ENST00000357171 CECR2Q9BXF3 1484 aa26.13■■□□□ 1.77
SHANK2-202ENST00000357171 SMARCA4P51532 1647 aa25.9■■□□□ 1.74
SHANK2-202ENST00000357171 BAZ1AQ9NRL2 1556 aaPredicted RBP25.84■■□□□ 1.73
SHANK2-202ENST00000357171 NCAPD3P42695 1498 aa25.79■■□□□ 1.72
SHANK2-202ENST00000357171 ATAD2BQ9ULI0 1458 aa25.77■■□□□ 1.72
SHANK2-202ENST00000357171 SMARCA2P51531 1590 aa25.73■■□□□ 1.71
SHANK2-202ENST00000357171 PEG3Q9GZU2 1588 aa25.72■■□□□ 1.71
SHANK2-202ENST00000357171 MROH2BQ7Z745 1585 aa25.68■■□□□ 1.7
SHANK2-202ENST00000357171 HMGXB3Q12766 1538 aa25.66■■□□□ 1.7
SHANK2-202ENST00000357171 BAZ1BQ9UIG0 1483 aaKnown RBP25.51■■□□□ 1.67
SHANK2-202ENST00000357171 WIZO95785 1651 aa25.41■■□□□ 1.66
SHANK2-202ENST00000357171 RSF1Q96T23 1441 aaPredicted RBP25.36■■□□□ 1.65
SHANK2-202ENST00000357171 NESP48681 1621 aa25.14■■□□□ 1.61
SHANK2-202ENST00000357171 TOP2AP11388 1531 aaKnown RBP25.13■■□□□ 1.61
SHANK2-202ENST00000357171 LAMC3Q9Y6N6 1575 aa25.12■■□□□ 1.61
SHANK2-202ENST00000357171 ERCC6Q03468 1493 aa25■■□□□ 1.59
SHANK2-202ENST00000357171 CADPSQ9ULU8 1353 aa25■■□□□ 1.59
SHANK2-202ENST00000357171 PDS5BQ9NTI5 1447 aa24.9■■□□□ 1.58
SHANK2-202ENST00000357171 KIF21AQ7Z4S6 1674 aa24.89■■□□□ 1.57
SHANK2-202ENST00000357171 CUX2O14529 1486 aa24.86■■□□□ 1.57
SHANK2-202ENST00000357171 CFTRP13569 1480 aa24.86■■□□□ 1.57
SHANK2-202ENST00000357171 THOC2Q8NI27 1593 aaKnown RBP24.84■■□□□ 1.57
SHANK2-202ENST00000357171 CCDC88BA6NC98 1476 aa24.82■■□□□ 1.56
SHANK2-202ENST00000357171 PRDM2Q13029 1718 aa24.74■■□□□ 1.55
SHANK2-202ENST00000357171 FANCD2Q9BXW9 1451 aa24.69■■□□□ 1.54
SHANK2-202ENST00000357171 MRC2Q9UBG0 1479 aa24.66■■□□□ 1.54
SHANK2-202ENST00000357171 CEP164Q9UPV0 1460 aa24.66■■□□□ 1.54
SHANK2-202ENST00000357171 WDR62O43379 1518 aa24.63■■□□□ 1.53
SHANK2-202ENST00000357171 SUPT5HO00267 1087 aaKnown RBP24.5■■□□□ 1.51
SHANK2-202ENST00000357171 URB2Q14146 1524 aaKnown RBP24.48■■□□□ 1.51
SHANK2-202ENST00000357171 ABCC8Q09428 1581 aa24.31■■□□□ 1.48
SHANK2-202ENST00000357171 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
SHANK2-202ENST00000357171 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
SHANK2-202ENST00000357171 DNAJC5Q9H3Z4 198 aa24.18■■□□□ 1.46
SHANK2-202ENST00000357171 IFT140Q96RY7 1462 aa24.17■■□□□ 1.46
SHANK2-202ENST00000357171 CUX1P39880 1505 aa24.1■■□□□ 1.45
SHANK2-202ENST00000357171 TARBP1Q13395 1621 aaKnown RBP24.1■■□□□ 1.45
SHANK2-202ENST00000357171 POLA1P09884 1462 aaPredicted RBP24.09■■□□□ 1.45
SHANK2-202ENST00000357171 ZNF608Q9ULD9 1512 aaPredicted RBP24.06■■□□□ 1.44
SHANK2-202ENST00000357171 FGD5Q6ZNL6 1462 aa24.01■■□□□ 1.43
SHANK2-202ENST00000357171 EIF4G3O43432 1585 aaKnown RBP23.98■■□□□ 1.43
SHANK2-202ENST00000357171 SOGA1O94964 1423 aa23.96■■□□□ 1.43
SHANK2-202ENST00000357171 RAD54L2Q9Y4B4 1467 aa23.96■■□□□ 1.43
SHANK2-202ENST00000357171 WDR97A6NE52 1622 aa23.91■■□□□ 1.42
SHANK2-202ENST00000357171 BIVM-ERCC5R4GMW8 1640 aa23.91■■□□□ 1.42
SHANK2-202ENST00000357171 TOP2BQ02880 1626 aa23.9■■□□□ 1.42
SHANK2-202ENST00000357171 AQRO60306 1485 aaKnown RBP eCLIP23.89■■□□□ 1.425e-7■■■■■ 27.6
SHANK2-202ENST00000357171 WRNQ14191 1432 aaPredicted RBP eCLIP23.88■■□□□ 1.41
SHANK2-202ENST00000357171 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
SHANK2-202ENST00000357171 TDRD9Q8NDG6 1382 aaKnown RBP23.82■■□□□ 1.4
SHANK2-202ENST00000357171 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
SHANK2-202ENST00000357171 OSCARQ8IYS5 282 aa23.76■■□□□ 1.39
SHANK2-202ENST00000357171 ABCA5Q8WWZ7 1642 aa23.74■■□□□ 1.39
SHANK2-202ENST00000357171 CHD1O14646 1710 aa23.71■■□□□ 1.39
SHANK2-202ENST00000357171 GRIN2BQ13224 1484 aa23.7■■□□□ 1.38
SHANK2-202ENST00000357171 PBRM1Q86U86 1689 aa23.69■■□□□ 1.38
SHANK2-202ENST00000357171 GAPVD1Q14C86 1478 aa23.69■■□□□ 1.38
SHANK2-202ENST00000357171 MAGI1Q96QZ7 1491 aaPredicted RBP23.68■■□□□ 1.38
SHANK2-202ENST00000357171 SNAPC4Q5SXM2 1469 aa23.67■■□□□ 1.38
SHANK2-202ENST00000357171 SYNJ2O15056 1496 aa23.58■■□□□ 1.37
SHANK2-202ENST00000357171 ERICH3Q5RHP9 1530 aa23.53■■□□□ 1.36
SHANK2-202ENST00000357171 FBLN2P98095 1184 aa23.52■■□□□ 1.36
SHANK2-202ENST00000357171 ADAMTS12P58397 1594 aa23.5■■□□□ 1.35
SHANK2-202ENST00000357171 CHMP7Q8WUX9 453 aaPredicted RBP23.49■■□□□ 1.35
SHANK2-202ENST00000357171 CLASP1Q7Z460 1538 aa23.47■■□□□ 1.35
SHANK2-202ENST00000357171 RIMBP3CA6NJZ7 1639 aa23.44■■□□□ 1.34
SHANK2-202ENST00000357171 RIMBP3BA6NNM3 1639 aa23.44■■□□□ 1.34
SHANK2-202ENST00000357171 RIMBP3Q9UFD9 1639 aa23.44■■□□□ 1.34
SHANK2-202ENST00000357171 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
SHANK2-202ENST00000357171 ARHGEF11O15085 1522 aa23.42■■□□□ 1.34
SHANK2-202ENST00000357171 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
SHANK2-202ENST00000357171 KIF27Q86VH2 1401 aa23.38■■□□□ 1.33
SHANK2-202ENST00000357171 NUP160Q12769 1436 aa23.34■■□□□ 1.33
SHANK2-202ENST00000357171 IGF1RP08069 1367 aa23.34■■□□□ 1.33
SHANK2-202ENST00000357171 CEP170Q5SW79 1584 aa23.32■■□□□ 1.32
SHANK2-202ENST00000357171 CUL7Q14999 1698 aa23.3■■□□□ 1.32
SHANK2-202ENST00000357171 ARAP1Q96P48 1450 aa23.23■■□□□ 1.31
SHANK2-202ENST00000357171 SHROOM2Q13796 1616 aa23.22■■□□□ 1.31
SHANK2-202ENST00000357171 TRIM41Q8WV44 630 aa23.21■■□□□ 1.31
SHANK2-202ENST00000357171 RUSC2Q8N2Y8 1516 aa23.16■■□□□ 1.3
SHANK2-202ENST00000357171 CARMIL1Q5VZK9 1371 aa23.15■■□□□ 1.3
SHANK2-202ENST00000357171 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
SHANK2-202ENST00000357171 ERCC6L2Q5T890 1561 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms