RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 NISCHQ9Y2I1 1504 aa36.07■■■■□ 3.36
SHANK2-204ENST00000409530 CCDC180Q9P1Z9 1646 aa31.59■■■□□ 2.65
SHANK2-204ENST00000409530 ABCC9O60706 1549 aa30.35■■■□□ 2.45
SHANK2-204ENST00000409530 ZCCHC6Q5VYS8 1495 aaKnown RBP30.24■■■□□ 2.43
SHANK2-204ENST00000409530 DCAF8L2P0C7V8 631 aa30.16■■■□□ 2.42
SHANK2-204ENST00000409530 DCAF1Q9Y4B6 1507 aa29.67■■■□□ 2.34
SHANK2-204ENST00000409530 SHROOM4Q9ULL8 1493 aa29.51■■■□□ 2.31
SHANK2-204ENST00000409530 NACADO15069 1562 aa29.45■■■□□ 2.31
SHANK2-204ENST00000409530 MYO15BQ96JP2 1530 aa29.39■■■□□ 2.3
SHANK2-204ENST00000409530 RB1CC1Q8TDY2 1594 aa29.36■■■□□ 2.29
SHANK2-204ENST00000409530 SCRIBQ14160 1630 aa29.22■■■□□ 2.27
SHANK2-204ENST00000409530 UNC13AQ9UPW8 1703 aa28.87■■■□□ 2.21
SHANK2-204ENST00000409530 PABPN1Q86U42 306 aaKnown RBP eCLIP28.57■■■□□ 2.16
SHANK2-204ENST00000409530 BICRAQ9NZM4 1560 aa28.48■■■□□ 2.15
SHANK2-204ENST00000409530 SUPT5HO00267 1087 aaKnown RBP28.16■■■□□ 2.1
SHANK2-204ENST00000409530 CECR2Q9BXF3 1484 aa28.15■■■□□ 2.1
SHANK2-204ENST00000409530 MROH2BQ7Z745 1585 aa27.93■■■□□ 2.06
SHANK2-204ENST00000409530 BAZ1AQ9NRL2 1556 aaPredicted RBP27.89■■■□□ 2.06
SHANK2-204ENST00000409530 RSF1Q96T23 1441 aaPredicted RBP27.87■■■□□ 2.05
SHANK2-204ENST00000409530 SMARCA4P51532 1647 aa27.86■■■□□ 2.05
SHANK2-204ENST00000409530 WIZO95785 1651 aa27.75■■■□□ 2.03
SHANK2-204ENST00000409530 EIF4G1Q04637 1599 aaKnown RBP27.69■■■□□ 2.02
SHANK2-204ENST00000409530 ATAD2BQ9ULI0 1458 aa27.42■■□□□ 1.98
SHANK2-204ENST00000409530 CC2D2AQ9P2K1 1620 aa27.39■■□□□ 1.98
SHANK2-204ENST00000409530 SMARCA2P51531 1590 aa27.39■■□□□ 1.98
SHANK2-204ENST00000409530 PEG3Q9GZU2 1588 aa27.39■■□□□ 1.98
SHANK2-204ENST00000409530 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
SHANK2-204ENST00000409530 BAZ1BQ9UIG0 1483 aaKnown RBP27.32■■□□□ 1.96
SHANK2-204ENST00000409530 NCAPD3P42695 1498 aa27.16■■□□□ 1.94
SHANK2-204ENST00000409530 HMGXB3Q12766 1538 aa27.15■■□□□ 1.94
SHANK2-204ENST00000409530 CCDC88BA6NC98 1476 aa27.07■■□□□ 1.92
SHANK2-204ENST00000409530 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
SHANK2-204ENST00000409530 CHIC1Q5VXU3 224 aa26.62■■□□□ 1.85
SHANK2-204ENST00000409530 ABCC8Q09428 1581 aa26.55■■□□□ 1.84
SHANK2-204ENST00000409530 NESP48681 1621 aa26.54■■□□□ 1.84
SHANK2-204ENST00000409530 CFTRP13569 1480 aa26.51■■□□□ 1.83
SHANK2-204ENST00000409530 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
SHANK2-204ENST00000409530 PRDM2Q13029 1718 aa26.46■■□□□ 1.83
SHANK2-204ENST00000409530 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
SHANK2-204ENST00000409530 LAMC3Q9Y6N6 1575 aa26.36■■□□□ 1.81
SHANK2-204ENST00000409530 FANCD2Q9BXW9 1451 aa26.28■■□□□ 1.8
SHANK2-204ENST00000409530 WRNQ14191 1432 aaPredicted RBP eCLIP26.28■■□□□ 1.8
SHANK2-204ENST00000409530 SYNJ1O43426 1573 aa26.25■■□□□ 1.79
SHANK2-204ENST00000409530 KIF21AQ7Z4S6 1674 aa26.23■■□□□ 1.79
SHANK2-204ENST00000409530 CEP164Q9UPV0 1460 aa26.16■■□□□ 1.78
SHANK2-204ENST00000409530 PDS5BQ9NTI5 1447 aa26.16■■□□□ 1.78
SHANK2-204ENST00000409530 CUX1P39880 1505 aa26.14■■□□□ 1.77
SHANK2-204ENST00000409530 TOP2BQ02880 1626 aa26.09■■□□□ 1.77
SHANK2-204ENST00000409530 FAM9AQ8IZU1 332 aaPredicted RBP26.08■■□□□ 1.76
SHANK2-204ENST00000409530 BIVM-ERCC5R4GMW8 1640 aa26.07■■□□□ 1.76
SHANK2-204ENST00000409530 ERCC6Q03468 1493 aa26.05■■□□□ 1.76
SHANK2-204ENST00000409530 URB2Q14146 1524 aaKnown RBP25.98■■□□□ 1.75
SHANK2-204ENST00000409530 DNMBPQ6XZF7 1577 aa25.97■■□□□ 1.75
SHANK2-204ENST00000409530 TOPBP1Q92547 1522 aa25.95■■□□□ 1.75
SHANK2-204ENST00000409530 FGD5Q6ZNL6 1462 aa25.92■■□□□ 1.74
SHANK2-204ENST00000409530 SOGA1O94964 1423 aa25.91■■□□□ 1.74
SHANK2-204ENST00000409530 MRC2Q9UBG0 1479 aa25.89■■□□□ 1.73
SHANK2-204ENST00000409530 EHMT2Q96KQ7 1210 aa25.88■■□□□ 1.73
SHANK2-204ENST00000409530 RUSC2Q8N2Y8 1516 aa25.85■■□□□ 1.73
SHANK2-204ENST00000409530 POLA1P09884 1462 aaPredicted RBP25.82■■□□□ 1.72
SHANK2-204ENST00000409530 THOC2Q8NI27 1593 aaKnown RBP25.8■■□□□ 1.72
SHANK2-204ENST00000409530 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
SHANK2-204ENST00000409530 WDR62O43379 1518 aa25.74■■□□□ 1.71
SHANK2-204ENST00000409530 LOC105371045A0A1W2PR82 267 aa25.71■■□□□ 1.71
SHANK2-204ENST00000409530 CUX2O14529 1486 aa25.7■■□□□ 1.71
SHANK2-204ENST00000409530 KIF27Q86VH2 1401 aa25.62■■□□□ 1.69
SHANK2-204ENST00000409530 EEA1Q15075 1411 aa25.61■■□□□ 1.69
SHANK2-204ENST00000409530 WDR97A6NE52 1622 aa25.61■■□□□ 1.69
SHANK2-204ENST00000409530 CSRNP3Q8WYN3 585 aa25.58■■□□□ 1.69
SHANK2-204ENST00000409530 ABCA10Q8WWZ4 1543 aa25.58■■□□□ 1.69
SHANK2-204ENST00000409530 TARBP1Q13395 1621 aaKnown RBP25.58■■□□□ 1.68
SHANK2-204ENST00000409530 TDRD9Q8NDG6 1382 aaKnown RBP25.55■■□□□ 1.68
SHANK2-204ENST00000409530 IFT140Q96RY7 1462 aa25.48■■□□□ 1.67
SHANK2-204ENST00000409530 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
SHANK2-204ENST00000409530 ABCA5Q8WWZ7 1642 aa25.46■■□□□ 1.67
SHANK2-204ENST00000409530 AQRO60306 1485 aaKnown RBP eCLIP25.44■■□□□ 1.665e-7■■■■■ 27.6
SHANK2-204ENST00000409530 GAPVD1Q14C86 1478 aa25.43■■□□□ 1.66
SHANK2-204ENST00000409530 EIF4G3O43432 1585 aaKnown RBP25.4■■□□□ 1.66
SHANK2-204ENST00000409530 KIF21BO75037 1637 aa25.4■■□□□ 1.66
SHANK2-204ENST00000409530 PBRM1Q86U86 1689 aa25.39■■□□□ 1.66
SHANK2-204ENST00000409530 RAPGEF2Q9Y4G8 1499 aa25.39■■□□□ 1.66
SHANK2-204ENST00000409530 IGF1RP08069 1367 aa25.38■■□□□ 1.65
SHANK2-204ENST00000409530 GOLGA3Q08378 1498 aa25.37■■□□□ 1.65
SHANK2-204ENST00000409530 UBTFP17480 764 aaKnown RBP25.37■■□□□ 1.65
SHANK2-204ENST00000409530 PRXQ9BXM0 1461 aa25.32■■□□□ 1.64
SHANK2-204ENST00000409530 CARMIL1Q5VZK9 1371 aa25.29■■□□□ 1.64
SHANK2-204ENST00000409530 ERICH3Q5RHP9 1530 aa25.28■■□□□ 1.64
SHANK2-204ENST00000409530 CUL7Q14999 1698 aa25.27■■□□□ 1.64
SHANK2-204ENST00000409530 RANGAP1P46060 587 aaPredicted RBP25.26■■□□□ 1.63
SHANK2-204ENST00000409530 GRIN2BQ13224 1484 aa25.25■■□□□ 1.63
SHANK2-204ENST00000409530 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
SHANK2-204ENST00000409530 ADAMTS12P58397 1594 aa25.18■■□□□ 1.62
SHANK2-204ENST00000409530 TNIKQ9UKE5 1360 aa25.15■■□□□ 1.62
SHANK2-204ENST00000409530 CEP162Q5TB80 1403 aa25.12■■□□□ 1.61
SHANK2-204ENST00000409530 FBLN2P98095 1184 aa25.1■■□□□ 1.61
SHANK2-204ENST00000409530 FHAD1B1AJZ9 1412 aa25.09■■□□□ 1.61
SHANK2-204ENST00000409530 MAGI1Q96QZ7 1491 aaPredicted RBP25.05■■□□□ 1.6
SHANK2-204ENST00000409530 CTTNBP2Q8WZ74 1663 aa25.03■■□□□ 1.6
SHANK2-204ENST00000409530 CHMP7Q8WUX9 453 aaPredicted RBP25■■□□□ 1.59
SHANK2-204ENST00000409530 CLIP1P30622 1438 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms