RNA–Protein interactions for RNA: ENST00000588010.5

RANBP3-214, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-214ENST00000588010 AEBP2Q6ZN18 517 aaPredicted RBP17■□□□□ 0.31
RANBP3-214ENST00000588010 CHIC1Q5VXU3 224 aa16.85■□□□□ 0.29
RANBP3-214ENST00000588010 PHF23Q9BUL5 403 aaPredicted RBP14.81□□□□□ -0.04
RANBP3-214ENST00000588010 SENP3Q9H4L4 574 aaPredicted RBP14.44□□□□□ -0.1
RANBP3-214ENST00000588010 PLPPR3Q6T4P5 718 aa13.82□□□□□ -0.2
RANBP3-214ENST00000588010 FOXD1Q16676 465 aa13.34□□□□□ -0.27
RANBP3-214ENST00000588010 ADRA2BP18089 450 aa13.04□□□□□ -0.32
RANBP3-214ENST00000588010 PPP6R1Q9UPN7 881 aa13□□□□□ -0.33
RANBP3-214ENST00000588010 PIAS4Q8N2W9 510 aaPredicted RBP12.7□□□□□ -0.38
RANBP3-214ENST00000588010 MSH5O43196 834 aa12.25□□□□□ -0.45
RANBP3-214ENST00000588010 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
RANBP3-214ENST00000588010 KCNA4P22459 653 aa12.18□□□□□ -0.46
RANBP3-214ENST00000588010 NCBP3Q53F19 620 aaKnown RBP11.98□□□□□ -0.49
RANBP3-214ENST00000588010 SCAF1Q9H7N4 1312 aaKnown RBP11.96□□□□□ -0.49
RANBP3-214ENST00000588010 CNKSR2Q8WXI2 1034 aa11.8□□□□□ -0.52
RANBP3-214ENST00000588010 NPM3O75607 178 aaKnown RBP11.76□□□□□ -0.53
RANBP3-214ENST00000588010 MAPK8IP2Q13387 824 aaPredicted RBP11.75□□□□□ -0.53
RANBP3-214ENST00000588010 SLC4A1APQ9BWU0 796 aaKnown RBP11.67□□□□□ -0.54
RANBP3-214ENST00000588010 EHMT2Q96KQ7 1210 aa11.65□□□□□ -0.54
RANBP3-214ENST00000588010 DMRT2Q9Y5R5 561 aa11.53□□□□□ -0.56
RANBP3-214ENST00000588010 RNF216Q9NWF9 866 aaPredicted RBP11.5□□□□□ -0.57
RANBP3-214ENST00000588010 HOXD11P31277 338 aaPredicted RBP11.37□□□□□ -0.59
RANBP3-214ENST00000588010 CSRNP3Q8WYN3 585 aa11.32□□□□□ -0.6
RANBP3-214ENST00000588010 DNAJC5BQ9UF47 199 aa11.3□□□□□ -0.6
RANBP3-214ENST00000588010 ZBTB22O15209 634 aa11.19□□□□□ -0.62
RANBP3-214ENST00000588010 FOXD4L1Q9NU39 408 aa11.16□□□□□ -0.62
RANBP3-214ENST00000588010 DCAF8L1A6NGE4 600 aa11.14□□□□□ -0.63
RANBP3-214ENST00000588010 SLC4A2P04920 1241 aa11.02□□□□□ -0.65
RANBP3-214ENST00000588010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.92□□□□□ -0.662e-7■□□□□ 10.3
RANBP3-214ENST00000588010 MYCNP04198 464 aaPredicted RBP10.89□□□□□ -0.67
RANBP3-214ENST00000588010 ATXN8OSP0DMR3 200 aa10.72□□□□□ -0.69
RANBP3-214ENST00000588010 POTEDQ86YR6 584 aa10.72□□□□□ -0.69
RANBP3-214ENST00000588010 U3KPZ7 1027 aaPredicted RBP10.71□□□□□ -0.69
RANBP3-214ENST00000588010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.7□□□□□ -0.7
RANBP3-214ENST00000588010 HNRNPUL2Q1KMD3 747 aaKnown RBP10.7□□□□□ -0.7
RANBP3-214ENST00000588010 SAMD1Q6SPF0 538 aaPredicted RBP10.67□□□□□ -0.7
RANBP3-214ENST00000588010 APLP2Q06481 763 aa10.56□□□□□ -0.72
RANBP3-214ENST00000588010 ATF5Q9Y2D1 282 aaPredicted RBP10.55□□□□□ -0.72
RANBP3-214ENST00000588010 RNF39Q9H2S5 420 aa10.49□□□□□ -0.73
RANBP3-214ENST00000588010 NISCHQ9Y2I1 1504 aa10.48□□□□□ -0.73
RANBP3-214ENST00000588010 C1QBPQ07021 282 aaKnown RBP10.39□□□□□ -0.75
RANBP3-214ENST00000588010 ZNF219Q9P2Y4 722 aaPredicted RBP10.38□□□□□ -0.75
RANBP3-214ENST00000588010 CAPN15O75808 1086 aa10.36□□□□□ -0.75
RANBP3-214ENST00000588010 TRHP20396 242 aaPredicted RBP10.36□□□□□ -0.75
RANBP3-214ENST00000588010 SPINK5Q9NQ38 1064 aaPredicted RBP10.36□□□□□ -0.75
RANBP3-214ENST00000588010 FKBP8Q14318 412 aa10.29□□□□□ -0.76
RANBP3-214ENST00000588010 POLA2Q14181 598 aa10.21□□□□□ -0.77
RANBP3-214ENST00000588010 ABCB7O75027 752 aa10.17□□□□□ -0.78
RANBP3-214ENST00000588010 FBLN2P98095 1184 aa10.16□□□□□ -0.78
RANBP3-214ENST00000588010 CACNB1Q02641 598 aaPredicted RBP10.1□□□□□ -0.79
RANBP3-214ENST00000588010 MKRN4PQ13434 485 aaPredicted RBP10.09□□□□□ -0.79
RANBP3-214ENST00000588010 ZBTB12Q9Y330 459 aaPredicted RBP10.08□□□□□ -0.8
RANBP3-214ENST00000588010 DSG3P32926 999 aa10.06□□□□□ -0.8
RANBP3-214ENST00000588010 SPDYE4A6NLX3 237 aa10.03□□□□□ -0.8
RANBP3-214ENST00000588010 OSCARQ8IYS5 282 aa9.88□□□□□ -0.83
RANBP3-214ENST00000588010 FBXO3Q9UK99 471 aa9.85□□□□□ -0.83
RANBP3-214ENST00000588010 ZNF692Q9BU19 519 aaPredicted RBP9.83□□□□□ -0.84
RANBP3-214ENST00000588010 PROM2Q8N271 834 aa9.82□□□□□ -0.84
RANBP3-214ENST00000588010 SPDYE2BA6NHP3 402 aa9.81□□□□□ -0.84
RANBP3-214ENST00000588010 SPDYE6P0CI01 402 aa9.81□□□□□ -0.84
RANBP3-214ENST00000588010 SPDYE2Q495Y8 402 aa9.81□□□□□ -0.84
RANBP3-214ENST00000588010 AMER1Q5JTC6 1135 aaPredicted RBP9.79□□□□□ -0.84
RANBP3-214ENST00000588010 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
RANBP3-214ENST00000588010 SSUH2Q9Y2M2 353 aa9.73□□□□□ -0.85
RANBP3-214ENST00000588010 PABPN1Q86U42 306 aaKnown RBP eCLIP9.71□□□□□ -0.86
RANBP3-214ENST00000588010 VASPP50552 380 aaPredicted RBP9.69□□□□□ -0.86
RANBP3-214ENST00000588010 RBM42Q9BTD8 480 aaKnown RBP9.63□□□□□ -0.87
RANBP3-214ENST00000588010 ABCC9O60706 1549 aa9.61□□□□□ -0.87
RANBP3-214ENST00000588010 STAG3Q9UJ98 1225 aa9.6□□□□□ -0.87
RANBP3-214ENST00000588010 IFNLR1Q8IU57 520 aaPredicted RBP9.56□□□□□ -0.88
RANBP3-214ENST00000588010 PLCD3Q8N3E9 789 aa9.54□□□□□ -0.88
RANBP3-214ENST00000588010 AKT1S1Q96B36 256 aa9.53□□□□□ -0.88
RANBP3-214ENST00000588010 KLHL34Q8N239 644 aa9.52□□□□□ -0.89
RANBP3-214ENST00000588010 MIER1Q8N108 512 aa9.51□□□□□ -0.89
RANBP3-214ENST00000588010 PLEKHG5O94827 1062 aa9.49□□□□□ -0.89
RANBP3-214ENST00000588010 SPDYE1Q8NFV5 336 aaPredicted RBP9.48□□□□□ -0.89
RANBP3-214ENST00000588010 CLEC11AQ9Y240 323 aa9.46□□□□□ -0.9
RANBP3-214ENST00000588010 REM2Q8IYK8 340 aaPredicted RBP9.44□□□□□ -0.9
RANBP3-214ENST00000588010 SPOCK2Q92563 424 aa9.43□□□□□ -0.9
RANBP3-214ENST00000588010 ZBTB47Q9UFB7 747 aaPredicted RBP9.41□□□□□ -0.9
RANBP3-214ENST00000588010 PRR29P0C7W0 189 aa9.39□□□□□ -0.91
RANBP3-214ENST00000588010 PITPNM1O00562 1244 aa9.33□□□□□ -0.92
RANBP3-214ENST00000588010 DCAF8L2P0C7V8 631 aa9.33□□□□□ -0.92
RANBP3-214ENST00000588010 CCDC180Q9P1Z9 1646 aa9.31□□□□□ -0.92
RANBP3-214ENST00000588010 PKD2Q13563 968 aa9.31□□□□□ -0.92
RANBP3-214ENST00000588010 CIZ1Q9ULV3 898 aaPredicted RBP9.29□□□□□ -0.92
RANBP3-214ENST00000588010 ECM2O94769 699 aaPredicted RBP9.28□□□□□ -0.92
RANBP3-214ENST00000588010 CREBZFQ9NS37 354 aa9.27□□□□□ -0.93
RANBP3-214ENST00000588010 SLC24A1O60721 1099 aa9.22□□□□□ -0.93
RANBP3-214ENST00000588010 GSE1Q14687 1217 aa9.19□□□□□ -0.94
RANBP3-214ENST00000588010 NPM1P06748 294 aaKnown RBP eCLIP9.18□□□□□ -0.94
RANBP3-214ENST00000588010 MNX1P50219 401 aaPredicted RBP9.18□□□□□ -0.94
RANBP3-214ENST00000588010 NUBP1P53384 320 aa9.18□□□□□ -0.94
RANBP3-214ENST00000588010 DCAF8Q5TAQ9 597 aa9.18□□□□□ -0.94
RANBP3-214ENST00000588010 CHADLQ6NUI6 762 aa9.18□□□□□ -0.94
RANBP3-214ENST00000588010 FAM212AQ96EL1 285 aa9.17□□□□□ -0.94
RANBP3-214ENST00000588010 TRIM41Q8WV44 630 aa9.16□□□□□ -0.94
RANBP3-214ENST00000588010 RGL2O15211 777 aa9.14□□□□□ -0.95
RANBP3-214ENST00000588010 PRKAR2AP13861 404 aaKnown RBP9.12□□□□□ -0.95
RANBP3-214ENST00000588010 CHRDL2Q6WN34 429 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms