RNA–Protein interactions for RNA: ENST00000576616.5

SLC12A4-219, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-219ENST00000576616 NISCHQ9Y2I1 1504 aa23.04■■□□□ 1.28
SLC12A4-219ENST00000576616 SHROOM4Q9ULL8 1493 aa20.12■□□□□ 0.81
SLC12A4-219ENST00000576616 DCAF8L2P0C7V8 631 aa20.09■□□□□ 0.81
SLC12A4-219ENST00000576616 SUPT5HO00267 1087 aaKnown RBP19.76■□□□□ 0.75
SLC12A4-219ENST00000576616 CCDC180Q9P1Z9 1646 aa19.4■□□□□ 0.7
SLC12A4-219ENST00000576616 ZCCHC6Q5VYS8 1495 aaKnown RBP19.36■□□□□ 0.69
SLC12A4-219ENST00000576616 ABCC9O60706 1549 aa18.81■□□□□ 0.6
SLC12A4-219ENST00000576616 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
SLC12A4-219ENST00000576616 DCAF1Q9Y4B6 1507 aa18.66■□□□□ 0.58
SLC12A4-219ENST00000576616 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
SLC12A4-219ENST00000576616 MYO15BQ96JP2 1530 aa18.43■□□□□ 0.54
SLC12A4-219ENST00000576616 LOC105371045A0A1W2PR82 267 aa18.42■□□□□ 0.54
SLC12A4-219ENST00000576616 EHMT2Q96KQ7 1210 aa18.39■□□□□ 0.54
SLC12A4-219ENST00000576616 FAM9AQ8IZU1 332 aaPredicted RBP18.36■□□□□ 0.53
SLC12A4-219ENST00000576616 TRIM41Q8WV44 630 aa18.31■□□□□ 0.52
SLC12A4-219ENST00000576616 PCGF6Q9BYE7 350 aa18.3■□□□□ 0.52
SLC12A4-219ENST00000576616 RSF1Q96T23 1441 aaPredicted RBP18.27■□□□□ 0.51
SLC12A4-219ENST00000576616 NACADO15069 1562 aa18.17■□□□□ 0.5
SLC12A4-219ENST00000576616 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.58e-7■■□□□ 11.4
SLC12A4-219ENST00000576616 CECR2Q9BXF3 1484 aa18.13■□□□□ 0.49
SLC12A4-219ENST00000576616 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
SLC12A4-219ENST00000576616 MROH2BQ7Z745 1585 aa17.97■□□□□ 0.47
SLC12A4-219ENST00000576616 HRCP23327 699 aa17.9■□□□□ 0.46
SLC12A4-219ENST00000576616 WIZO95785 1651 aa17.82■□□□□ 0.44
SLC12A4-219ENST00000576616 PPARGC1BQ86YN6 1023 aaKnown RBP17.82■□□□□ 0.44
SLC12A4-219ENST00000576616 TRIM26Q12899 539 aaPredicted RBP17.79■□□□□ 0.44
SLC12A4-219ENST00000576616 BAZ1AQ9NRL2 1556 aaPredicted RBP17.73■□□□□ 0.43
SLC12A4-219ENST00000576616 TTBK1Q5TCY1 1321 aaPredicted RBP17.71■□□□□ 0.43
SLC12A4-219ENST00000576616 PELP1Q8IZL8 1130 aaKnown RBP17.7■□□□□ 0.42
SLC12A4-219ENST00000576616 UBTFP17480 764 aaKnown RBP17.59■□□□□ 0.41
SLC12A4-219ENST00000576616 CCDC88BA6NC98 1476 aa17.55■□□□□ 0.4
SLC12A4-219ENST00000576616 SMARCA4P51532 1647 aa17.53■□□□□ 0.4
SLC12A4-219ENST00000576616 RANGAP1P46060 587 aaPredicted RBP17.52■□□□□ 0.39
SLC12A4-219ENST00000576616 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
SLC12A4-219ENST00000576616 TOP2AP11388 1531 aaKnown RBP17.47■□□□□ 0.39
SLC12A4-219ENST00000576616 MYT1Q01538 1121 aa17.45■□□□□ 0.38
SLC12A4-219ENST00000576616 UNC13AQ9UPW8 1703 aa17.44■□□□□ 0.38
SLC12A4-219ENST00000576616 CSRNP3Q8WYN3 585 aa17.41■□□□□ 0.38
SLC12A4-219ENST00000576616 SMARCA2P51531 1590 aa17.37■□□□□ 0.37
SLC12A4-219ENST00000576616 SOGA1O94964 1423 aa17.36■□□□□ 0.37
SLC12A4-219ENST00000576616 BICRAQ9NZM4 1560 aa17.35■□□□□ 0.37
SLC12A4-219ENST00000576616 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.36
SLC12A4-219ENST00000576616 CCER1Q8TC90 406 aaPredicted RBP17.31■□□□□ 0.36
SLC12A4-219ENST00000576616 BAZ1BQ9UIG0 1483 aaKnown RBP17.3■□□□□ 0.36
SLC12A4-219ENST00000576616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.3■□□□□ 0.36
SLC12A4-219ENST00000576616 WRNQ14191 1432 aaPredicted RBP eCLIP17.28■□□□□ 0.36
SLC12A4-219ENST00000576616 ATAD2BQ9ULI0 1458 aa17.25■□□□□ 0.35
SLC12A4-219ENST00000576616 RUSC2Q8N2Y8 1516 aa17.24■□□□□ 0.35
SLC12A4-219ENST00000576616 APLP2Q06481 763 aa17.23■□□□□ 0.35
SLC12A4-219ENST00000576616 CEP162Q5TB80 1403 aa17.19■□□□□ 0.34
SLC12A4-219ENST00000576616 EIF4G1Q04637 1599 aaKnown RBP17.15■□□□□ 0.34
SLC12A4-219ENST00000576616 TNIKQ9UKE5 1360 aa17.12■□□□□ 0.33
SLC12A4-219ENST00000576616 EEA1Q15075 1411 aa17.11■□□□□ 0.33
SLC12A4-219ENST00000576616 HNRNPUL2Q1KMD3 747 aaKnown RBP17.1■□□□□ 0.33
SLC12A4-219ENST00000576616 GOLGA3Q08378 1498 aa17.07■□□□□ 0.32
SLC12A4-219ENST00000576616 PEG3Q9GZU2 1588 aa17■□□□□ 0.31
SLC12A4-219ENST00000576616 SYNJ1O43426 1573 aa16.99■□□□□ 0.31
SLC12A4-219ENST00000576616 CLIP1P30622 1438 aa16.98■□□□□ 0.31
SLC12A4-219ENST00000576616 CEP164Q9UPV0 1460 aa16.97■□□□□ 0.31
SLC12A4-219ENST00000576616 ATP1B4Q9UN42 357 aaPredicted RBP16.9■□□□□ 0.3
SLC12A4-219ENST00000576616 RAPGEF2Q9Y4G8 1499 aa16.9■□□□□ 0.3
SLC12A4-219ENST00000576616 NCAPD3P42695 1498 aa16.89■□□□□ 0.29
SLC12A4-219ENST00000576616 ITGAEP38570 1179 aa16.84■□□□□ 0.29
SLC12A4-219ENST00000576616 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
SLC12A4-219ENST00000576616 KIF27Q86VH2 1401 aa16.79■□□□□ 0.28
SLC12A4-219ENST00000576616 P3H3Q8IVL6 736 aa16.79■□□□□ 0.28
SLC12A4-219ENST00000576616 VPS8Q8N3P4 1428 aa16.76■□□□□ 0.27
SLC12A4-219ENST00000576616 HMGXB3Q12766 1538 aa16.74■□□□□ 0.27
SLC12A4-219ENST00000576616 DIEXFQ68CQ4 756 aaKnown RBP16.74■□□□□ 0.27
SLC12A4-219ENST00000576616 TOP2BQ02880 1626 aa16.73■□□□□ 0.27
SLC12A4-219ENST00000576616 CADPSQ9ULU8 1353 aa16.72■□□□□ 0.27
SLC12A4-219ENST00000576616 CFTRP13569 1480 aa16.71■□□□□ 0.27
SLC12A4-219ENST00000576616 KIF21BO75037 1637 aa16.71■□□□□ 0.27
SLC12A4-219ENST00000576616 CUX2O14529 1486 aa16.71■□□□□ 0.26
SLC12A4-219ENST00000576616 CUX1P39880 1505 aa16.7■□□□□ 0.26
SLC12A4-219ENST00000576616 KANK4Q5T7N3 995 aaPredicted RBP16.69■□□□□ 0.26
SLC12A4-219ENST00000576616 CARMIL1Q5VZK9 1371 aa16.61■□□□□ 0.25
SLC12A4-219ENST00000576616 PRXQ9BXM0 1461 aa16.6■□□□□ 0.25
SLC12A4-219ENST00000576616 CC2D2AQ9P2K1 1620 aa16.59■□□□□ 0.25
SLC12A4-219ENST00000576616 ZNF316A6NFI3 1004 aaPredicted RBP16.59■□□□□ 0.25
SLC12A4-219ENST00000576616 YTHDC1Q96MU7 727 aaKnown RBP16.58■□□□□ 0.25
SLC12A4-219ENST00000576616 FAM50AQ14320 339 aaKnown RBP16.58■□□□□ 0.24
SLC12A4-219ENST00000576616 IGF1RP08069 1367 aa16.58■□□□□ 0.24
SLC12A4-219ENST00000576616 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
SLC12A4-219ENST00000576616 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
SLC12A4-219ENST00000576616 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
SLC12A4-219ENST00000576616 NESP48681 1621 aa16.53■□□□□ 0.24
SLC12A4-219ENST00000576616 ARAP1Q96P48 1450 aa16.53■□□□□ 0.24
SLC12A4-219ENST00000576616 ERICH3Q5RHP9 1530 aa16.51■□□□□ 0.23
SLC12A4-219ENST00000576616 RAD54L2Q9Y4B4 1467 aa16.5■□□□□ 0.23
SLC12A4-219ENST00000576616 CENPBP07199 599 aaPredicted RBP16.48■□□□□ 0.23
SLC12A4-219ENST00000576616 TDRD9Q8NDG6 1382 aaKnown RBP16.45■□□□□ 0.22
SLC12A4-219ENST00000576616 ARHGAP35Q9NRY4 1499 aa16.44■□□□□ 0.22
SLC12A4-219ENST00000576616 FBLN2P98095 1184 aa16.43■□□□□ 0.22
SLC12A4-219ENST00000576616 ARID3CA6NKF2 412 aa16.42■□□□□ 0.22
SLC12A4-219ENST00000576616 CCNB3Q8WWL7 1395 aa16.4■□□□□ 0.22
SLC12A4-219ENST00000576616 SCAF1Q9H7N4 1312 aaKnown RBP16.4■□□□□ 0.22
SLC12A4-219ENST00000576616 NEUROD1Q13562 356 aa16.39■□□□□ 0.22
SLC12A4-219ENST00000576616 FHOD3Q2V2M9 1422 aa16.36■□□□□ 0.21
SLC12A4-219ENST00000576616 MIER1Q8N108 512 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms