RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
FOXN3-203ENST00000553353 CHIC1Q5VXU3 224 aa17.6■□□□□ 0.41
FOXN3-203ENST00000553353 SENP3Q9H4L4 574 aaPredicted RBP15.94■□□□□ 0.14
FOXN3-203ENST00000553353 PHF23Q9BUL5 403 aaPredicted RBP15.68■□□□□ 0.1
FOXN3-203ENST00000553353 FOXD1Q16676 465 aa14.8□□□□□ -0.04
FOXN3-203ENST00000553353 PLPPR3Q6T4P5 718 aa14.07□□□□□ -0.16
FOXN3-203ENST00000553353 MSH5O43196 834 aa13.97□□□□□ -0.17
FOXN3-203ENST00000553353 PIAS4Q8N2W9 510 aaPredicted RBP13.82□□□□□ -0.2
FOXN3-203ENST00000553353 PPP6R1Q9UPN7 881 aa13.75□□□□□ -0.21
FOXN3-203ENST00000553353 ADRA2BP18089 450 aa13.7□□□□□ -0.22
FOXN3-203ENST00000553353 POTEDQ86YR6 584 aa13.7□□□□□ -0.22
FOXN3-203ENST00000553353 SCAF1Q9H7N4 1312 aaKnown RBP12.66□□□□□ -0.38
FOXN3-203ENST00000553353 DMRT2Q9Y5R5 561 aa12.6□□□□□ -0.39
FOXN3-203ENST00000553353 MAPK8IP2Q13387 824 aaPredicted RBP12.59□□□□□ -0.39
FOXN3-203ENST00000553353 PPP4R3CPQ6ZMV5 832 aa12.28□□□□□ -0.44
FOXN3-203ENST00000553353 HOXD11P31277 338 aaPredicted RBP12.12□□□□□ -0.47
FOXN3-203ENST00000553353 CNKSR2Q8WXI2 1034 aa12.1□□□□□ -0.47
FOXN3-203ENST00000553353 DCAF8L1A6NGE4 600 aa12.05□□□□□ -0.48
FOXN3-203ENST00000553353 RNF216Q9NWF9 866 aaPredicted RBP12.03□□□□□ -0.48
FOXN3-203ENST00000553353 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
FOXN3-203ENST00000553353 RNF39Q9H2S5 420 aa11.87□□□□□ -0.51
FOXN3-203ENST00000553353 NCBP3Q53F19 620 aaKnown RBP11.85□□□□□ -0.51
FOXN3-203ENST00000553353 DNAJC5BQ9UF47 199 aa11.8□□□□□ -0.52
FOXN3-203ENST00000553353 C1QBPQ07021 282 aaKnown RBP11.74□□□□□ -0.53
FOXN3-203ENST00000553353 NPM3O75607 178 aaKnown RBP11.6□□□□□ -0.55
FOXN3-203ENST00000553353 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.53□□□□□ -0.56
FOXN3-203ENST00000553353 KCNA4P22459 653 aa11.27□□□□□ -0.61
FOXN3-203ENST00000553353 U3KPZ7 1027 aaPredicted RBP11.25□□□□□ -0.61
FOXN3-203ENST00000553353 CAPN15O75808 1086 aa11.11□□□□□ -0.63
FOXN3-203ENST00000553353 SPINK5Q9NQ38 1064 aaPredicted RBP11.09□□□□□ -0.63
FOXN3-203ENST00000553353 SLC4A2P04920 1241 aa11.08□□□□□ -0.64
FOXN3-203ENST00000553353 DSG3P32926 999 aa11.07□□□□□ -0.64
FOXN3-203ENST00000553353 APLP2Q06481 763 aa11.05□□□□□ -0.64
FOXN3-203ENST00000553353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.02□□□□□ -0.65
FOXN3-203ENST00000553353 HNRNPUL2Q1KMD3 747 aaKnown RBP11.02□□□□□ -0.65
FOXN3-203ENST00000553353 ZNF219Q9P2Y4 722 aaPredicted RBP10.95□□□□□ -0.66
FOXN3-203ENST00000553353 SAMD1Q6SPF0 538 aaPredicted RBP10.92□□□□□ -0.66
FOXN3-203ENST00000553353 TRHP20396 242 aaPredicted RBP10.91□□□□□ -0.66
FOXN3-203ENST00000553353 ABCB7O75027 752 aa10.8□□□□□ -0.68
FOXN3-203ENST00000553353 MYCNP04198 464 aaPredicted RBP10.77□□□□□ -0.69
FOXN3-203ENST00000553353 POTEHQ6S545 545 aa10.73□□□□□ -0.69
FOXN3-203ENST00000553353 SLC4A1APQ9BWU0 796 aaKnown RBP10.66□□□□□ -0.7
FOXN3-203ENST00000553353 RBM42Q9BTD8 480 aaKnown RBP10.64□□□□□ -0.71
FOXN3-203ENST00000553353 POLA2Q14181 598 aa10.61□□□□□ -0.71
FOXN3-203ENST00000553353 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
FOXN3-203ENST00000553353 ZBTB12Q9Y330 459 aaPredicted RBP10.47□□□□□ -0.73
FOXN3-203ENST00000553353 ATF5Q9Y2D1 282 aaPredicted RBP10.44□□□□□ -0.74
FOXN3-203ENST00000553353 CHRDL2Q6WN34 429 aa10.38□□□□□ -0.75
FOXN3-203ENST00000553353 AKT1S1Q96B36 256 aa10.35□□□□□ -0.75
FOXN3-203ENST00000553353 ZBTB22O15209 634 aa10.34□□□□□ -0.75
FOXN3-203ENST00000553353 ATXN8OSP0DMR3 200 aa10.34□□□□□ -0.75
FOXN3-203ENST00000553353 OSCARQ8IYS5 282 aa10.24□□□□□ -0.77
FOXN3-203ENST00000553353 REM2Q8IYK8 340 aaPredicted RBP10.22□□□□□ -0.77
FOXN3-203ENST00000553353 FBLN2P98095 1184 aa10.15□□□□□ -0.78
FOXN3-203ENST00000553353 SPDYE2BA6NHP3 402 aa10.1□□□□□ -0.79
FOXN3-203ENST00000553353 SPDYE6P0CI01 402 aa10.1□□□□□ -0.79
FOXN3-203ENST00000553353 SPDYE2Q495Y8 402 aa10.1□□□□□ -0.79
FOXN3-203ENST00000553353 PIP4P2Q8N4L2 257 aa10.1□□□□□ -0.79
FOXN3-203ENST00000553353 PITPNM1O00562 1244 aa10.09□□□□□ -0.79
FOXN3-203ENST00000553353 FXR2P51116 673 aaKnown RBP eCLIP10.05□□□□□ -0.8
FOXN3-203ENST00000553353 SP7Q8TDD2 431 aaPredicted RBP10.03□□□□□ -0.8
FOXN3-203ENST00000553353 MKRN4PQ13434 485 aaPredicted RBP9.98□□□□□ -0.81
FOXN3-203ENST00000553353 HAX1O00165 279 aa9.95□□□□□ -0.82
FOXN3-203ENST00000553353 SPDYE1Q8NFV5 336 aaPredicted RBP9.95□□□□□ -0.82
FOXN3-203ENST00000553353 ZNF692Q9BU19 519 aaPredicted RBP9.95□□□□□ -0.82
FOXN3-203ENST00000553353 SSUH2Q9Y2M2 353 aa9.93□□□□□ -0.82
FOXN3-203ENST00000553353 CLEC11AQ9Y240 323 aa9.88□□□□□ -0.83
FOXN3-203ENST00000553353 PRKAR2AP13861 404 aaKnown RBP9.84□□□□□ -0.83
FOXN3-203ENST00000553353 CSRNP3Q8WYN3 585 aa9.82□□□□□ -0.84
FOXN3-203ENST00000553353 PABPN1Q86U42 306 aaKnown RBP eCLIP9.77□□□□□ -0.85
FOXN3-203ENST00000553353 EVX2Q03828 476 aa9.76□□□□□ -0.85
FOXN3-203ENST00000553353 PRR29P0C7W0 189 aa9.75□□□□□ -0.85
FOXN3-203ENST00000553353 C19orf67A6NJJ6 358 aa9.73□□□□□ -0.85
FOXN3-203ENST00000553353 CHADLQ6NUI6 762 aa9.67□□□□□ -0.86
FOXN3-203ENST00000553353 EHMT2Q96KQ7 1210 aa9.61□□□□□ -0.87
FOXN3-203ENST00000553353 GABBR2O75899 941 aa9.59□□□□□ -0.87
FOXN3-203ENST00000553353 FARP1Q9Y4F1 1045 aaPredicted RBP9.58□□□□□ -0.88
FOXN3-203ENST00000553353 STAG3Q9UJ98 1225 aa9.57□□□□□ -0.88
FOXN3-203ENST00000553353 CLCN6P51797 869 aa9.54□□□□□ -0.88
FOXN3-203ENST00000553353 CD44P16070 742 aaKnown RBP9.53□□□□□ -0.88
FOXN3-203ENST00000553353 SPDYE4A6NLX3 237 aa9.51□□□□□ -0.89
FOXN3-203ENST00000553353 CREBZFQ9NS37 354 aa9.44□□□□□ -0.9
FOXN3-203ENST00000553353 LHX8Q68G74 356 aa9.41□□□□□ -0.9
FOXN3-203ENST00000553353 ZNF579Q8NAF0 562 aaKnown RBP9.39□□□□□ -0.91
FOXN3-203ENST00000553353 ZRANB1Q9UGI0 708 aa9.38□□□□□ -0.91
FOXN3-203ENST00000553353 POTEIP0CG38 1075 aa9.35□□□□□ -0.91
FOXN3-203ENST00000553353 PAK3O75914 559 aaPredicted RBP9.34□□□□□ -0.91
FOXN3-203ENST00000553353 NPM1P06748 294 aaKnown RBP eCLIP9.34□□□□□ -0.91
FOXN3-203ENST00000553353 DCBLD2Q96PD2 775 aa9.34□□□□□ -0.91
FOXN3-203ENST00000553353 MNX1P50219 401 aaPredicted RBP9.28□□□□□ -0.92
FOXN3-203ENST00000553353 PROM2Q8N271 834 aa9.28□□□□□ -0.92
FOXN3-203ENST00000553353 GALR2O43603 387 aaPredicted RBP9.24□□□□□ -0.93
FOXN3-203ENST00000553353 PHF12Q96QT6 1004 aa9.2□□□□□ -0.94
FOXN3-203ENST00000553353 PLEKHG5O94827 1062 aa9.15□□□□□ -0.94
FOXN3-203ENST00000553353 ASTLQ6HA08 431 aaPredicted RBP9.09□□□□□ -0.95
FOXN3-203ENST00000553353 MIER1Q8N108 512 aa9.09□□□□□ -0.95
FOXN3-203ENST00000553353 MS4A3Q96HJ5 214 aa9.09□□□□□ -0.95
FOXN3-203ENST00000553353 TSPYL2Q9H2G4 693 aaPredicted RBP9.09□□□□□ -0.95
FOXN3-203ENST00000553353 CCDC61Q9Y6R9 512 aa9.08□□□□□ -0.96
FOXN3-203ENST00000553353 PELP1Q8IZL8 1130 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms