RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 AEBP2Q6ZN18 517 aaPredicted RBP24.45■■□□□ 1.5
FOXN3-218ENST00000557718 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
FOXN3-218ENST00000557718 SENP3Q9H4L4 574 aaPredicted RBP20.82■□□□□ 0.92
FOXN3-218ENST00000557718 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
FOXN3-218ENST00000557718 FOXD1Q16676 465 aa19.4■□□□□ 0.7
FOXN3-218ENST00000557718 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
FOXN3-218ENST00000557718 PPP6R1Q9UPN7 881 aa18.24■□□□□ 0.51
FOXN3-218ENST00000557718 ADRA2BP18089 450 aa18.18■□□□□ 0.5
FOXN3-218ENST00000557718 PIAS4Q8N2W9 510 aaPredicted RBP18.15■□□□□ 0.5
FOXN3-218ENST00000557718 MSH5O43196 834 aa18.11■□□□□ 0.49
FOXN3-218ENST00000557718 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
FOXN3-218ENST00000557718 MAPK8IP2Q13387 824 aaPredicted RBP16.67■□□□□ 0.26
FOXN3-218ENST00000557718 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
FOXN3-218ENST00000557718 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
FOXN3-218ENST00000557718 PPP4R3CPQ6ZMV5 832 aa16.37■□□□□ 0.21
FOXN3-218ENST00000557718 CNKSR2Q8WXI2 1034 aa16.04■□□□□ 0.16
FOXN3-218ENST00000557718 HOXD11P31277 338 aaPredicted RBP15.97■□□□□ 0.15
FOXN3-218ENST00000557718 RNF216Q9NWF9 866 aaPredicted RBP15.87■□□□□ 0.13
FOXN3-218ENST00000557718 DCAF8L1A6NGE4 600 aa15.84■□□□□ 0.13
FOXN3-218ENST00000557718 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.12
FOXN3-218ENST00000557718 NPM3O75607 178 aaKnown RBP15.55■□□□□ 0.08
FOXN3-218ENST00000557718 CACNB1Q02641 598 aaPredicted RBP15.48■□□□□ 0.07
FOXN3-218ENST00000557718 RNF39Q9H2S5 420 aa15.48■□□□□ 0.07
FOXN3-218ENST00000557718 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
FOXN3-218ENST00000557718 KCNA4P22459 653 aa15.35■□□□□ 0.05
FOXN3-218ENST00000557718 C1QBPQ07021 282 aaKnown RBP15.25■□□□□ 0.03
FOXN3-218ENST00000557718 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.21■□□□□ 0.038e-18■□□□□ 9.2
FOXN3-218ENST00000557718 U3KPZ7 1027 aaPredicted RBP14.91□□□□□ -0.02
FOXN3-218ENST00000557718 SLC4A2P04920 1241 aa14.83□□□□□ -0.04
FOXN3-218ENST00000557718 SPINK5Q9NQ38 1064 aaPredicted RBP14.67□□□□□ -0.06
FOXN3-218ENST00000557718 CAPN15O75808 1086 aa14.63□□□□□ -0.07
FOXN3-218ENST00000557718 DSG3P32926 999 aa14.52□□□□□ -0.09
FOXN3-218ENST00000557718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
FOXN3-218ENST00000557718 HNRNPUL2Q1KMD3 747 aaKnown RBP14.51□□□□□ -0.09
FOXN3-218ENST00000557718 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
FOXN3-218ENST00000557718 APLP2Q06481 763 aa14.48□□□□□ -0.09
FOXN3-218ENST00000557718 SAMD1Q6SPF0 538 aaPredicted RBP14.43□□□□□ -0.1
FOXN3-218ENST00000557718 TRHP20396 242 aaPredicted RBP14.42□□□□□ -0.1
FOXN3-218ENST00000557718 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
FOXN3-218ENST00000557718 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
FOXN3-218ENST00000557718 ABCB7O75027 752 aa14.3□□□□□ -0.12
FOXN3-218ENST00000557718 FOXD4L1Q9NU39 408 aa14.28□□□□□ -0.12
FOXN3-218ENST00000557718 NISCHQ9Y2I1 1504 aa14.12□□□□□ -0.15
FOXN3-218ENST00000557718 ZBTB22O15209 634 aa14.12□□□□□ -0.15
FOXN3-218ENST00000557718 POLA2Q14181 598 aa14.06□□□□□ -0.16
FOXN3-218ENST00000557718 ATF5Q9Y2D1 282 aaPredicted RBP14.05□□□□□ -0.16
FOXN3-218ENST00000557718 RBM42Q9BTD8 480 aaKnown RBP13.84□□□□□ -0.19
FOXN3-218ENST00000557718 ATXN8OSP0DMR3 200 aa13.83□□□□□ -0.2
FOXN3-218ENST00000557718 ZBTB12Q9Y330 459 aaPredicted RBP13.77□□□□□ -0.21
FOXN3-218ENST00000557718 POTEHQ6S545 545 aa13.75□□□□□ -0.21
FOXN3-218ENST00000557718 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
FOXN3-218ENST00000557718 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
FOXN3-218ENST00000557718 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
FOXN3-218ENST00000557718 CHRDL2Q6WN34 429 aa13.51□□□□□ -0.25
FOXN3-218ENST00000557718 FBLN2P98095 1184 aa13.48□□□□□ -0.25
FOXN3-218ENST00000557718 REM2Q8IYK8 340 aaPredicted RBP13.43□□□□□ -0.26
FOXN3-218ENST00000557718 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
FOXN3-218ENST00000557718 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
FOXN3-218ENST00000557718 SPDYE2BA6NHP3 402 aa13.36□□□□□ -0.27
FOXN3-218ENST00000557718 SPDYE6P0CI01 402 aa13.36□□□□□ -0.27
FOXN3-218ENST00000557718 SPDYE2Q495Y8 402 aa13.36□□□□□ -0.27
FOXN3-218ENST00000557718 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
FOXN3-218ENST00000557718 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
FOXN3-218ENST00000557718 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
FOXN3-218ENST00000557718 SSUH2Q9Y2M2 353 aa13.2□□□□□ -0.3
FOXN3-218ENST00000557718 FXR2P51116 673 aaKnown RBP eCLIP13.15□□□□□ -0.3
FOXN3-218ENST00000557718 SPDYE1Q8NFV5 336 aaPredicted RBP13.1□□□□□ -0.31
FOXN3-218ENST00000557718 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
FOXN3-218ENST00000557718 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
FOXN3-218ENST00000557718 HAX1O00165 279 aa12.95□□□□□ -0.34
FOXN3-218ENST00000557718 PRKAR2AP13861 404 aaKnown RBP12.94□□□□□ -0.34
FOXN3-218ENST00000557718 SP7Q8TDD2 431 aaPredicted RBP12.93□□□□□ -0.34
FOXN3-218ENST00000557718 PRR29P0C7W0 189 aa12.88□□□□□ -0.35
FOXN3-218ENST00000557718 SPDYE4A6NLX3 237 aa12.82□□□□□ -0.36
FOXN3-218ENST00000557718 CHADLQ6NUI6 762 aa12.82□□□□□ -0.36
FOXN3-218ENST00000557718 EVX2Q03828 476 aa12.8□□□□□ -0.36
FOXN3-218ENST00000557718 C19orf67A6NJJ6 358 aa12.72□□□□□ -0.37
FOXN3-218ENST00000557718 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
FOXN3-218ENST00000557718 FARP1Q9Y4F1 1045 aaPredicted RBP12.64□□□□□ -0.39
FOXN3-218ENST00000557718 CREBZFQ9NS37 354 aa12.58□□□□□ -0.4
FOXN3-218ENST00000557718 CD44P16070 742 aaKnown RBP12.53□□□□□ -0.4
FOXN3-218ENST00000557718 PROM2Q8N271 834 aa12.53□□□□□ -0.4
FOXN3-218ENST00000557718 GABBR2O75899 941 aa12.52□□□□□ -0.41
FOXN3-218ENST00000557718 CCDC180Q9P1Z9 1646 aa12.51□□□□□ -0.41
FOXN3-218ENST00000557718 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
FOXN3-218ENST00000557718 ZRANB1Q9UGI0 708 aa12.38□□□□□ -0.43
FOXN3-218ENST00000557718 ZNF579Q8NAF0 562 aaKnown RBP12.35□□□□□ -0.43
FOXN3-218ENST00000557718 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
FOXN3-218ENST00000557718 CLCN6P51797 869 aa12.34□□□□□ -0.43
FOXN3-218ENST00000557718 PAK3O75914 559 aaPredicted RBP12.28□□□□□ -0.44
FOXN3-218ENST00000557718 FKBP8Q14318 412 aa12.28□□□□□ -0.44
FOXN3-218ENST00000557718 POTEIP0CG38 1075 aa12.26□□□□□ -0.45
FOXN3-218ENST00000557718 MIER1Q8N108 512 aa12.23□□□□□ -0.45
FOXN3-218ENST00000557718 PHF12Q96QT6 1004 aa12.21□□□□□ -0.45
FOXN3-218ENST00000557718 GALR2O43603 387 aaPredicted RBP12.2□□□□□ -0.46
FOXN3-218ENST00000557718 DCBLD2Q96PD2 775 aa12.19□□□□□ -0.46
FOXN3-218ENST00000557718 PLEKHG5O94827 1062 aa12.18□□□□□ -0.46
FOXN3-218ENST00000557718 LHX8Q68G74 356 aa12.13□□□□□ -0.47
FOXN3-218ENST00000557718 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
FOXN3-218ENST00000557718 TSPYL2Q9H2G4 693 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms