RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 NISCHQ9Y2I1 1504 aa35.67■■■■□ 3.3
SHANK2-209ENST00000445654 ABCC9O60706 1549 aa32.82■■■□□ 2.84
SHANK2-209ENST00000445654 CCDC180Q9P1Z9 1646 aa32.38■■■□□ 2.77
SHANK2-209ENST00000445654 DNAJC5BQ9UF47 199 aa31.22■■■□□ 2.59
SHANK2-209ENST00000445654 RB1CC1Q8TDY2 1594 aa31.12■■■□□ 2.57
SHANK2-209ENST00000445654 NACADO15069 1562 aa30.75■■■□□ 2.51
SHANK2-209ENST00000445654 PABPN1Q86U42 306 aaKnown RBP eCLIP30.4■■■□□ 2.46
SHANK2-209ENST00000445654 DCAF8L2P0C7V8 631 aa30.31■■■□□ 2.44
SHANK2-209ENST00000445654 UNC13AQ9UPW8 1703 aa30.27■■■□□ 2.44
SHANK2-209ENST00000445654 MYO15BQ96JP2 1530 aa30.17■■■□□ 2.42
SHANK2-209ENST00000445654 BICRAQ9NZM4 1560 aa30.09■■■□□ 2.41
SHANK2-209ENST00000445654 SHROOM4Q9ULL8 1493 aa29.86■■■□□ 2.37
SHANK2-209ENST00000445654 CECR2Q9BXF3 1484 aa29.68■■■□□ 2.34
SHANK2-209ENST00000445654 CC2D2AQ9P2K1 1620 aa29.65■■■□□ 2.34
SHANK2-209ENST00000445654 DCAF1Q9Y4B6 1507 aa29.53■■■□□ 2.32
SHANK2-209ENST00000445654 EIF4G1Q04637 1599 aaKnown RBP29.46■■■□□ 2.31
SHANK2-209ENST00000445654 ZCCHC6Q5VYS8 1495 aaKnown RBP29.43■■■□□ 2.3
SHANK2-209ENST00000445654 SCRIBQ14160 1630 aa29.32■■■□□ 2.28
SHANK2-209ENST00000445654 DNAJC5Q9H3Z4 198 aa29.29■■■□□ 2.28
SHANK2-209ENST00000445654 CUX2O14529 1486 aa28.68■■■□□ 2.18
SHANK2-209ENST00000445654 ERCC6Q03468 1493 aa28.48■■■□□ 2.15
SHANK2-209ENST00000445654 NCAPD3P42695 1498 aa28.35■■■□□ 2.13
SHANK2-209ENST00000445654 ATAD2BQ9ULI0 1458 aa28.13■■■□□ 2.09
SHANK2-209ENST00000445654 SMARCA2P51531 1590 aa28.12■■■□□ 2.09
SHANK2-209ENST00000445654 HMGXB3Q12766 1538 aa28.12■■■□□ 2.09
SHANK2-209ENST00000445654 NESP48681 1621 aa27.96■■■□□ 2.07
SHANK2-209ENST00000445654 SMARCA4P51532 1647 aa27.96■■■□□ 2.07
SHANK2-209ENST00000445654 THOC2Q8NI27 1593 aaKnown RBP27.9■■■□□ 2.06
SHANK2-209ENST00000445654 BAZ1BQ9UIG0 1483 aaKnown RBP27.87■■■□□ 2.05
SHANK2-209ENST00000445654 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
SHANK2-209ENST00000445654 BAZ1AQ9NRL2 1556 aaPredicted RBP27.8■■■□□ 2.04
SHANK2-209ENST00000445654 PEG3Q9GZU2 1588 aa27.74■■■□□ 2.03
SHANK2-209ENST00000445654 PDS5BQ9NTI5 1447 aa27.73■■■□□ 2.03
SHANK2-209ENST00000445654 TRIM41Q8WV44 630 aa27.69■■■□□ 2.02
SHANK2-209ENST00000445654 KIF21AQ7Z4S6 1674 aa27.66■■■□□ 2.02
SHANK2-209ENST00000445654 MRC2Q9UBG0 1479 aa27.47■■□□□ 1.99
SHANK2-209ENST00000445654 CADPSQ9ULU8 1353 aa27.45■■□□□ 1.98
SHANK2-209ENST00000445654 MROH2BQ7Z745 1585 aa27.41■■□□□ 1.98
SHANK2-209ENST00000445654 WDR62O43379 1518 aa27.41■■□□□ 1.98
SHANK2-209ENST00000445654 CEP164Q9UPV0 1460 aa27.25■■□□□ 1.95
SHANK2-209ENST00000445654 OSCARQ8IYS5 282 aa27.24■■□□□ 1.95
SHANK2-209ENST00000445654 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
SHANK2-209ENST00000445654 WIZO95785 1651 aa27.05■■□□□ 1.92
SHANK2-209ENST00000445654 CFTRP13569 1480 aa27■■□□□ 1.91
SHANK2-209ENST00000445654 RIMBP3CA6NJZ7 1639 aa26.9■■□□□ 1.9
SHANK2-209ENST00000445654 RIMBP3BA6NNM3 1639 aa26.9■■□□□ 1.9
SHANK2-209ENST00000445654 RIMBP3Q9UFD9 1639 aa26.9■■□□□ 1.9
SHANK2-209ENST00000445654 URB2Q14146 1524 aaKnown RBP26.9■■□□□ 1.9
SHANK2-209ENST00000445654 ARHGEF11O15085 1522 aa26.75■■□□□ 1.87
SHANK2-209ENST00000445654 TOP2AP11388 1531 aaKnown RBP26.75■■□□□ 1.87
SHANK2-209ENST00000445654 IFT140Q96RY7 1462 aa26.74■■□□□ 1.87
SHANK2-209ENST00000445654 PRDM2Q13029 1718 aa26.73■■□□□ 1.87
SHANK2-209ENST00000445654 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
SHANK2-209ENST00000445654 ZNF608Q9ULD9 1512 aaPredicted RBP26.62■■□□□ 1.85
SHANK2-209ENST00000445654 ABCC8Q09428 1581 aa26.58■■□□□ 1.85
SHANK2-209ENST00000445654 CYB5RLQ6IPT4 315 aa26.56■■□□□ 1.84
SHANK2-209ENST00000445654 TRHP20396 242 aaPredicted RBP26.53■■□□□ 1.84
SHANK2-209ENST00000445654 TOPBP1Q92547 1522 aa26.53■■□□□ 1.84
SHANK2-209ENST00000445654 EIF4G3O43432 1585 aaKnown RBP26.53■■□□□ 1.84
SHANK2-209ENST00000445654 CHD1O14646 1710 aa26.43■■□□□ 1.82
SHANK2-209ENST00000445654 DNMBPQ6XZF7 1577 aa26.42■■□□□ 1.82
SHANK2-209ENST00000445654 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
SHANK2-209ENST00000445654 CCDC88BA6NC98 1476 aa26.4■■□□□ 1.82
SHANK2-209ENST00000445654 TARBP1Q13395 1621 aaKnown RBP26.34■■□□□ 1.81
SHANK2-209ENST00000445654 AQRO60306 1485 aaKnown RBP eCLIP26.32■■□□□ 1.8
SHANK2-209ENST00000445654 FBLN2P98095 1184 aa26.32■■□□□ 1.8
SHANK2-209ENST00000445654 AEBP2Q6ZN18 517 aaPredicted RBP26.28■■□□□ 1.8
SHANK2-209ENST00000445654 POLA1P09884 1462 aaPredicted RBP26.21■■□□□ 1.79
SHANK2-209ENST00000445654 WDR97A6NE52 1622 aa26.19■■□□□ 1.78
SHANK2-209ENST00000445654 SYNJ1O43426 1573 aa26.15■■□□□ 1.78
SHANK2-209ENST00000445654 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.77
SHANK2-209ENST00000445654 SOGA1O94964 1423 aa26.11■■□□□ 1.77
SHANK2-209ENST00000445654 CHMP7Q8WUX9 453 aaPredicted RBP26.09■■□□□ 1.77
SHANK2-209ENST00000445654 SNAPC4Q5SXM2 1469 aa26.09■■□□□ 1.77
SHANK2-209ENST00000445654 MAGI1Q96QZ7 1491 aaPredicted RBP26.08■■□□□ 1.77
SHANK2-209ENST00000445654 TDRD9Q8NDG6 1382 aaKnown RBP26.07■■□□□ 1.76
SHANK2-209ENST00000445654 RAD54L2Q9Y4B4 1467 aa26.06■■□□□ 1.76
SHANK2-209ENST00000445654 GRIN2BQ13224 1484 aa25.99■■□□□ 1.75
SHANK2-209ENST00000445654 SYNJ2O15056 1496 aa25.97■■□□□ 1.75
SHANK2-209ENST00000445654 FGD5Q6ZNL6 1462 aa25.96■■□□□ 1.75
SHANK2-209ENST00000445654 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
SHANK2-209ENST00000445654 PBRM1Q86U86 1689 aa25.81■■□□□ 1.72
SHANK2-209ENST00000445654 CUX1P39880 1505 aa25.81■■□□□ 1.72
SHANK2-209ENST00000445654 ABCA10Q8WWZ4 1543 aa25.68■■□□□ 1.7
SHANK2-209ENST00000445654 ABCA5Q8WWZ7 1642 aa25.66■■□□□ 1.7
SHANK2-209ENST00000445654 GRIN2AQ12879 1464 aa25.62■■□□□ 1.69
SHANK2-209ENST00000445654 CEP170Q5SW79 1584 aa25.58■■□□□ 1.69
SHANK2-209ENST00000445654 ERCC6L2Q5T890 1561 aa25.56■■□□□ 1.68
SHANK2-209ENST00000445654 NUP160Q12769 1436 aa25.55■■□□□ 1.68
SHANK2-209ENST00000445654 SHROOM2Q13796 1616 aa25.52■■□□□ 1.68
SHANK2-209ENST00000445654 ADAMTS12P58397 1594 aa25.52■■□□□ 1.68
SHANK2-209ENST00000445654 KIF13AQ9H1H9 1805 aa25.49■■□□□ 1.67
SHANK2-209ENST00000445654 WRNQ14191 1432 aaPredicted RBP eCLIP25.47■■□□□ 1.67
SHANK2-209ENST00000445654 FHAD1B1AJZ9 1412 aa25.46■■□□□ 1.67
SHANK2-209ENST00000445654 ERICH3Q5RHP9 1530 aa25.37■■□□□ 1.65
SHANK2-209ENST00000445654 PRG4Q92954 1404 aaPredicted RBP25.36■■□□□ 1.65
SHANK2-209ENST00000445654 NPM1P06748 294 aaKnown RBP eCLIP25.35■■□□□ 1.65
SHANK2-209ENST00000445654 ABCC10Q5T3U5 1492 aa25.34■■□□□ 1.65
SHANK2-209ENST00000445654 FAM69CQ0P6D2 419 aa25.31■■□□□ 1.64
SHANK2-209ENST00000445654 BIVM-ERCC5R4GMW8 1640 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms