RNA–Protein interactions for RNA: ENST00000587956.5

RANBP3-213, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 512 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-213ENST00000587956 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
RANBP3-213ENST00000587956 CCDC180Q9P1Z9 1646 aa31.05■■■□□ 2.56
RANBP3-213ENST00000587956 ABCC9O60706 1549 aa30.83■■■□□ 2.53
RANBP3-213ENST00000587956 RB1CC1Q8TDY2 1594 aa29.41■■■□□ 2.3
RANBP3-213ENST00000587956 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
RANBP3-213ENST00000587956 NACADO15069 1562 aa29.23■■■□□ 2.27
RANBP3-213ENST00000587956 UNC13AQ9UPW8 1703 aa28.89■■■□□ 2.22
RANBP3-213ENST00000587956 MYO15BQ96JP2 1530 aa28.83■■■□□ 2.21
RANBP3-213ENST00000587956 ZCCHC6Q5VYS8 1495 aaKnown RBP28.81■■■□□ 2.2
RANBP3-213ENST00000587956 PABPN1Q86U42 306 aaKnown RBP eCLIP28.77■■■□□ 2.2
RANBP3-213ENST00000587956 DNAJC5BQ9UF47 199 aa28.63■■■□□ 2.17
RANBP3-213ENST00000587956 DCAF1Q9Y4B6 1507 aa28.59■■■□□ 2.17
RANBP3-213ENST00000587956 BICRAQ9NZM4 1560 aa28.55■■■□□ 2.16
RANBP3-213ENST00000587956 SCRIBQ14160 1630 aa28.41■■■□□ 2.14
RANBP3-213ENST00000587956 SHROOM4Q9ULL8 1493 aa28.05■■■□□ 2.08
RANBP3-213ENST00000587956 CC2D2AQ9P2K1 1620 aa27.85■■■□□ 2.05
RANBP3-213ENST00000587956 EIF4G1Q04637 1599 aaKnown RBP27.83■■■□□ 2.05
RANBP3-213ENST00000587956 CECR2Q9BXF3 1484 aa27.7■■■□□ 2.02
RANBP3-213ENST00000587956 SMARCA4P51532 1647 aa27.07■■□□□ 1.92
RANBP3-213ENST00000587956 NCAPD3P42695 1498 aa26.95■■□□□ 1.91
RANBP3-213ENST00000587956 ATAD2BQ9ULI0 1458 aa26.95■■□□□ 1.91
RANBP3-213ENST00000587956 BAZ1AQ9NRL2 1556 aaPredicted RBP26.92■■□□□ 1.9
RANBP3-213ENST00000587956 SMARCA2P51531 1590 aa26.91■■□□□ 1.9
RANBP3-213ENST00000587956 HMGXB3Q12766 1538 aa26.81■■□□□ 1.88
RANBP3-213ENST00000587956 MROH2BQ7Z745 1585 aa26.8■■□□□ 1.88
RANBP3-213ENST00000587956 BAZ1BQ9UIG0 1483 aaKnown RBP26.76■■□□□ 1.87
RANBP3-213ENST00000587956 PEG3Q9GZU2 1588 aa26.7■■□□□ 1.86
RANBP3-213ENST00000587956 ERCC6Q03468 1493 aa26.59■■□□□ 1.85
RANBP3-213ENST00000587956 NESP48681 1621 aa26.58■■□□□ 1.85
RANBP3-213ENST00000587956 WIZO95785 1651 aa26.56■■□□□ 1.84
RANBP3-213ENST00000587956 LAMC3Q9Y6N6 1575 aa26.36■■□□□ 1.81
RANBP3-213ENST00000587956 CUX2O14529 1486 aa26.35■■□□□ 1.81
RANBP3-213ENST00000587956 KIF21AQ7Z4S6 1674 aa26.31■■□□□ 1.8
RANBP3-213ENST00000587956 RSF1Q96T23 1441 aaPredicted RBP26.3■■□□□ 1.8
RANBP3-213ENST00000587956 THOC2Q8NI27 1593 aaKnown RBP26.21■■□□□ 1.79
RANBP3-213ENST00000587956 CADPSQ9ULU8 1353 aa26.18■■□□□ 1.78
RANBP3-213ENST00000587956 PDS5BQ9NTI5 1447 aa26.17■■□□□ 1.78
RANBP3-213ENST00000587956 TOP2AP11388 1531 aaKnown RBP26.15■■□□□ 1.78
RANBP3-213ENST00000587956 DNAJC5Q9H3Z4 198 aa26.01■■□□□ 1.75
RANBP3-213ENST00000587956 MRC2Q9UBG0 1479 aa25.97■■□□□ 1.75
RANBP3-213ENST00000587956 CFTRP13569 1480 aa25.93■■□□□ 1.74
RANBP3-213ENST00000587956 FANCD2Q9BXW9 1451 aa25.93■■□□□ 1.74
RANBP3-213ENST00000587956 CEP164Q9UPV0 1460 aa25.93■■□□□ 1.74
RANBP3-213ENST00000587956 WDR62O43379 1518 aa25.88■■□□□ 1.73
RANBP3-213ENST00000587956 CCDC88BA6NC98 1476 aa25.86■■□□□ 1.73
RANBP3-213ENST00000587956 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
RANBP3-213ENST00000587956 URB2Q14146 1524 aaKnown RBP25.71■■□□□ 1.71
RANBP3-213ENST00000587956 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
RANBP3-213ENST00000587956 TOPBP1Q92547 1522 aa25.47■■□□□ 1.67
RANBP3-213ENST00000587956 DNMBPQ6XZF7 1577 aa25.41■■□□□ 1.66
RANBP3-213ENST00000587956 ABCC8Q09428 1581 aa25.37■■□□□ 1.65
RANBP3-213ENST00000587956 IFT140Q96RY7 1462 aa25.37■■□□□ 1.65
RANBP3-213ENST00000587956 ZNF608Q9ULD9 1512 aaPredicted RBP25.36■■□□□ 1.65
RANBP3-213ENST00000587956 EIF4G3O43432 1585 aaKnown RBP25.26■■□□□ 1.63
RANBP3-213ENST00000587956 TARBP1Q13395 1621 aaKnown RBP25.23■■□□□ 1.63
RANBP3-213ENST00000587956 OSCARQ8IYS5 282 aa25.23■■□□□ 1.63
RANBP3-213ENST00000587956 POLA1P09884 1462 aaPredicted RBP25.22■■□□□ 1.63
RANBP3-213ENST00000587956 RAD54L2Q9Y4B4 1467 aa25.18■■□□□ 1.62
RANBP3-213ENST00000587956 AQRO60306 1485 aaKnown RBP eCLIP25.17■■□□□ 1.622e-9■■■■■ 52.5
RANBP3-213ENST00000587956 CUX1P39880 1505 aa25.16■■□□□ 1.62
RANBP3-213ENST00000587956 TRIM41Q8WV44 630 aa25.15■■□□□ 1.62
RANBP3-213ENST00000587956 FGD5Q6ZNL6 1462 aa25.14■■□□□ 1.61
RANBP3-213ENST00000587956 SOGA1O94964 1423 aa25.12■■□□□ 1.61
RANBP3-213ENST00000587956 CHD1O14646 1710 aa25.09■■□□□ 1.61
RANBP3-213ENST00000587956 TDRD9Q8NDG6 1382 aaKnown RBP25.06■■□□□ 1.6
RANBP3-213ENST00000587956 FBLN2P98095 1184 aa25.01■■□□□ 1.59
RANBP3-213ENST00000587956 WDR97A6NE52 1622 aa24.97■■□□□ 1.59
RANBP3-213ENST00000587956 RIMBP3CA6NJZ7 1639 aa24.95■■□□□ 1.58
RANBP3-213ENST00000587956 RIMBP3BA6NNM3 1639 aa24.95■■□□□ 1.58
RANBP3-213ENST00000587956 RIMBP3Q9UFD9 1639 aa24.95■■□□□ 1.58
RANBP3-213ENST00000587956 SNAPC4Q5SXM2 1469 aa24.92■■□□□ 1.58
RANBP3-213ENST00000587956 PBRM1Q86U86 1689 aa24.9■■□□□ 1.58
RANBP3-213ENST00000587956 GRIN2BQ13224 1484 aa24.85■■□□□ 1.57
RANBP3-213ENST00000587956 ARHGEF11O15085 1522 aa24.85■■□□□ 1.57
RANBP3-213ENST00000587956 SYNJ1O43426 1573 aa24.84■■□□□ 1.57
RANBP3-213ENST00000587956 BIVM-ERCC5R4GMW8 1640 aa24.84■■□□□ 1.57
RANBP3-213ENST00000587956 WRNQ14191 1432 aaPredicted RBP eCLIP24.83■■□□□ 1.575e-6■■■■■ 29.2
RANBP3-213ENST00000587956 GAPVD1Q14C86 1478 aa24.83■■□□□ 1.56
RANBP3-213ENST00000587956 TOP2BQ02880 1626 aa24.83■■□□□ 1.56
RANBP3-213ENST00000587956 CHMP7Q8WUX9 453 aaPredicted RBP24.81■■□□□ 1.56
RANBP3-213ENST00000587956 ABCA10Q8WWZ4 1543 aa24.81■■□□□ 1.56
RANBP3-213ENST00000587956 MAGI1Q96QZ7 1491 aaPredicted RBP24.8■■□□□ 1.56
RANBP3-213ENST00000587956 ABCA5Q8WWZ7 1642 aa24.79■■□□□ 1.56
RANBP3-213ENST00000587956 SYNJ2O15056 1496 aa24.73■■□□□ 1.55
RANBP3-213ENST00000587956 CYB5RLQ6IPT4 315 aa24.68■■□□□ 1.54
RANBP3-213ENST00000587956 CLASP1Q7Z460 1538 aa24.67■■□□□ 1.54
RANBP3-213ENST00000587956 ARAP1Q96P48 1450 aa24.63■■□□□ 1.53
RANBP3-213ENST00000587956 ADAMTS12P58397 1594 aa24.6■■□□□ 1.53
RANBP3-213ENST00000587956 GRIN2AQ12879 1464 aa24.54■■□□□ 1.52
RANBP3-213ENST00000587956 ERICH3Q5RHP9 1530 aa24.51■■□□□ 1.51
RANBP3-213ENST00000587956 FHAD1B1AJZ9 1412 aa24.49■■□□□ 1.51
RANBP3-213ENST00000587956 CEP170Q5SW79 1584 aa24.49■■□□□ 1.51
RANBP3-213ENST00000587956 NUP160Q12769 1436 aa24.41■■□□□ 1.5
RANBP3-213ENST00000587956 ERCC6L2Q5T890 1561 aa24.4■■□□□ 1.5
RANBP3-213ENST00000587956 TRHP20396 242 aaPredicted RBP24.37■■□□□ 1.49
RANBP3-213ENST00000587956 KIF27Q86VH2 1401 aa24.32■■□□□ 1.48
RANBP3-213ENST00000587956 SHROOM2Q13796 1616 aa24.32■■□□□ 1.48
RANBP3-213ENST00000587956 CUL7Q14999 1698 aa24.26■■□□□ 1.47
RANBP3-213ENST00000587956 IGF1RP08069 1367 aa24.26■■□□□ 1.47
RANBP3-213ENST00000587956 RUSC2Q8N2Y8 1516 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms