RNA–Protein interactions for RNA: ENST00000592133.5

RANBP3-225, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-225ENST00000592133 NISCHQ9Y2I1 1504 aa31.07■■■□□ 2.56
RANBP3-225ENST00000592133 ABCC9O60706 1549 aa28.91■■■□□ 2.22
RANBP3-225ENST00000592133 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
RANBP3-225ENST00000592133 DNAJC5BQ9UF47 199 aa27.74■■■□□ 2.03
RANBP3-225ENST00000592133 RB1CC1Q8TDY2 1594 aa27.16■■□□□ 1.94
RANBP3-225ENST00000592133 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
RANBP3-225ENST00000592133 NACADO15069 1562 aa26.8■■□□□ 1.88
RANBP3-225ENST00000592133 DCAF8L2P0C7V8 631 aa26.74■■□□□ 1.87
RANBP3-225ENST00000592133 UNC13AQ9UPW8 1703 aa26.42■■□□□ 1.82
RANBP3-225ENST00000592133 BICRAQ9NZM4 1560 aa26.34■■□□□ 1.81
RANBP3-225ENST00000592133 MYO15BQ96JP2 1530 aa26.16■■□□□ 1.78
RANBP3-225ENST00000592133 CECR2Q9BXF3 1484 aa26.11■■□□□ 1.77
RANBP3-225ENST00000592133 CC2D2AQ9P2K1 1620 aa26.01■■□□□ 1.75
RANBP3-225ENST00000592133 DNAJC5Q9H3Z4 198 aa25.99■■□□□ 1.75
RANBP3-225ENST00000592133 SHROOM4Q9ULL8 1493 aa25.92■■□□□ 1.74
RANBP3-225ENST00000592133 EIF4G1Q04637 1599 aaKnown RBP25.78■■□□□ 1.72
RANBP3-225ENST00000592133 SCRIBQ14160 1630 aa25.64■■□□□ 1.7
RANBP3-225ENST00000592133 ZCCHC6Q5VYS8 1495 aaKnown RBP25.58■■□□□ 1.69
RANBP3-225ENST00000592133 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.68
RANBP3-225ENST00000592133 CUX2O14529 1486 aa25.15■■□□□ 1.62
RANBP3-225ENST00000592133 ERCC6Q03468 1493 aa25.03■■□□□ 1.6
RANBP3-225ENST00000592133 NCAPD3P42695 1498 aa24.77■■□□□ 1.56
RANBP3-225ENST00000592133 TRIM41Q8WV44 630 aa24.65■■□□□ 1.54
RANBP3-225ENST00000592133 NESP48681 1621 aa24.61■■□□□ 1.53
RANBP3-225ENST00000592133 ATAD2BQ9ULI0 1458 aa24.6■■□□□ 1.53
RANBP3-225ENST00000592133 SMARCA2P51531 1590 aa24.48■■□□□ 1.51
RANBP3-225ENST00000592133 HMGXB3Q12766 1538 aa24.47■■□□□ 1.51
RANBP3-225ENST00000592133 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
RANBP3-225ENST00000592133 SMARCA4P51532 1647 aa24.36■■□□□ 1.49
RANBP3-225ENST00000592133 BAZ1BQ9UIG0 1483 aaKnown RBP24.34■■□□□ 1.49
RANBP3-225ENST00000592133 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
RANBP3-225ENST00000592133 PDS5BQ9NTI5 1447 aa24.25■■□□□ 1.47
RANBP3-225ENST00000592133 KIF21AQ7Z4S6 1674 aa24.2■■□□□ 1.46
RANBP3-225ENST00000592133 BAZ1AQ9NRL2 1556 aaPredicted RBP24.16■■□□□ 1.46
RANBP3-225ENST00000592133 PEG3Q9GZU2 1588 aa24.09■■□□□ 1.45
RANBP3-225ENST00000592133 MRC2Q9UBG0 1479 aa24.05■■□□□ 1.44
RANBP3-225ENST00000592133 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
RANBP3-225ENST00000592133 OSCARQ8IYS5 282 aa24■■□□□ 1.43
RANBP3-225ENST00000592133 WDR62O43379 1518 aa23.96■■□□□ 1.43
RANBP3-225ENST00000592133 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.42
RANBP3-225ENST00000592133 CEP164Q9UPV0 1460 aa23.82■■□□□ 1.4
RANBP3-225ENST00000592133 FANCD2Q9BXW9 1451 aa23.74■■□□□ 1.39
RANBP3-225ENST00000592133 RIMBP3CA6NJZ7 1639 aa23.64■■□□□ 1.38
RANBP3-225ENST00000592133 RIMBP3BA6NNM3 1639 aa23.64■■□□□ 1.38
RANBP3-225ENST00000592133 RIMBP3Q9UFD9 1639 aa23.64■■□□□ 1.38
RANBP3-225ENST00000592133 WIZO95785 1651 aa23.6■■□□□ 1.37
RANBP3-225ENST00000592133 CFTRP13569 1480 aa23.56■■□□□ 1.36
RANBP3-225ENST00000592133 URB2Q14146 1524 aaKnown RBP23.56■■□□□ 1.36
RANBP3-225ENST00000592133 ARHGEF11O15085 1522 aa23.52■■□□□ 1.36
RANBP3-225ENST00000592133 TRHP20396 242 aaPredicted RBP23.51■■□□□ 1.35
RANBP3-225ENST00000592133 CYB5RLQ6IPT4 315 aa23.5■■□□□ 1.35
RANBP3-225ENST00000592133 ZNF608Q9ULD9 1512 aaPredicted RBP23.39■■□□□ 1.34
RANBP3-225ENST00000592133 IFT140Q96RY7 1462 aa23.37■■□□□ 1.33
RANBP3-225ENST00000592133 AEBP2Q6ZN18 517 aaPredicted RBP23.35■■□□□ 1.33
RANBP3-225ENST00000592133 TOP2AP11388 1531 aaKnown RBP23.26■■□□□ 1.31
RANBP3-225ENST00000592133 ARAP1Q96P48 1450 aa23.24■■□□□ 1.31
RANBP3-225ENST00000592133 FBLN2P98095 1184 aa23.23■■□□□ 1.31
RANBP3-225ENST00000592133 RSF1Q96T23 1441 aaPredicted RBP23.22■■□□□ 1.31
RANBP3-225ENST00000592133 TOPBP1Q92547 1522 aa23.19■■□□□ 1.3
RANBP3-225ENST00000592133 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
RANBP3-225ENST00000592133 PRDM2Q13029 1718 aa23.14■■□□□ 1.3
RANBP3-225ENST00000592133 AQRO60306 1485 aaKnown RBP eCLIP23.13■■□□□ 1.297e-10■■■■■ 28.6
RANBP3-225ENST00000592133 CHD1O14646 1710 aa23.12■■□□□ 1.29
RANBP3-225ENST00000592133 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
RANBP3-225ENST00000592133 CCDC88BA6NC98 1476 aa23.05■■□□□ 1.28
RANBP3-225ENST00000592133 DNMBPQ6XZF7 1577 aa23.01■■□□□ 1.27
RANBP3-225ENST00000592133 TARBP1Q13395 1621 aaKnown RBP22.99■■□□□ 1.27
RANBP3-225ENST00000592133 TDRD9Q8NDG6 1382 aaKnown RBP22.91■■□□□ 1.26
RANBP3-225ENST00000592133 CHMP7Q8WUX9 453 aaPredicted RBP22.91■■□□□ 1.26
RANBP3-225ENST00000592133 POLA1P09884 1462 aaPredicted RBP22.91■■□□□ 1.26
RANBP3-225ENST00000592133 RAD54L2Q9Y4B4 1467 aa22.87■■□□□ 1.25
RANBP3-225ENST00000592133 SOGA1O94964 1423 aa22.85■■□□□ 1.25
RANBP3-225ENST00000592133 CLASP1Q7Z460 1538 aa22.85■■□□□ 1.25
RANBP3-225ENST00000592133 SNAPC4Q5SXM2 1469 aa22.85■■□□□ 1.25
RANBP3-225ENST00000592133 SYNJ1O43426 1573 aa22.82■■□□□ 1.24
RANBP3-225ENST00000592133 MAGI1Q96QZ7 1491 aaPredicted RBP22.74■■□□□ 1.23
RANBP3-225ENST00000592133 GAPVD1Q14C86 1478 aa22.73■■□□□ 1.23
RANBP3-225ENST00000592133 GRIN2BQ13224 1484 aa22.7■■□□□ 1.22
RANBP3-225ENST00000592133 WDR97A6NE52 1622 aa22.69■■□□□ 1.22
RANBP3-225ENST00000592133 SYNJ2O15056 1496 aa22.69■■□□□ 1.22
RANBP3-225ENST00000592133 FGD5Q6ZNL6 1462 aa22.68■■□□□ 1.22
RANBP3-225ENST00000592133 CUX1P39880 1505 aa22.52■■□□□ 1.2
RANBP3-225ENST00000592133 ERCC6L2Q5T890 1561 aa22.47■■□□□ 1.19
RANBP3-225ENST00000592133 PBRM1Q86U86 1689 aa22.47■■□□□ 1.19
RANBP3-225ENST00000592133 GRIN2AQ12879 1464 aa22.39■■□□□ 1.17
RANBP3-225ENST00000592133 CEP170Q5SW79 1584 aa22.38■■□□□ 1.17
RANBP3-225ENST00000592133 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
RANBP3-225ENST00000592133 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
RANBP3-225ENST00000592133 ILDR1Q86SU0 546 aaPredicted RBP22.33■■□□□ 1.17
RANBP3-225ENST00000592133 NUP160Q12769 1436 aa22.32■■□□□ 1.16
RANBP3-225ENST00000592133 FAM69CQ0P6D2 419 aa22.32■■□□□ 1.16
RANBP3-225ENST00000592133 KIF13AQ9H1H9 1805 aa22.31■■□□□ 1.16
RANBP3-225ENST00000592133 NPM1P06748 294 aaKnown RBP eCLIP22.27■■□□□ 1.16
RANBP3-225ENST00000592133 KDM4FA0A1W2PPD8 638 aa22.26■■□□□ 1.15
RANBP3-225ENST00000592133 SHROOM2Q13796 1616 aa22.25■■□□□ 1.15
RANBP3-225ENST00000592133 ADAMTS12P58397 1594 aa22.24■■□□□ 1.15
RANBP3-225ENST00000592133 PRG4Q92954 1404 aaPredicted RBP22.23■■□□□ 1.15
RANBP3-225ENST00000592133 FHAD1B1AJZ9 1412 aa22.23■■□□□ 1.15
RANBP3-225ENST00000592133 ABCC10Q5T3U5 1492 aa22.21■■□□□ 1.15
RANBP3-225ENST00000592133 WRNQ14191 1432 aaPredicted RBP eCLIP22.2■■□□□ 1.145e-6■■■■■ 29.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms