RNA–Protein interactions for RNA: ENST00000591092.5

RANBP3-220, Transcript of RAN binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RANBP3, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-220ENST00000591092 NISCHQ9Y2I1 1504 aa40.23■■■■■ 4.03
RANBP3-220ENST00000591092 CCDC180Q9P1Z9 1646 aa35.29■■■■□ 3.24
RANBP3-220ENST00000591092 ABCC9O60706 1549 aa33.81■■■■□ 3
RANBP3-220ENST00000591092 ZCCHC6Q5VYS8 1495 aaKnown RBP33.7■■■□□ 2.99
RANBP3-220ENST00000591092 DCAF8L2P0C7V8 631 aa33.43■■■□□ 2.94
RANBP3-220ENST00000591092 DCAF1Q9Y4B6 1507 aa33.23■■■□□ 2.91
RANBP3-220ENST00000591092 MYO15BQ96JP2 1530 aa33.01■■■□□ 2.87
RANBP3-220ENST00000591092 NACADO15069 1562 aa32.97■■■□□ 2.87
RANBP3-220ENST00000591092 RB1CC1Q8TDY2 1594 aa32.81■■■□□ 2.84
RANBP3-220ENST00000591092 SHROOM4Q9ULL8 1493 aa32.55■■■□□ 2.8
RANBP3-220ENST00000591092 SCRIBQ14160 1630 aa32.43■■■□□ 2.78
RANBP3-220ENST00000591092 UNC13AQ9UPW8 1703 aa32.15■■■□□ 2.74
RANBP3-220ENST00000591092 BICRAQ9NZM4 1560 aa31.82■■■□□ 2.69
RANBP3-220ENST00000591092 PABPN1Q86U42 306 aaKnown RBP eCLIP31.8■■■□□ 2.688e-7■■□□□ 12.1
RANBP3-220ENST00000591092 CECR2Q9BXF3 1484 aa31.32■■■□□ 2.6
RANBP3-220ENST00000591092 BAZ1AQ9NRL2 1556 aaPredicted RBP31.1■■■□□ 2.57
RANBP3-220ENST00000591092 SUPT5HO00267 1087 aaKnown RBP31.1■■■□□ 2.57
RANBP3-220ENST00000591092 MROH2BQ7Z745 1585 aa31.08■■■□□ 2.57
RANBP3-220ENST00000591092 RSF1Q96T23 1441 aaPredicted RBP31.04■■■□□ 2.56
RANBP3-220ENST00000591092 SMARCA4P51532 1647 aa31.03■■■□□ 2.56
RANBP3-220ENST00000591092 EIF4G1Q04637 1599 aaKnown RBP30.91■■■□□ 2.54
RANBP3-220ENST00000591092 WIZO95785 1651 aa30.81■■■□□ 2.52
RANBP3-220ENST00000591092 PEG3Q9GZU2 1588 aa30.64■■■□□ 2.5
RANBP3-220ENST00000591092 ATAD2BQ9ULI0 1458 aa30.63■■■□□ 2.49
RANBP3-220ENST00000591092 SMARCA2P51531 1590 aa30.6■■■□□ 2.49
RANBP3-220ENST00000591092 CC2D2AQ9P2K1 1620 aa30.58■■■□□ 2.49
RANBP3-220ENST00000591092 TOP2AP11388 1531 aaKnown RBP30.46■■■□□ 2.47
RANBP3-220ENST00000591092 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
RANBP3-220ENST00000591092 NCAPD3P42695 1498 aa30.42■■■□□ 2.46
RANBP3-220ENST00000591092 HMGXB3Q12766 1538 aa30.35■■■□□ 2.45
RANBP3-220ENST00000591092 DNAJC5BQ9UF47 199 aa30.22■■■□□ 2.43
RANBP3-220ENST00000591092 CCDC88BA6NC98 1476 aa30.15■■■□□ 2.42
RANBP3-220ENST00000591092 CFTRP13569 1480 aa29.64■■■□□ 2.33
RANBP3-220ENST00000591092 CADPSQ9ULU8 1353 aa29.63■■■□□ 2.33
RANBP3-220ENST00000591092 NESP48681 1621 aa29.54■■■□□ 2.32
RANBP3-220ENST00000591092 CHIC1Q5VXU3 224 aa29.49■■■□□ 2.31
RANBP3-220ENST00000591092 LAMC3Q9Y6N6 1575 aa29.48■■■□□ 2.31
RANBP3-220ENST00000591092 PRDM2Q13029 1718 aa29.48■■■□□ 2.31
RANBP3-220ENST00000591092 ABCC8Q09428 1581 aa29.39■■■□□ 2.3
RANBP3-220ENST00000591092 FANCD2Q9BXW9 1451 aa29.31■■■□□ 2.28
RANBP3-220ENST00000591092 PDS5BQ9NTI5 1447 aa29.26■■■□□ 2.27
RANBP3-220ENST00000591092 TRIM41Q8WV44 630 aa29.25■■■□□ 2.27
RANBP3-220ENST00000591092 WRNQ14191 1432 aaPredicted RBP eCLIP29.24■■■□□ 2.275e-6■■■■■ 29.2
RANBP3-220ENST00000591092 KIF21AQ7Z4S6 1674 aa29.19■■■□□ 2.26
RANBP3-220ENST00000591092 CEP164Q9UPV0 1460 aa29.18■■■□□ 2.26
RANBP3-220ENST00000591092 SYNJ1O43426 1573 aa29.14■■■□□ 2.26
RANBP3-220ENST00000591092 CUX1P39880 1505 aa29.09■■■□□ 2.25
RANBP3-220ENST00000591092 TOP2BQ02880 1626 aa29.05■■■□□ 2.24
RANBP3-220ENST00000591092 ERCC6Q03468 1493 aa29.04■■■□□ 2.24
RANBP3-220ENST00000591092 BIVM-ERCC5R4GMW8 1640 aa29.03■■■□□ 2.24
RANBP3-220ENST00000591092 URB2Q14146 1524 aaKnown RBP28.97■■■□□ 2.23
RANBP3-220ENST00000591092 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
RANBP3-220ENST00000591092 TOPBP1Q92547 1522 aa28.95■■■□□ 2.22
RANBP3-220ENST00000591092 MRC2Q9UBG0 1479 aa28.92■■■□□ 2.22
RANBP3-220ENST00000591092 FGD5Q6ZNL6 1462 aa28.85■■■□□ 2.21
RANBP3-220ENST00000591092 THOC2Q8NI27 1593 aaKnown RBP28.81■■■□□ 2.2
RANBP3-220ENST00000591092 WDR62O43379 1518 aa28.78■■■□□ 2.2
RANBP3-220ENST00000591092 POLA1P09884 1462 aaPredicted RBP28.77■■■□□ 2.2
RANBP3-220ENST00000591092 SOGA1O94964 1423 aa28.74■■■□□ 2.19
RANBP3-220ENST00000591092 FAM9AQ8IZU1 332 aaPredicted RBP28.73■■■□□ 2.19
RANBP3-220ENST00000591092 RAD54L2Q9Y4B4 1467 aa28.69■■■□□ 2.18
RANBP3-220ENST00000591092 RUSC2Q8N2Y8 1516 aa28.66■■■□□ 2.18
RANBP3-220ENST00000591092 CUX2O14529 1486 aa28.59■■■□□ 2.17
RANBP3-220ENST00000591092 ABCA10Q8WWZ4 1543 aa28.57■■■□□ 2.16
RANBP3-220ENST00000591092 EEA1Q15075 1411 aa28.55■■■□□ 2.16
RANBP3-220ENST00000591092 TARBP1Q13395 1621 aaKnown RBP28.54■■■□□ 2.16
RANBP3-220ENST00000591092 KIF27Q86VH2 1401 aa28.54■■■□□ 2.16
RANBP3-220ENST00000591092 WDR97A6NE52 1622 aa28.52■■■□□ 2.16
RANBP3-220ENST00000591092 IFT140Q96RY7 1462 aa28.49■■■□□ 2.15
RANBP3-220ENST00000591092 CSRNP3Q8WYN3 585 aa28.46■■■□□ 2.15
RANBP3-220ENST00000591092 TDRD9Q8NDG6 1382 aaKnown RBP28.45■■■□□ 2.14
RANBP3-220ENST00000591092 ABCA5Q8WWZ7 1642 aa28.38■■■□□ 2.13
RANBP3-220ENST00000591092 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
RANBP3-220ENST00000591092 LOC105371045A0A1W2PR82 267 aa28.37■■■□□ 2.13
RANBP3-220ENST00000591092 EHMT2Q96KQ7 1210 aa28.37■■■□□ 2.13
RANBP3-220ENST00000591092 GAPVD1Q14C86 1478 aa28.35■■■□□ 2.13
RANBP3-220ENST00000591092 AQRO60306 1485 aaKnown RBP eCLIP28.34■■■□□ 2.135e-8■■■■■ 30.4
RANBP3-220ENST00000591092 IGF1RP08069 1367 aa28.32■■■□□ 2.12
RANBP3-220ENST00000591092 EIF4G3O43432 1585 aaKnown RBP28.27■■■□□ 2.12
RANBP3-220ENST00000591092 PBRM1Q86U86 1689 aa28.24■■■□□ 2.11
RANBP3-220ENST00000591092 KIF21BO75037 1637 aa28.22■■■□□ 2.11
RANBP3-220ENST00000591092 ERICH3Q5RHP9 1530 aa28.22■■■□□ 2.11
RANBP3-220ENST00000591092 PRXQ9BXM0 1461 aa28.21■■■□□ 2.11
RANBP3-220ENST00000591092 GRIN2BQ13224 1484 aa28.19■■■□□ 2.1
RANBP3-220ENST00000591092 CARMIL1Q5VZK9 1371 aa28.18■■■□□ 2.1
RANBP3-220ENST00000591092 RAPGEF2Q9Y4G8 1499 aa28.17■■■□□ 2.1
RANBP3-220ENST00000591092 GOLGA3Q08378 1498 aa28.16■■■□□ 2.1
RANBP3-220ENST00000591092 CUL7Q14999 1698 aa28.15■■■□□ 2.1
RANBP3-220ENST00000591092 UBTFP17480 764 aaKnown RBP28.09■■■□□ 2.09
RANBP3-220ENST00000591092 SNAPC4Q5SXM2 1469 aa28.08■■■□□ 2.09
RANBP3-220ENST00000591092 ADAMTS12P58397 1594 aa28.05■■■□□ 2.08
RANBP3-220ENST00000591092 FHAD1B1AJZ9 1412 aa28.03■■■□□ 2.08
RANBP3-220ENST00000591092 MAGI1Q96QZ7 1491 aaPredicted RBP28■■■□□ 2.07
RANBP3-220ENST00000591092 TNIKQ9UKE5 1360 aa27.97■■■□□ 2.07
RANBP3-220ENST00000591092 SYNJ2O15056 1496 aa27.9■■■□□ 2.06
RANBP3-220ENST00000591092 FBLN2P98095 1184 aa27.88■■■□□ 2.05
RANBP3-220ENST00000591092 CHMP7Q8WUX9 453 aaPredicted RBP27.88■■■□□ 2.05
RANBP3-220ENST00000591092 GRIN2AQ12879 1464 aa27.85■■■□□ 2.05
RANBP3-220ENST00000591092 CEP162Q5TB80 1403 aa27.81■■■□□ 2.04
RANBP3-220ENST00000591092 RANGAP1P46060 587 aaPredicted RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms