RNA–Protein interactions for RNA: ENST00000590623.5

RANBP3-218, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 786 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-218ENST00000590623 NISCHQ9Y2I1 1504 aa18.83■□□□□ 0.6
RANBP3-218ENST00000590623 CCDC180Q9P1Z9 1646 aa16.49■□□□□ 0.23
RANBP3-218ENST00000590623 ABCC9O60706 1549 aa15.79■□□□□ 0.12
RANBP3-218ENST00000590623 ZCCHC6Q5VYS8 1495 aaKnown RBP15.79■□□□□ 0.12
RANBP3-218ENST00000590623 DCAF8L2P0C7V8 631 aa15.58■□□□□ 0.08
RANBP3-218ENST00000590623 DCAF1Q9Y4B6 1507 aa15.51■□□□□ 0.07
RANBP3-218ENST00000590623 NACADO15069 1562 aa15.36■□□□□ 0.05
RANBP3-218ENST00000590623 MYO15BQ96JP2 1530 aa15.36■□□□□ 0.05
RANBP3-218ENST00000590623 SHROOM4Q9ULL8 1493 aa15.32■□□□□ 0.04
RANBP3-218ENST00000590623 RB1CC1Q8TDY2 1594 aa15.28■□□□□ 0.04
RANBP3-218ENST00000590623 SCRIBQ14160 1630 aa15.21■□□□□ 0.03
RANBP3-218ENST00000590623 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
RANBP3-218ENST00000590623 BICRAQ9NZM4 1560 aa14.91□□□□□ -0.02
RANBP3-218ENST00000590623 PABPN1Q86U42 306 aaKnown RBP eCLIP14.85□□□□□ -0.037e-7■□□□□ 8.1
RANBP3-218ENST00000590623 CECR2Q9BXF3 1484 aa14.7□□□□□ -0.06
RANBP3-218ENST00000590623 SUPT5HO00267 1087 aaKnown RBP14.6□□□□□ -0.07
RANBP3-218ENST00000590623 MROH2BQ7Z745 1585 aa14.59□□□□□ -0.07
RANBP3-218ENST00000590623 RSF1Q96T23 1441 aaPredicted RBP14.55□□□□□ -0.08
RANBP3-218ENST00000590623 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
RANBP3-218ENST00000590623 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
RANBP3-218ENST00000590623 WIZO95785 1651 aa14.49□□□□□ -0.09
RANBP3-218ENST00000590623 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
RANBP3-218ENST00000590623 PEG3Q9GZU2 1588 aa14.32□□□□□ -0.12
RANBP3-218ENST00000590623 ATAD2BQ9ULI0 1458 aa14.31□□□□□ -0.12
RANBP3-218ENST00000590623 CC2D2AQ9P2K1 1620 aa14.28□□□□□ -0.12
RANBP3-218ENST00000590623 TOP2AP11388 1531 aaKnown RBP14.27□□□□□ -0.12
RANBP3-218ENST00000590623 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
RANBP3-218ENST00000590623 BAZ1BQ9UIG0 1483 aaKnown RBP14.2□□□□□ -0.14
RANBP3-218ENST00000590623 NCAPD3P42695 1498 aa14.18□□□□□ -0.14
RANBP3-218ENST00000590623 HMGXB3Q12766 1538 aa14.15□□□□□ -0.14
RANBP3-218ENST00000590623 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
RANBP3-218ENST00000590623 DNAJC5BQ9UF47 199 aa14.1□□□□□ -0.15
RANBP3-218ENST00000590623 CHIC1Q5VXU3 224 aa13.89□□□□□ -0.19
RANBP3-218ENST00000590623 NESP48681 1621 aa13.84□□□□□ -0.19
RANBP3-218ENST00000590623 PRDM2Q13029 1718 aa13.84□□□□□ -0.19
RANBP3-218ENST00000590623 ABCC8Q09428 1581 aa13.83□□□□□ -0.19
RANBP3-218ENST00000590623 CFTRP13569 1480 aa13.82□□□□□ -0.2
RANBP3-218ENST00000590623 CADPSQ9ULU8 1353 aa13.8□□□□□ -0.2
RANBP3-218ENST00000590623 LAMC3Q9Y6N6 1575 aa13.73□□□□□ -0.21
RANBP3-218ENST00000590623 SYNJ1O43426 1573 aa13.7□□□□□ -0.22
RANBP3-218ENST00000590623 KIF21AQ7Z4S6 1674 aa13.69□□□□□ -0.22
RANBP3-218ENST00000590623 FANCD2Q9BXW9 1451 aa13.68□□□□□ -0.22
RANBP3-218ENST00000590623 WRNQ14191 1432 aaPredicted RBP eCLIP13.67□□□□□ -0.225e-6■■■■■ 29.2
RANBP3-218ENST00000590623 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
RANBP3-218ENST00000590623 CUX1P39880 1505 aa13.65□□□□□ -0.22
RANBP3-218ENST00000590623 BIVM-ERCC5R4GMW8 1640 aa13.62□□□□□ -0.23
RANBP3-218ENST00000590623 TOP2BQ02880 1626 aa13.61□□□□□ -0.23
RANBP3-218ENST00000590623 CEP164Q9UPV0 1460 aa13.6□□□□□ -0.23
RANBP3-218ENST00000590623 PDS5BQ9NTI5 1447 aa13.58□□□□□ -0.24
RANBP3-218ENST00000590623 URB2Q14146 1524 aaKnown RBP13.56□□□□□ -0.24
RANBP3-218ENST00000590623 TOPBP1Q92547 1522 aa13.54□□□□□ -0.24
RANBP3-218ENST00000590623 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
RANBP3-218ENST00000590623 RUSC2Q8N2Y8 1516 aa13.51□□□□□ -0.25
RANBP3-218ENST00000590623 FAM9AQ8IZU1 332 aaPredicted RBP13.51□□□□□ -0.25
RANBP3-218ENST00000590623 FGD5Q6ZNL6 1462 aa13.5□□□□□ -0.25
RANBP3-218ENST00000590623 SOGA1O94964 1423 aa13.5□□□□□ -0.25
RANBP3-218ENST00000590623 ERCC6Q03468 1493 aa13.48□□□□□ -0.25
RANBP3-218ENST00000590623 MRC2Q9UBG0 1479 aa13.48□□□□□ -0.25
RANBP3-218ENST00000590623 THOC2Q8NI27 1593 aaKnown RBP13.48□□□□□ -0.25
RANBP3-218ENST00000590623 POLA1P09884 1462 aaPredicted RBP13.45□□□□□ -0.26
RANBP3-218ENST00000590623 RAD54L2Q9Y4B4 1467 aa13.44□□□□□ -0.26
RANBP3-218ENST00000590623 WDR62O43379 1518 aa13.43□□□□□ -0.26
RANBP3-218ENST00000590623 WDR97A6NE52 1622 aa13.4□□□□□ -0.26
RANBP3-218ENST00000590623 LOC105371045A0A1W2PR82 267 aa13.39□□□□□ -0.27
RANBP3-218ENST00000590623 CUX2O14529 1486 aa13.37□□□□□ -0.27
RANBP3-218ENST00000590623 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
RANBP3-218ENST00000590623 TARBP1Q13395 1621 aaKnown RBP13.36□□□□□ -0.27
RANBP3-218ENST00000590623 ABCA10Q8WWZ4 1543 aa13.34□□□□□ -0.27
RANBP3-218ENST00000590623 EEA1Q15075 1411 aa13.32□□□□□ -0.28
RANBP3-218ENST00000590623 KIF27Q86VH2 1401 aa13.31□□□□□ -0.28
RANBP3-218ENST00000590623 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
RANBP3-218ENST00000590623 ABCA5Q8WWZ7 1642 aa13.29□□□□□ -0.28
RANBP3-218ENST00000590623 TDRD9Q8NDG6 1382 aaKnown RBP13.29□□□□□ -0.28
RANBP3-218ENST00000590623 ZNF608Q9ULD9 1512 aaPredicted RBP13.28□□□□□ -0.28
RANBP3-218ENST00000590623 IFT140Q96RY7 1462 aa13.27□□□□□ -0.29
RANBP3-218ENST00000590623 PBRM1Q86U86 1689 aa13.25□□□□□ -0.29
RANBP3-218ENST00000590623 KIF21BO75037 1637 aa13.25□□□□□ -0.29
RANBP3-218ENST00000590623 AQRO60306 1485 aaKnown RBP eCLIP13.24□□□□□ -0.296e-8■■■■■ 27.5
RANBP3-218ENST00000590623 IGF1RP08069 1367 aa13.24□□□□□ -0.29
RANBP3-218ENST00000590623 GAPVD1Q14C86 1478 aa13.23□□□□□ -0.29
RANBP3-218ENST00000590623 RAPGEF2Q9Y4G8 1499 aa13.23□□□□□ -0.29
RANBP3-218ENST00000590623 EIF4G3O43432 1585 aaKnown RBP13.22□□□□□ -0.29
RANBP3-218ENST00000590623 PRXQ9BXM0 1461 aa13.22□□□□□ -0.29
RANBP3-218ENST00000590623 GOLGA3Q08378 1498 aa13.19□□□□□ -0.3
RANBP3-218ENST00000590623 ERICH3Q5RHP9 1530 aa13.17□□□□□ -0.3
RANBP3-218ENST00000590623 CARMIL1Q5VZK9 1371 aa13.17□□□□□ -0.3
RANBP3-218ENST00000590623 CUL7Q14999 1698 aa13.16□□□□□ -0.3
RANBP3-218ENST00000590623 GRIN2BQ13224 1484 aa13.14□□□□□ -0.31
RANBP3-218ENST00000590623 ADAMTS12P58397 1594 aa13.14□□□□□ -0.31
RANBP3-218ENST00000590623 SNAPC4Q5SXM2 1469 aa13.12□□□□□ -0.31
RANBP3-218ENST00000590623 UBTFP17480 764 aaKnown RBP13.12□□□□□ -0.31
RANBP3-218ENST00000590623 TNIKQ9UKE5 1360 aa13.11□□□□□ -0.31
RANBP3-218ENST00000590623 AEBP2Q6ZN18 517 aaPredicted RBP13.09□□□□□ -0.31
RANBP3-218ENST00000590623 FHAD1B1AJZ9 1412 aa13.06□□□□□ -0.32
RANBP3-218ENST00000590623 CEP162Q5TB80 1403 aa13.06□□□□□ -0.32
RANBP3-218ENST00000590623 CTTNBP2Q8WZ74 1663 aa13.05□□□□□ -0.32
RANBP3-218ENST00000590623 RANGAP1P46060 587 aaPredicted RBP13.04□□□□□ -0.32
RANBP3-218ENST00000590623 MAGI1Q96QZ7 1491 aaPredicted RBP13.04□□□□□ -0.32
RANBP3-218ENST00000590623 CHD1O14646 1710 aa13.02□□□□□ -0.33
RANBP3-218ENST00000590623 GRIN2AQ12879 1464 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms