RNA–Protein interactions for RNA: ENST00000316341.7

SLC12A4-201, Transcript of solute carrier family 12 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC12A4, Length 4,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-201ENST00000316341 NISCHQ9Y2I1 1504 aa31.88■■■□□ 2.69
SLC12A4-201ENST00000316341 DCAF8L2P0C7V8 631 aa31.04■■■□□ 2.56
SLC12A4-201ENST00000316341 SUPT5HO00267 1087 aaKnown RBP30.87■■■□□ 2.53
SLC12A4-201ENST00000316341 SHROOM4Q9ULL8 1493 aa30.56■■■□□ 2.48
SLC12A4-201ENST00000316341 PCGF6Q9BYE7 350 aa29.66■■■□□ 2.34
SLC12A4-201ENST00000316341 EHMT2Q96KQ7 1210 aa29.54■■■□□ 2.32
SLC12A4-201ENST00000316341 FAM9AQ8IZU1 332 aaPredicted RBP28.97■■■□□ 2.23
SLC12A4-201ENST00000316341 HRCP23327 699 aa28.83■■■□□ 2.21
SLC12A4-201ENST00000316341 TTBK1Q5TCY1 1321 aaPredicted RBP28.63■■■□□ 2.17
SLC12A4-201ENST00000316341 PPARGC1BQ86YN6 1023 aaKnown RBP28.62■■■□□ 2.17
SLC12A4-201ENST00000316341 CHIC1Q5VXU3 224 aa28.46■■■□□ 2.15
SLC12A4-201ENST00000316341 LOC105371045A0A1W2PR82 267 aa28.42■■■□□ 2.14
SLC12A4-201ENST00000316341 ZEB1P37275 1124 aaPredicted RBP28.36■■■□□ 2.13
SLC12A4-201ENST00000316341 TRIM41Q8WV44 630 aa28.35■■■□□ 2.13
SLC12A4-201ENST00000316341 CCER1Q8TC90 406 aaPredicted RBP28.24■■■□□ 2.11
SLC12A4-201ENST00000316341 TRIM26Q12899 539 aaPredicted RBP28.23■■■□□ 2.11
SLC12A4-201ENST00000316341 PELP1Q8IZL8 1130 aaKnown RBP28.19■■■□□ 2.1
SLC12A4-201ENST00000316341 CENPBP07199 599 aaPredicted RBP28.1■■■□□ 2.09
SLC12A4-201ENST00000316341 YTHDC1Q96MU7 727 aaKnown RBP27.92■■■□□ 2.06
SLC12A4-201ENST00000316341 APLP2Q06481 763 aa27.9■■■□□ 2.06
SLC12A4-201ENST00000316341 RANGAP1P46060 587 aaPredicted RBP27.81■■■□□ 2.04
SLC12A4-201ENST00000316341 UBTFP17480 764 aaKnown RBP27.61■■■□□ 2.01
SLC12A4-201ENST00000316341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.54■■■□□ 2
SLC12A4-201ENST00000316341 DIEXFQ68CQ4 756 aaKnown RBP27.28■■□□□ 1.96
SLC12A4-201ENST00000316341 MYT1Q01538 1121 aa27.27■■□□□ 1.96
SLC12A4-201ENST00000316341 HNRNPUL2Q1KMD3 747 aaKnown RBP27.18■■□□□ 1.94
SLC12A4-201ENST00000316341 GTF3C3Q9Y5Q9 886 aa27.16■■□□□ 1.94
SLC12A4-201ENST00000316341 MYO15BQ96JP2 1530 aa27.12■■□□□ 1.93
SLC12A4-201ENST00000316341 ATP1B4Q9UN42 357 aaPredicted RBP26.98■■□□□ 1.91
SLC12A4-201ENST00000316341 ERICH6Q7L0X2 663 aa26.94■■□□□ 1.9
SLC12A4-201ENST00000316341 ACIN1Q9UKV3 1341 aaKnown RBP26.91■■□□□ 1.9
SLC12A4-201ENST00000316341 ITGAEP38570 1179 aa26.88■■□□□ 1.89
SLC12A4-201ENST00000316341 NEFLP07196 543 aa26.87■■□□□ 1.89
SLC12A4-201ENST00000316341 DCAF1Q9Y4B6 1507 aa26.85■■□□□ 1.89
SLC12A4-201ENST00000316341 SCAF1Q9H7N4 1312 aaKnown RBP26.84■■□□□ 1.89
SLC12A4-201ENST00000316341 NEUROD1Q13562 356 aa26.67■■□□□ 1.86
SLC12A4-201ENST00000316341 ZCCHC6Q5VYS8 1495 aaKnown RBP26.65■■□□□ 1.86
SLC12A4-201ENST00000316341 ZNF316A6NFI3 1004 aaPredicted RBP26.6■■□□□ 1.85
SLC12A4-201ENST00000316341 BCANQ96GW7 911 aa26.48■■□□□ 1.83
SLC12A4-201ENST00000316341 CNGB1Q14028 1251 aaPredicted RBP26.26■■□□□ 1.79
SLC12A4-201ENST00000316341 ABCC9O60706 1549 aa26.19■■□□□ 1.78
SLC12A4-201ENST00000316341 CSRNP3Q8WYN3 585 aa26.18■■□□□ 1.78
SLC12A4-201ENST00000316341 POLR3GLQ9BT43 218 aa26.12■■□□□ 1.77
SLC12A4-201ENST00000316341 MIER1Q8N108 512 aa26.11■■□□□ 1.77
SLC12A4-201ENST00000316341 PABPN1Q86U42 306 aaKnown RBP eCLIP26.09■■□□□ 1.778e-7■■□□□ 11.4
SLC12A4-201ENST00000316341 FAM50AQ14320 339 aaKnown RBP26.08■■□□□ 1.77
SLC12A4-201ENST00000316341 CCDC180Q9P1Z9 1646 aa26.06■■□□□ 1.76
SLC12A4-201ENST00000316341 SCRIBQ14160 1630 aa26.03■■□□□ 1.76
SLC12A4-201ENST00000316341 RSF1Q96T23 1441 aaPredicted RBP25.86■■□□□ 1.73
SLC12A4-201ENST00000316341 ANP32CO43423 234 aa25.84■■□□□ 1.73
SLC12A4-201ENST00000316341 FKBP8Q14318 412 aa25.83■■□□□ 1.73
SLC12A4-201ENST00000316341 DDX10Q13206 875 aaKnown RBP25.71■■□□□ 1.71
SLC12A4-201ENST00000316341 CDK11AQ9UQ88 783 aaPredicted RBP25.69■■□□□ 1.7
SLC12A4-201ENST00000316341 P3H3Q8IVL6 736 aa25.66■■□□□ 1.7
SLC12A4-201ENST00000316341 TRIM52Q96A61 297 aa25.65■■□□□ 1.7
SLC12A4-201ENST00000316341 CEP162Q5TB80 1403 aa25.62■■□□□ 1.69
SLC12A4-201ENST00000316341 RTL5Q5HYW3 569 aaPredicted RBP25.61■■□□□ 1.69
SLC12A4-201ENST00000316341 DAXXQ9UER7 740 aaPredicted RBP25.57■■□□□ 1.68
SLC12A4-201ENST00000316341 HIRIP3Q9BW71 556 aaPredicted RBP25.55■■□□□ 1.68
SLC12A4-201ENST00000316341 CLSPNQ9HAW4 1339 aa25.55■■□□□ 1.68
SLC12A4-201ENST00000316341 ZNF326Q5BKZ1 582 aaKnown RBP25.44■■□□□ 1.66
SLC12A4-201ENST00000316341 HNRNPUQ00839 825 aaKnown RBP eCLIP25.44■■□□□ 1.66
SLC12A4-201ENST00000316341 CLIP1P30622 1438 aa25.43■■□□□ 1.66
SLC12A4-201ENST00000316341 IRX6P78412 446 aaPredicted RBP25.4■■□□□ 1.66
SLC12A4-201ENST00000316341 SUPT16HQ9Y5B9 1047 aaKnown RBP25.35■■□□□ 1.65
SLC12A4-201ENST00000316341 RB1CC1Q8TDY2 1594 aa25.32■■□□□ 1.64
SLC12A4-201ENST00000316341 ARID3CA6NKF2 412 aa25.31■■□□□ 1.64
SLC12A4-201ENST00000316341 TNIKQ9UKE5 1360 aa25.3■■□□□ 1.64
SLC12A4-201ENST00000316341 CECR2Q9BXF3 1484 aa25.29■■□□□ 1.64
SLC12A4-201ENST00000316341 ANP32EQ9BTT0 268 aa25.27■■□□□ 1.64
SLC12A4-201ENST00000316341 FAM9BQ8IZU0 186 aa25.26■■□□□ 1.63
SLC12A4-201ENST00000316341 TONSLQ96HA7 1378 aa25.25■■□□□ 1.63
SLC12A4-201ENST00000316341 GOLGA3Q08378 1498 aa25.24■■□□□ 1.63
SLC12A4-201ENST00000316341 SOGA1O94964 1423 aa25.21■■□□□ 1.63
SLC12A4-201ENST00000316341 NPM2Q86SE8 214 aaKnown RBP25.2■■□□□ 1.62
SLC12A4-201ENST00000316341 NBR1Q14596 966 aa25.15■■□□□ 1.62
SLC12A4-201ENST00000316341 ANP32AP39687 249 aaKnown RBP25.13■■□□□ 1.61
SLC12A4-201ENST00000316341 EEA1Q15075 1411 aa25.1■■□□□ 1.61
SLC12A4-201ENST00000316341 SIN3AQ96ST3 1273 aa25.07■■□□□ 1.6
SLC12A4-201ENST00000316341 CHIC2Q9UKJ5 165 aa25.06■■□□□ 1.6
SLC12A4-201ENST00000316341 WRNQ14191 1432 aaPredicted RBP eCLIP25.06■■□□□ 1.6
SLC12A4-201ENST00000316341 MYT1LQ9UL68 1186 aa25.03■■□□□ 1.6
SLC12A4-201ENST00000316341 SENP3-EIF4A1A0A087X0R7 540 aa25.01■■□□□ 1.59
SLC12A4-201ENST00000316341 SALL2Q9Y467 1007 aaPredicted RBP25.01■■□□□ 1.59
SLC12A4-201ENST00000316341 CCDC88BA6NC98 1476 aa25■■□□□ 1.59
SLC12A4-201ENST00000316341 MRS2Q9HD23 443 aa24.99■■□□□ 1.59
SLC12A4-201ENST00000316341 ABCC8Q09428 1581 aa24.99■■□□□ 1.59
SLC12A4-201ENST00000316341 SLC4A1APQ9BWU0 796 aaKnown RBP24.97■■□□□ 1.59
SLC12A4-201ENST00000316341 MROH2BQ7Z745 1585 aa24.97■■□□□ 1.59
SLC12A4-201ENST00000316341 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
SLC12A4-201ENST00000316341 CCDC136Q96JN2 1154 aa24.93■■□□□ 1.58
SLC12A4-201ENST00000316341 TSHZ2Q9NRE2 1034 aa24.93■■□□□ 1.58
SLC12A4-201ENST00000316341 ZNF777Q9ULD5 760 aaPredicted RBP24.87■■□□□ 1.57
SLC12A4-201ENST00000316341 KANK4Q5T7N3 995 aaPredicted RBP24.86■■□□□ 1.57
SLC12A4-201ENST00000316341 BCL11AQ9H165 835 aa24.84■■□□□ 1.57
SLC12A4-201ENST00000316341 RBM19Q9Y4C8 960 aaKnown RBP24.84■■□□□ 1.57
SLC12A4-201ENST00000316341 KCNH8Q96L42 1107 aa24.83■■□□□ 1.56
SLC12A4-201ENST00000316341 ZBTB47Q9UFB7 747 aaPredicted RBP24.82■■□□□ 1.56
SLC12A4-201ENST00000316341 RRP7BPQ9NSQ0 103 aa24.82■■□□□ 1.56
SLC12A4-201ENST00000316341 VPS8Q8N3P4 1428 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms