RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 NISCHQ9Y2I1 1504 aa31.87■■■□□ 2.69
CTSD-210ENST00000637381 CCDC180Q9P1Z9 1646 aa28.56■■■□□ 2.16
CTSD-210ENST00000637381 ABCC9O60706 1549 aa28.29■■■□□ 2.12
CTSD-210ENST00000637381 RB1CC1Q8TDY2 1594 aa27.07■■□□□ 1.92
CTSD-210ENST00000637381 NACADO15069 1562 aa26.95■■□□□ 1.9
CTSD-210ENST00000637381 MYO15BQ96JP2 1530 aa26.7■■□□□ 1.86
CTSD-210ENST00000637381 DCAF8L2P0C7V8 631 aa26.68■■□□□ 1.86
CTSD-210ENST00000637381 UNC13AQ9UPW8 1703 aa26.51■■□□□ 1.83
CTSD-210ENST00000637381 DNAJC5BQ9UF47 199 aa26.47■■□□□ 1.83
CTSD-210ENST00000637381 ZCCHC6Q5VYS8 1495 aaKnown RBP26.43■■□□□ 1.82
CTSD-210ENST00000637381 DCAF1Q9Y4B6 1507 aa26.39■■□□□ 1.82
CTSD-210ENST00000637381 PABPN1Q86U42 306 aaKnown RBP eCLIP26.35■■□□□ 1.81
CTSD-210ENST00000637381 BICRAQ9NZM4 1560 aa26.32■■□□□ 1.8
CTSD-210ENST00000637381 SHROOM4Q9ULL8 1493 aa25.99■■□□□ 1.75
CTSD-210ENST00000637381 SCRIBQ14160 1630 aa25.92■■□□□ 1.74
CTSD-210ENST00000637381 CC2D2AQ9P2K1 1620 aa25.63■■□□□ 1.69
CTSD-210ENST00000637381 EIF4G1Q04637 1599 aaKnown RBP25.61■■□□□ 1.69
CTSD-210ENST00000637381 CECR2Q9BXF3 1484 aa25.5■■□□□ 1.67
CTSD-210ENST00000637381 NCAPD3P42695 1498 aa24.89■■□□□ 1.58
CTSD-210ENST00000637381 SMARCA4P51532 1647 aa24.81■■□□□ 1.56
CTSD-210ENST00000637381 ATAD2BQ9ULI0 1458 aa24.8■■□□□ 1.56
CTSD-210ENST00000637381 SMARCA2P51531 1590 aa24.74■■□□□ 1.55
CTSD-210ENST00000637381 BAZ1AQ9NRL2 1556 aaPredicted RBP24.71■■□□□ 1.55
CTSD-210ENST00000637381 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
CTSD-210ENST00000637381 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
CTSD-210ENST00000637381 MROH2BQ7Z745 1585 aa24.53■■□□□ 1.52
CTSD-210ENST00000637381 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
CTSD-210ENST00000637381 ERCC6Q03468 1493 aa24.39■■□□□ 1.5
CTSD-210ENST00000637381 CUX2O14529 1486 aa24.38■■□□□ 1.49
CTSD-210ENST00000637381 NESP48681 1621 aa24.37■■□□□ 1.49
CTSD-210ENST00000637381 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
CTSD-210ENST00000637381 WIZO95785 1651 aa24.24■■□□□ 1.47
CTSD-210ENST00000637381 DNAJC5Q9H3Z4 198 aa24.21■■□□□ 1.47
CTSD-210ENST00000637381 THOC2Q8NI27 1593 aaKnown RBP24.13■■□□□ 1.45
CTSD-210ENST00000637381 PDS5BQ9NTI5 1447 aa24.11■■□□□ 1.45
CTSD-210ENST00000637381 CADPSQ9ULU8 1353 aa24.11■■□□□ 1.45
CTSD-210ENST00000637381 KIF21AQ7Z4S6 1674 aa24.1■■□□□ 1.45
CTSD-210ENST00000637381 RSF1Q96T23 1441 aaPredicted RBP24.09■■□□□ 1.45
CTSD-210ENST00000637381 TOP2AP11388 1531 aaKnown RBP23.94■■□□□ 1.42
CTSD-210ENST00000637381 CFTRP13569 1480 aa23.88■■□□□ 1.41
CTSD-210ENST00000637381 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
CTSD-210ENST00000637381 WDR62O43379 1518 aa23.84■■□□□ 1.41
CTSD-210ENST00000637381 FANCD2Q9BXW9 1451 aa23.8■■□□□ 1.4
CTSD-210ENST00000637381 CEP164Q9UPV0 1460 aa23.8■■□□□ 1.4
CTSD-210ENST00000637381 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
CTSD-210ENST00000637381 PRDM2Q13029 1718 aa23.68■■□□□ 1.38
CTSD-210ENST00000637381 URB2Q14146 1524 aaKnown RBP23.61■■□□□ 1.37
CTSD-210ENST00000637381 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
CTSD-210ENST00000637381 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
CTSD-210ENST00000637381 IFT140Q96RY7 1462 aa23.34■■□□□ 1.33
CTSD-210ENST00000637381 DNMBPQ6XZF7 1577 aa23.31■■□□□ 1.32
CTSD-210ENST00000637381 OSCARQ8IYS5 282 aa23.28■■□□□ 1.32
CTSD-210ENST00000637381 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
CTSD-210ENST00000637381 TARBP1Q13395 1621 aaKnown RBP23.21■■□□□ 1.31
CTSD-210ENST00000637381 EIF4G3O43432 1585 aaKnown RBP23.16■■□□□ 1.3
CTSD-210ENST00000637381 POLA1P09884 1462 aaPredicted RBP23.15■■□□□ 1.3
CTSD-210ENST00000637381 AQRO60306 1485 aaKnown RBP eCLIP23.08■■□□□ 1.291e-6■■■■■ 33.9
CTSD-210ENST00000637381 TRIM41Q8WV44 630 aa23.07■■□□□ 1.28
CTSD-210ENST00000637381 CUX1P39880 1505 aa23.04■■□□□ 1.28
CTSD-210ENST00000637381 SOGA1O94964 1423 aa23.04■■□□□ 1.28
CTSD-210ENST00000637381 RAD54L2Q9Y4B4 1467 aa23.04■■□□□ 1.28
CTSD-210ENST00000637381 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
CTSD-210ENST00000637381 SUPT5HO00267 1087 aaKnown RBP23.01■■□□□ 1.27
CTSD-210ENST00000637381 WDR97A6NE52 1622 aa23■■□□□ 1.27
CTSD-210ENST00000637381 CHD1O14646 1710 aa22.97■■□□□ 1.27
CTSD-210ENST00000637381 RIMBP3CA6NJZ7 1639 aa22.96■■□□□ 1.27
CTSD-210ENST00000637381 RIMBP3BA6NNM3 1639 aa22.96■■□□□ 1.27
CTSD-210ENST00000637381 RIMBP3Q9UFD9 1639 aa22.96■■□□□ 1.27
CTSD-210ENST00000637381 TDRD9Q8NDG6 1382 aaKnown RBP22.95■■□□□ 1.26
CTSD-210ENST00000637381 ARHGEF11O15085 1522 aa22.89■■□□□ 1.26
CTSD-210ENST00000637381 GRIN2BQ13224 1484 aa22.83■■□□□ 1.25
CTSD-210ENST00000637381 SNAPC4Q5SXM2 1469 aa22.83■■□□□ 1.25
CTSD-210ENST00000637381 MAGI1Q96QZ7 1491 aaPredicted RBP22.83■■□□□ 1.25
CTSD-210ENST00000637381 FBLN2P98095 1184 aa22.82■■□□□ 1.24
CTSD-210ENST00000637381 ABCA10Q8WWZ4 1543 aa22.8■■□□□ 1.24
CTSD-210ENST00000637381 GAPVD1Q14C86 1478 aa22.77■■□□□ 1.24
CTSD-210ENST00000637381 PBRM1Q86U86 1689 aa22.76■■□□□ 1.23
CTSD-210ENST00000637381 ABCA5Q8WWZ7 1642 aa22.75■■□□□ 1.23
CTSD-210ENST00000637381 BIVM-ERCC5R4GMW8 1640 aa22.75■■□□□ 1.23
CTSD-210ENST00000637381 SYNJ2O15056 1496 aa22.74■■□□□ 1.23
CTSD-210ENST00000637381 CLASP1Q7Z460 1538 aa22.74■■□□□ 1.23
CTSD-210ENST00000637381 TOP2BQ02880 1626 aa22.74■■□□□ 1.23
CTSD-210ENST00000637381 CHMP7Q8WUX9 453 aaPredicted RBP22.73■■□□□ 1.23
CTSD-210ENST00000637381 WRNQ14191 1432 aaPredicted RBP eCLIP22.71■■□□□ 1.23
CTSD-210ENST00000637381 SYNJ1O43426 1573 aa22.7■■□□□ 1.22
CTSD-210ENST00000637381 CYB5RLQ6IPT4 315 aa22.68■■□□□ 1.22
CTSD-210ENST00000637381 ARAP1Q96P48 1450 aa22.67■■□□□ 1.22
CTSD-210ENST00000637381 ADAMTS12P58397 1594 aa22.54■■□□□ 1.2
CTSD-210ENST00000637381 GRIN2AQ12879 1464 aa22.54■■□□□ 1.2
CTSD-210ENST00000637381 ERICH3Q5RHP9 1530 aa22.52■■□□□ 1.2
CTSD-210ENST00000637381 FHAD1B1AJZ9 1412 aa22.48■■□□□ 1.19
CTSD-210ENST00000637381 NUP160Q12769 1436 aa22.48■■□□□ 1.19
CTSD-210ENST00000637381 CEP170Q5SW79 1584 aa22.45■■□□□ 1.18
CTSD-210ENST00000637381 SHROOM2Q13796 1616 aa22.39■■□□□ 1.18
CTSD-210ENST00000637381 ERCC6L2Q5T890 1561 aa22.36■■□□□ 1.17
CTSD-210ENST00000637381 TRHP20396 242 aaPredicted RBP22.33■■□□□ 1.17
CTSD-210ENST00000637381 IGF1RP08069 1367 aa22.26■■□□□ 1.15
CTSD-210ENST00000637381 KIF27Q86VH2 1401 aa22.25■■□□□ 1.15
CTSD-210ENST00000637381 JPH4Q96JJ6 628 aa22.23■■□□□ 1.15
CTSD-210ENST00000637381 RUSC2Q8N2Y8 1516 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms