RNA–Protein interactions for RNA: ENST00000459970.1

CDKN1A-205, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 5

Gene CDKN1A, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-205ENST00000459970 NISCHQ9Y2I1 1504 aa44.85■■■■■ 4.77
CDKN1A-205ENST00000459970 CCDC180Q9P1Z9 1646 aa40.2■■■■■ 4.03
CDKN1A-205ENST00000459970 ABCC9O60706 1549 aa39.65■■■■□ 3.94
CDKN1A-205ENST00000459970 RB1CC1Q8TDY2 1594 aa38.03■■■■□ 3.68
CDKN1A-205ENST00000459970 NACADO15069 1562 aa37.89■■■■□ 3.66
CDKN1A-205ENST00000459970 MYO15BQ96JP2 1530 aa37.58■■■■□ 3.61
CDKN1A-205ENST00000459970 DCAF8L2P0C7V8 631 aa37.43■■■■□ 3.58
CDKN1A-205ENST00000459970 ZCCHC6Q5VYS8 1495 aaKnown RBP37.28■■■■□ 3.56
CDKN1A-205ENST00000459970 DCAF1Q9Y4B6 1507 aa37.19■■■■□ 3.54
CDKN1A-205ENST00000459970 UNC13AQ9UPW8 1703 aa37.12■■■■□ 3.53
CDKN1A-205ENST00000459970 BICRAQ9NZM4 1560 aa36.88■■■■□ 3.49
CDKN1A-205ENST00000459970 PABPN1Q86U42 306 aaKnown RBP eCLIP36.88■■■■□ 3.49
CDKN1A-205ENST00000459970 DNAJC5BQ9UF47 199 aa36.82■■■■□ 3.48
CDKN1A-205ENST00000459970 SHROOM4Q9ULL8 1493 aa36.61■■■■□ 3.45
CDKN1A-205ENST00000459970 SCRIBQ14160 1630 aa36.48■■■■□ 3.43
CDKN1A-205ENST00000459970 EIF4G1Q04637 1599 aaKnown RBP35.95■■■■□ 3.35
CDKN1A-205ENST00000459970 CC2D2AQ9P2K1 1620 aa35.9■■■■□ 3.34
CDKN1A-205ENST00000459970 CECR2Q9BXF3 1484 aa35.74■■■■□ 3.31
CDKN1A-205ENST00000459970 NCAPD3P42695 1498 aa34.96■■■■□ 3.19
CDKN1A-205ENST00000459970 SMARCA4P51532 1647 aa34.92■■■■□ 3.18
CDKN1A-205ENST00000459970 ATAD2BQ9ULI0 1458 aa34.85■■■■□ 3.17
CDKN1A-205ENST00000459970 SMARCA2P51531 1590 aa34.83■■■■□ 3.17
CDKN1A-205ENST00000459970 BAZ1AQ9NRL2 1556 aaPredicted RBP34.83■■■■□ 3.17
CDKN1A-205ENST00000459970 HMGXB3Q12766 1538 aa34.77■■■■□ 3.16
CDKN1A-205ENST00000459970 PEG3Q9GZU2 1588 aa34.66■■■■□ 3.14
CDKN1A-205ENST00000459970 BAZ1BQ9UIG0 1483 aaKnown RBP34.52■■■■□ 3.12
CDKN1A-205ENST00000459970 MROH2BQ7Z745 1585 aa34.5■■■■□ 3.11
CDKN1A-205ENST00000459970 ERCC6Q03468 1493 aa34.25■■■■□ 3.07
CDKN1A-205ENST00000459970 CUX2O14529 1486 aa34.19■■■■□ 3.06
CDKN1A-205ENST00000459970 NESP48681 1621 aa34.15■■■■□ 3.06
CDKN1A-205ENST00000459970 LAMC3Q9Y6N6 1575 aa34.12■■■■□ 3.05
CDKN1A-205ENST00000459970 WIZO95785 1651 aa34.09■■■■□ 3.05
CDKN1A-205ENST00000459970 RSF1Q96T23 1441 aaPredicted RBP33.93■■■■□ 3.02
CDKN1A-205ENST00000459970 PDS5BQ9NTI5 1447 aa33.87■■■■□ 3.01
CDKN1A-205ENST00000459970 THOC2Q8NI27 1593 aaKnown RBP33.86■■■■□ 3.01
CDKN1A-205ENST00000459970 CADPSQ9ULU8 1353 aa33.85■■■■□ 3.01
CDKN1A-205ENST00000459970 KIF21AQ7Z4S6 1674 aa33.79■■■■□ 3
CDKN1A-205ENST00000459970 TOP2AP11388 1531 aaKnown RBP33.78■■■■□ 3
CDKN1A-205ENST00000459970 DNAJC5Q9H3Z4 198 aa33.66■■■□□ 2.98
CDKN1A-205ENST00000459970 CFTRP13569 1480 aa33.58■■■□□ 2.97
CDKN1A-205ENST00000459970 MRC2Q9UBG0 1479 aa33.56■■■□□ 2.96
CDKN1A-205ENST00000459970 WDR62O43379 1518 aa33.5■■■□□ 2.95
CDKN1A-205ENST00000459970 CEP164Q9UPV0 1460 aa33.49■■■□□ 2.95
CDKN1A-205ENST00000459970 FANCD2Q9BXW9 1451 aa33.46■■■□□ 2.95
CDKN1A-205ENST00000459970 CCDC88BA6NC98 1476 aa33.31■■■□□ 2.92
CDKN1A-205ENST00000459970 PRDM2Q13029 1718 aa33.31■■■□□ 2.92
CDKN1A-205ENST00000459970 URB2Q14146 1524 aaKnown RBP33.16■■■□□ 2.9
CDKN1A-205ENST00000459970 ABCC8Q09428 1581 aa32.91■■■□□ 2.86
CDKN1A-205ENST00000459970 TOPBP1Q92547 1522 aa32.87■■■□□ 2.85
CDKN1A-205ENST00000459970 IFT140Q96RY7 1462 aa32.83■■■□□ 2.85
CDKN1A-205ENST00000459970 DNMBPQ6XZF7 1577 aa32.83■■■□□ 2.85
CDKN1A-205ENST00000459970 ZNF608Q9ULD9 1512 aaPredicted RBP32.65■■■□□ 2.82
CDKN1A-205ENST00000459970 TARBP1Q13395 1621 aaKnown RBP32.58■■■□□ 2.81
CDKN1A-205ENST00000459970 POLA1P09884 1462 aaPredicted RBP32.56■■■□□ 2.8
CDKN1A-205ENST00000459970 OSCARQ8IYS5 282 aa32.56■■■□□ 2.8
CDKN1A-205ENST00000459970 EIF4G3O43432 1585 aaKnown RBP32.56■■■□□ 2.8
CDKN1A-205ENST00000459970 SUPT5HO00267 1087 aaKnown RBP32.49■■■□□ 2.79
CDKN1A-205ENST00000459970 CUX1P39880 1505 aa32.41■■■□□ 2.78
CDKN1A-205ENST00000459970 WDR97A6NE52 1622 aa32.4■■■□□ 2.78
CDKN1A-205ENST00000459970 FGD5Q6ZNL6 1462 aa32.39■■■□□ 2.78
CDKN1A-205ENST00000459970 SOGA1O94964 1423 aa32.38■■■□□ 2.77
CDKN1A-205ENST00000459970 AQRO60306 1485 aaKnown RBP eCLIP32.37■■■□□ 2.775e-7■■■■■ 38
CDKN1A-205ENST00000459970 RAD54L2Q9Y4B4 1467 aa32.35■■■□□ 2.77
CDKN1A-205ENST00000459970 TDRD9Q8NDG6 1382 aaKnown RBP32.22■■■□□ 2.75
CDKN1A-205ENST00000459970 CHD1O14646 1710 aa32.22■■■□□ 2.75
CDKN1A-205ENST00000459970 TRIM41Q8WV44 630 aa32.18■■■□□ 2.74
CDKN1A-205ENST00000459970 RIMBP3CA6NJZ7 1639 aa32.13■■■□□ 2.73
CDKN1A-205ENST00000459970 RIMBP3BA6NNM3 1639 aa32.13■■■□□ 2.73
CDKN1A-205ENST00000459970 RIMBP3Q9UFD9 1639 aa32.13■■■□□ 2.73
CDKN1A-205ENST00000459970 MAGI1Q96QZ7 1491 aaPredicted RBP32.12■■■□□ 2.73
CDKN1A-205ENST00000459970 GRIN2BQ13224 1484 aa32.11■■■□□ 2.73
CDKN1A-205ENST00000459970 ABCA10Q8WWZ4 1543 aa32.1■■■□□ 2.73
CDKN1A-205ENST00000459970 SNAPC4Q5SXM2 1469 aa32.1■■■□□ 2.73
CDKN1A-205ENST00000459970 ARHGEF11O15085 1522 aa32.09■■■□□ 2.73
CDKN1A-205ENST00000459970 BIVM-ERCC5R4GMW8 1640 aa32.05■■■□□ 2.72
CDKN1A-205ENST00000459970 TOP2BQ02880 1626 aa32.04■■■□□ 2.72
CDKN1A-205ENST00000459970 ABCA5Q8WWZ7 1642 aa32.03■■■□□ 2.72
CDKN1A-205ENST00000459970 GAPVD1Q14C86 1478 aa32.02■■■□□ 2.72
CDKN1A-205ENST00000459970 WRNQ14191 1432 aaPredicted RBP eCLIP32.01■■■□□ 2.72
CDKN1A-205ENST00000459970 PBRM1Q86U86 1689 aa32■■■□□ 2.71
CDKN1A-205ENST00000459970 FBLN2P98095 1184 aa32■■■□□ 2.71
CDKN1A-205ENST00000459970 SYNJ2O15056 1496 aa31.98■■■□□ 2.71
CDKN1A-205ENST00000459970 SYNJ1O43426 1573 aa31.95■■■□□ 2.71
CDKN1A-205ENST00000459970 CLASP1Q7Z460 1538 aa31.92■■■□□ 2.7
CDKN1A-205ENST00000459970 CHMP7Q8WUX9 453 aaPredicted RBP31.91■■■□□ 2.7
CDKN1A-205ENST00000459970 ARAP1Q96P48 1450 aa31.78■■■□□ 2.68
CDKN1A-205ENST00000459970 ADAMTS12P58397 1594 aa31.75■■■□□ 2.67
CDKN1A-205ENST00000459970 ERICH3Q5RHP9 1530 aa31.72■■■□□ 2.67
CDKN1A-205ENST00000459970 GRIN2AQ12879 1464 aa31.7■■■□□ 2.66
CDKN1A-205ENST00000459970 CYB5RLQ6IPT4 315 aa31.69■■■□□ 2.66
CDKN1A-205ENST00000459970 FHAD1B1AJZ9 1412 aa31.66■■■□□ 2.66
CDKN1A-205ENST00000459970 NUP160Q12769 1436 aa31.61■■■□□ 2.65
CDKN1A-205ENST00000459970 CEP170Q5SW79 1584 aa31.55■■■□□ 2.64
CDKN1A-205ENST00000459970 SHROOM2Q13796 1616 aa31.46■■■□□ 2.63
CDKN1A-205ENST00000459970 KIF27Q86VH2 1401 aa31.4■■■□□ 2.62
CDKN1A-205ENST00000459970 ERCC6L2Q5T890 1561 aa31.34■■■□□ 2.61
CDKN1A-205ENST00000459970 CUL7Q14999 1698 aa31.33■■■□□ 2.61
CDKN1A-205ENST00000459970 IGF1RP08069 1367 aa31.3■■■□□ 2.6
CDKN1A-205ENST00000459970 RUSC2Q8N2Y8 1516 aa31.3■■■□□ 2.6
CDKN1A-205ENST00000459970 TRHP20396 242 aaPredicted RBP31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms