RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-208ENST00000587263 NISCHQ9Y2I1 1504 aa37.67■■■■□ 3.62
RANBP3-208ENST00000587263 ABCC9O60706 1549 aa34.63■■■■□ 3.13
RANBP3-208ENST00000587263 CCDC180Q9P1Z9 1646 aa34.1■■■■□ 3.05
RANBP3-208ENST00000587263 DNAJC5BQ9UF47 199 aa32.95■■■□□ 2.87
RANBP3-208ENST00000587263 RB1CC1Q8TDY2 1594 aa32.75■■■□□ 2.83
RANBP3-208ENST00000587263 NACADO15069 1562 aa32.38■■■□□ 2.77
RANBP3-208ENST00000587263 PABPN1Q86U42 306 aaKnown RBP eCLIP32.11■■■□□ 2.73
RANBP3-208ENST00000587263 DCAF8L2P0C7V8 631 aa32.01■■■□□ 2.71
RANBP3-208ENST00000587263 UNC13AQ9UPW8 1703 aa31.92■■■□□ 2.7
RANBP3-208ENST00000587263 BICRAQ9NZM4 1560 aa31.77■■■□□ 2.68
RANBP3-208ENST00000587263 MYO15BQ96JP2 1530 aa31.76■■■□□ 2.68
RANBP3-208ENST00000587263 SHROOM4Q9ULL8 1493 aa31.39■■■□□ 2.62
RANBP3-208ENST00000587263 CECR2Q9BXF3 1484 aa31.28■■■□□ 2.6
RANBP3-208ENST00000587263 CC2D2AQ9P2K1 1620 aa31.25■■■□□ 2.59
RANBP3-208ENST00000587263 DCAF1Q9Y4B6 1507 aa31.13■■■□□ 2.57
RANBP3-208ENST00000587263 ZCCHC6Q5VYS8 1495 aaKnown RBP31.12■■■□□ 2.57
RANBP3-208ENST00000587263 EIF4G1Q04637 1599 aaKnown RBP31.06■■■□□ 2.56
RANBP3-208ENST00000587263 SCRIBQ14160 1630 aa30.99■■■□□ 2.55
RANBP3-208ENST00000587263 DNAJC5Q9H3Z4 198 aa30.75■■■□□ 2.51
RANBP3-208ENST00000587263 CUX2O14529 1486 aa30.15■■■□□ 2.42
RANBP3-208ENST00000587263 ERCC6Q03468 1493 aa29.99■■■□□ 2.39
RANBP3-208ENST00000587263 NCAPD3P42695 1498 aa29.89■■■□□ 2.38
RANBP3-208ENST00000587263 ATAD2BQ9ULI0 1458 aa29.7■■■□□ 2.35
RANBP3-208ENST00000587263 HMGXB3Q12766 1538 aa29.63■■■□□ 2.33
RANBP3-208ENST00000587263 SMARCA2P51531 1590 aa29.62■■■□□ 2.33
RANBP3-208ENST00000587263 NESP48681 1621 aa29.56■■■□□ 2.32
RANBP3-208ENST00000587263 SMARCA4P51532 1647 aa29.53■■■□□ 2.32
RANBP3-208ENST00000587263 THOC2Q8NI27 1593 aaKnown RBP29.42■■■□□ 2.3
RANBP3-208ENST00000587263 BAZ1BQ9UIG0 1483 aaKnown RBP29.4■■■□□ 2.3
RANBP3-208ENST00000587263 LAMC3Q9Y6N6 1575 aa29.33■■■□□ 2.29
RANBP3-208ENST00000587263 BAZ1AQ9NRL2 1556 aaPredicted RBP29.32■■■□□ 2.28
RANBP3-208ENST00000587263 PEG3Q9GZU2 1588 aa29.26■■■□□ 2.28
RANBP3-208ENST00000587263 PDS5BQ9NTI5 1447 aa29.18■■■□□ 2.26
RANBP3-208ENST00000587263 KIF21AQ7Z4S6 1674 aa29.16■■■□□ 2.26
RANBP3-208ENST00000587263 TRIM41Q8WV44 630 aa29.14■■■□□ 2.26
RANBP3-208ENST00000587263 MROH2BQ7Z745 1585 aa29■■■□□ 2.23
RANBP3-208ENST00000587263 MRC2Q9UBG0 1479 aa28.96■■■□□ 2.23
RANBP3-208ENST00000587263 CADPSQ9ULU8 1353 aa28.94■■■□□ 2.22
RANBP3-208ENST00000587263 WDR62O43379 1518 aa28.89■■■□□ 2.22
RANBP3-208ENST00000587263 CEP164Q9UPV0 1460 aa28.72■■■□□ 2.19
RANBP3-208ENST00000587263 OSCARQ8IYS5 282 aa28.63■■■□□ 2.17
RANBP3-208ENST00000587263 FANCD2Q9BXW9 1451 aa28.62■■■□□ 2.17
RANBP3-208ENST00000587263 WIZO95785 1651 aa28.61■■■□□ 2.17
RANBP3-208ENST00000587263 CFTRP13569 1480 aa28.49■■■□□ 2.15
RANBP3-208ENST00000587263 URB2Q14146 1524 aaKnown RBP28.41■■■□□ 2.14
RANBP3-208ENST00000587263 RIMBP3CA6NJZ7 1639 aa28.32■■■□□ 2.12
RANBP3-208ENST00000587263 RIMBP3BA6NNM3 1639 aa28.32■■■□□ 2.12
RANBP3-208ENST00000587263 RIMBP3Q9UFD9 1639 aa28.32■■■□□ 2.12
RANBP3-208ENST00000587263 TOP2AP11388 1531 aaKnown RBP28.27■■■□□ 2.12
RANBP3-208ENST00000587263 RSF1Q96T23 1441 aaPredicted RBP28.19■■■□□ 2.1
RANBP3-208ENST00000587263 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
RANBP3-208ENST00000587263 IFT140Q96RY7 1462 aa28.18■■■□□ 2.1
RANBP3-208ENST00000587263 PRDM2Q13029 1718 aa28.14■■■□□ 2.1
RANBP3-208ENST00000587263 ZNF608Q9ULD9 1512 aaPredicted RBP28.13■■■□□ 2.09
RANBP3-208ENST00000587263 TOPBP1Q92547 1522 aa28.01■■■□□ 2.07
RANBP3-208ENST00000587263 EIF4G3O43432 1585 aaKnown RBP27.99■■■□□ 2.07
RANBP3-208ENST00000587263 CYB5RLQ6IPT4 315 aa27.98■■■□□ 2.07
RANBP3-208ENST00000587263 ABCC8Q09428 1581 aa27.95■■■□□ 2.07
RANBP3-208ENST00000587263 CCDC88BA6NC98 1476 aa27.91■■■□□ 2.06
RANBP3-208ENST00000587263 TRHP20396 242 aaPredicted RBP27.89■■■□□ 2.06
RANBP3-208ENST00000587263 DNMBPQ6XZF7 1577 aa27.86■■■□□ 2.05
RANBP3-208ENST00000587263 ARAP1Q96P48 1450 aa27.86■■■□□ 2.05
RANBP3-208ENST00000587263 CHD1O14646 1710 aa27.86■■■□□ 2.05
RANBP3-208ENST00000587263 AQRO60306 1485 aaKnown RBP eCLIP27.8■■■□□ 2.047e-10■■■■■ 31.1
RANBP3-208ENST00000587263 TARBP1Q13395 1621 aaKnown RBP27.79■■■□□ 2.04
RANBP3-208ENST00000587263 FBLN2P98095 1184 aa27.75■■■□□ 2.03
RANBP3-208ENST00000587263 POLA1P09884 1462 aaPredicted RBP27.69■■■□□ 2.02
RANBP3-208ENST00000587263 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
RANBP3-208ENST00000587263 CLASP1Q7Z460 1538 aa27.56■■■□□ 2
RANBP3-208ENST00000587263 TDRD9Q8NDG6 1382 aaKnown RBP27.55■■■□□ 2
RANBP3-208ENST00000587263 SOGA1O94964 1423 aa27.55■■■□□ 2
RANBP3-208ENST00000587263 WDR97A6NE52 1622 aa27.54■■■□□ 2
RANBP3-208ENST00000587263 SNAPC4Q5SXM2 1469 aa27.53■■■□□ 2
RANBP3-208ENST00000587263 AEBP2Q6ZN18 517 aaPredicted RBP27.53■■■□□ 2
RANBP3-208ENST00000587263 SYNJ1O43426 1573 aa27.52■■■□□ 2
RANBP3-208ENST00000587263 CHMP7Q8WUX9 453 aaPredicted RBP27.48■■□□□ 1.99
RANBP3-208ENST00000587263 MAGI1Q96QZ7 1491 aaPredicted RBP27.47■■□□□ 1.99
RANBP3-208ENST00000587263 FGD5Q6ZNL6 1462 aa27.43■■□□□ 1.98
RANBP3-208ENST00000587263 GRIN2BQ13224 1484 aa27.4■■□□□ 1.98
RANBP3-208ENST00000587263 SYNJ2O15056 1496 aa27.38■■□□□ 1.97
RANBP3-208ENST00000587263 GAPVD1Q14C86 1478 aa27.32■■□□□ 1.96
RANBP3-208ENST00000587263 CUX1P39880 1505 aa27.28■■□□□ 1.96
RANBP3-208ENST00000587263 PBRM1Q86U86 1689 aa27.21■■□□□ 1.95
RANBP3-208ENST00000587263 ABCA5Q8WWZ7 1642 aa27.1■■□□□ 1.93
RANBP3-208ENST00000587263 ABCA10Q8WWZ4 1543 aa27.1■■□□□ 1.93
RANBP3-208ENST00000587263 GRIN2AQ12879 1464 aa27.04■■□□□ 1.92
RANBP3-208ENST00000587263 ERCC6L2Q5T890 1561 aa27.04■■□□□ 1.92
RANBP3-208ENST00000587263 CEP170Q5SW79 1584 aa26.98■■□□□ 1.91
RANBP3-208ENST00000587263 NUP160Q12769 1436 aa26.97■■□□□ 1.91
RANBP3-208ENST00000587263 ADAMTS12P58397 1594 aa26.94■■□□□ 1.9
RANBP3-208ENST00000587263 SHROOM2Q13796 1616 aa26.91■■□□□ 1.9
RANBP3-208ENST00000587263 WRNQ14191 1432 aaPredicted RBP eCLIP26.88■■□□□ 1.895e-6■■■■■ 29.2
RANBP3-208ENST00000587263 FHAD1B1AJZ9 1412 aa26.86■■□□□ 1.89
RANBP3-208ENST00000587263 KIF13AQ9H1H9 1805 aa26.83■■□□□ 1.89
RANBP3-208ENST00000587263 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
RANBP3-208ENST00000587263 PRG4Q92954 1404 aaPredicted RBP26.75■■□□□ 1.87
RANBP3-208ENST00000587263 TOP2BQ02880 1626 aa26.72■■□□□ 1.87
RANBP3-208ENST00000587263 BIVM-ERCC5R4GMW8 1640 aa26.72■■□□□ 1.87
RANBP3-208ENST00000587263 ABCC10Q5T3U5 1492 aa26.68■■□□□ 1.86
RANBP3-208ENST00000587263 FAM69CQ0P6D2 419 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms