RNA–Protein interactions for RNA: ENST00000389462.8

PTMS-202, Transcript of parathymosin, humanhuman

TSL 2 BASIC

Gene PTMS, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-202ENST00000389462 NISCHQ9Y2I1 1504 aa40.67■■■■■ 4.1
PTMS-202ENST00000389462 ABCC9O60706 1549 aa37.24■■■■□ 3.55
PTMS-202ENST00000389462 CCDC180Q9P1Z9 1646 aa36.7■■■■□ 3.47
PTMS-202ENST00000389462 DNAJC5BQ9UF47 199 aa35.33■■■■□ 3.25
PTMS-202ENST00000389462 RB1CC1Q8TDY2 1594 aa35.21■■■■□ 3.23
PTMS-202ENST00000389462 NACADO15069 1562 aa34.83■■■■□ 3.17
PTMS-202ENST00000389462 DCAF8L2P0C7V8 631 aa34.65■■■■□ 3.14
PTMS-202ENST00000389462 PABPN1Q86U42 306 aaKnown RBP eCLIP34.6■■■■□ 3.13
PTMS-202ENST00000389462 UNC13AQ9UPW8 1703 aa34.36■■■■□ 3.09
PTMS-202ENST00000389462 BICRAQ9NZM4 1560 aa34.16■■■■□ 3.06
PTMS-202ENST00000389462 MYO15BQ96JP2 1530 aa34.15■■■■□ 3.06
PTMS-202ENST00000389462 SHROOM4Q9ULL8 1493 aa33.66■■■□□ 2.98
PTMS-202ENST00000389462 ZCCHC6Q5VYS8 1495 aaKnown RBP33.59■■■□□ 2.97
PTMS-202ENST00000389462 CECR2Q9BXF3 1484 aa33.58■■■□□ 2.97
PTMS-202ENST00000389462 CC2D2AQ9P2K1 1620 aa33.58■■■□□ 2.97
PTMS-202ENST00000389462 DCAF1Q9Y4B6 1507 aa33.54■■■□□ 2.96
PTMS-202ENST00000389462 SCRIBQ14160 1630 aa33.46■■■□□ 2.95
PTMS-202ENST00000389462 EIF4G1Q04637 1599 aaKnown RBP33.39■■■□□ 2.94
PTMS-202ENST00000389462 DNAJC5Q9H3Z4 198 aa32.81■■■□□ 2.84
PTMS-202ENST00000389462 CUX2O14529 1486 aa32.28■■■□□ 2.76
PTMS-202ENST00000389462 ERCC6Q03468 1493 aa32.21■■■□□ 2.75
PTMS-202ENST00000389462 NCAPD3P42695 1498 aa32.15■■■□□ 2.74
PTMS-202ENST00000389462 ATAD2BQ9ULI0 1458 aa31.99■■■□□ 2.71
PTMS-202ENST00000389462 SMARCA2P51531 1590 aa31.88■■■□□ 2.69
PTMS-202ENST00000389462 HMGXB3Q12766 1538 aa31.87■■■□□ 2.69
PTMS-202ENST00000389462 SMARCA4P51532 1647 aa31.84■■■□□ 2.69
PTMS-202ENST00000389462 NESP48681 1621 aa31.83■■■□□ 2.69
PTMS-202ENST00000389462 BAZ1BQ9UIG0 1483 aaKnown RBP31.69■■■□□ 2.66
PTMS-202ENST00000389462 BAZ1AQ9NRL2 1556 aaPredicted RBP31.62■■■□□ 2.65
PTMS-202ENST00000389462 THOC2Q8NI27 1593 aaKnown RBP31.59■■■□□ 2.65
PTMS-202ENST00000389462 LAMC3Q9Y6N6 1575 aa31.51■■■□□ 2.64
PTMS-202ENST00000389462 PEG3Q9GZU2 1588 aa31.5■■■□□ 2.63
PTMS-202ENST00000389462 KIF21AQ7Z4S6 1674 aa31.38■■■□□ 2.61
PTMS-202ENST00000389462 PDS5BQ9NTI5 1447 aa31.38■■■□□ 2.61
PTMS-202ENST00000389462 MROH2BQ7Z745 1585 aa31.34■■■□□ 2.61
PTMS-202ENST00000389462 TRIM41Q8WV44 630 aa31.24■■■□□ 2.59
PTMS-202ENST00000389462 CADPSQ9ULU8 1353 aa31.17■■■□□ 2.58
PTMS-202ENST00000389462 MRC2Q9UBG0 1479 aa31.13■■■□□ 2.57
PTMS-202ENST00000389462 WDR62O43379 1518 aa31.04■■■□□ 2.56
PTMS-202ENST00000389462 WIZO95785 1651 aa30.95■■■□□ 2.55
PTMS-202ENST00000389462 CEP164Q9UPV0 1460 aa30.91■■■□□ 2.54
PTMS-202ENST00000389462 FANCD2Q9BXW9 1451 aa30.83■■■□□ 2.53
PTMS-202ENST00000389462 OSCARQ8IYS5 282 aa30.74■■■□□ 2.51
PTMS-202ENST00000389462 CFTRP13569 1480 aa30.7■■■□□ 2.5
PTMS-202ENST00000389462 URB2Q14146 1524 aaKnown RBP30.59■■■□□ 2.49
PTMS-202ENST00000389462 TOP2AP11388 1531 aaKnown RBP30.52■■■□□ 2.48
PTMS-202ENST00000389462 RSF1Q96T23 1441 aaPredicted RBP30.51■■■□□ 2.47
PTMS-202ENST00000389462 RIMBP3CA6NJZ7 1639 aa30.37■■■□□ 2.45
PTMS-202ENST00000389462 RIMBP3BA6NNM3 1639 aa30.37■■■□□ 2.45
PTMS-202ENST00000389462 RIMBP3Q9UFD9 1639 aa30.37■■■□□ 2.45
PTMS-202ENST00000389462 PRDM2Q13029 1718 aa30.33■■■□□ 2.45
PTMS-202ENST00000389462 ZNF608Q9ULD9 1512 aaPredicted RBP30.31■■■□□ 2.44
PTMS-202ENST00000389462 IFT140Q96RY7 1462 aa30.31■■■□□ 2.44
PTMS-202ENST00000389462 ARHGEF11O15085 1522 aa30.23■■■□□ 2.43
PTMS-202ENST00000389462 CCDC88BA6NC98 1476 aa30.19■■■□□ 2.42
PTMS-202ENST00000389462 TOPBP1Q92547 1522 aa30.18■■■□□ 2.42
PTMS-202ENST00000389462 EIF4G3O43432 1585 aaKnown RBP30.11■■■□□ 2.41
PTMS-202ENST00000389462 ABCC8Q09428 1581 aa30.08■■■□□ 2.41
PTMS-202ENST00000389462 CYB5RLQ6IPT4 315 aa30.07■■■□□ 2.4
PTMS-202ENST00000389462 DNMBPQ6XZF7 1577 aa30.03■■■□□ 2.4
PTMS-202ENST00000389462 AQRO60306 1485 aaKnown RBP eCLIP29.99■■■□□ 2.391e-7■■■□□ 18.9
PTMS-202ENST00000389462 CHD1O14646 1710 aa29.97■■■□□ 2.39
PTMS-202ENST00000389462 TRHP20396 242 aaPredicted RBP29.94■■■□□ 2.38
PTMS-202ENST00000389462 FBLN2P98095 1184 aa29.94■■■□□ 2.38
PTMS-202ENST00000389462 TARBP1Q13395 1621 aaKnown RBP29.93■■■□□ 2.38
PTMS-202ENST00000389462 ARAP1Q96P48 1450 aa29.9■■■□□ 2.38
PTMS-202ENST00000389462 POLA1P09884 1462 aaPredicted RBP29.84■■■□□ 2.37
PTMS-202ENST00000389462 RAD54L2Q9Y4B4 1467 aa29.75■■■□□ 2.35
PTMS-202ENST00000389462 TDRD9Q8NDG6 1382 aaKnown RBP29.73■■■□□ 2.35
PTMS-202ENST00000389462 SOGA1O94964 1423 aa29.71■■■□□ 2.35
PTMS-202ENST00000389462 SNAPC4Q5SXM2 1469 aa29.67■■■□□ 2.34
PTMS-202ENST00000389462 SUPT5HO00267 1087 aaKnown RBP29.64■■■□□ 2.34
PTMS-202ENST00000389462 CHMP7Q8WUX9 453 aaPredicted RBP29.61■■■□□ 2.33
PTMS-202ENST00000389462 CLASP1Q7Z460 1538 aa29.61■■■□□ 2.33
PTMS-202ENST00000389462 FGD5Q6ZNL6 1462 aa29.6■■■□□ 2.33
PTMS-202ENST00000389462 WDR97A6NE52 1622 aa29.59■■■□□ 2.33
PTMS-202ENST00000389462 SYNJ1O43426 1573 aa29.57■■■□□ 2.32
PTMS-202ENST00000389462 MAGI1Q96QZ7 1491 aaPredicted RBP29.55■■■□□ 2.32
PTMS-202ENST00000389462 GRIN2BQ13224 1484 aa29.51■■■□□ 2.31
PTMS-202ENST00000389462 CUX1P39880 1505 aa29.47■■■□□ 2.31
PTMS-202ENST00000389462 SYNJ2O15056 1496 aa29.47■■■□□ 2.31
PTMS-202ENST00000389462 AEBP2Q6ZN18 517 aaPredicted RBP29.44■■■□□ 2.3
PTMS-202ENST00000389462 GAPVD1Q14C86 1478 aa29.36■■■□□ 2.29
PTMS-202ENST00000389462 PBRM1Q86U86 1689 aa29.34■■■□□ 2.29
PTMS-202ENST00000389462 ABCA10Q8WWZ4 1543 aa29.21■■■□□ 2.27
PTMS-202ENST00000389462 ABCA5Q8WWZ7 1642 aa29.21■■■□□ 2.27
PTMS-202ENST00000389462 ERCC6L2Q5T890 1561 aa29.13■■■□□ 2.25
PTMS-202ENST00000389462 GRIN2AQ12879 1464 aa29.12■■■□□ 2.25
PTMS-202ENST00000389462 CEP170Q5SW79 1584 aa29.05■■■□□ 2.24
PTMS-202ENST00000389462 ADAMTS12P58397 1594 aa29.04■■■□□ 2.24
PTMS-202ENST00000389462 NUP160Q12769 1436 aa29.03■■■□□ 2.24
PTMS-202ENST00000389462 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.247e-8■■■■■ 32.7
PTMS-202ENST00000389462 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
PTMS-202ENST00000389462 SHROOM2Q13796 1616 aa28.94■■■□□ 2.22
PTMS-202ENST00000389462 TOP2BQ02880 1626 aa28.87■■■□□ 2.21
PTMS-202ENST00000389462 BIVM-ERCC5R4GMW8 1640 aa28.87■■■□□ 2.21
PTMS-202ENST00000389462 ERICH3Q5RHP9 1530 aa28.84■■■□□ 2.21
PTMS-202ENST00000389462 PRG4Q92954 1404 aaPredicted RBP28.83■■■□□ 2.21
PTMS-202ENST00000389462 KIF13AQ9H1H9 1805 aa28.83■■■□□ 2.21
PTMS-202ENST00000389462 JPH4Q96JJ6 628 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms