Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 VDAC3-210ENST00000522178 272 ntTSL 33.55□□□□□ -1.844e-8■■■□□ 17.4
RPS3P23396 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.89□□□□□ -1.954e-8■■■□□ 17.4
RPS3P23396 DHFR-204ENST00000508282 545 ntTSL 31.94□□□□□ -2.13e-32■■■□□ 17.4
RPS3P23396 TSG101-206ENST00000542488 304 ntTSL 50.49□□□□□ -2.335e-9■■■□□ 17.4
RPS3P23396 DHFR-207ENST00000513314 582 ntTSL 30.35□□□□□ -2.353e-32■■■□□ 17.4
RPS3P23396 WARS-227ENST00000556295 517 ntTSL 35.75□□□□□ -1.498e-12■■■□□ 17.4
RPS3P23396 WARS-225ENST00000555813 410 ntTSL 44.65□□□□□ -1.678e-12■■■□□ 17.4
RPS3P23396 WARS-221ENST00000555031 658 ntTSL 24.03□□□□□ -1.768e-12■■■□□ 17.4
RPS3P23396 CTSB-203ENST00000420692 2230 ntTSL 215.95■□□□□ 0.141e-11■■■□□ 17.4
RPS3P23396 ASH2L-206ENST00000520079 2119 ntTSL 211.78□□□□□ -0.522e-7■■■□□ 17.4
RPS3P23396 ASH2L-208ENST00000521808 613 ntTSL 511.27□□□□□ -0.612e-7■■■□□ 17.4
RPS3P23396 EIF4H-205ENST00000495187 575 ntTSL 39.75□□□□□ -0.852e-19■■■□□ 17.4
RPS3P23396 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.541e-7■■■□□ 17.4
RPS3P23396 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.171e-6■■■□□ 17.4
RPS3P23396 SIGMAR1-206ENST00000478146 485 ntTSL 213.98□□□□□ -0.176e-7■■■□□ 17.4
RPS3P23396 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.511e-6■■■□□ 17.4
RPS3P23396 PLOD1-203ENST00000429000 886 ntTSL 515.52■□□□□ 0.083e-9■■■□□ 17.4
RPS3P23396 ATP13A1-214ENST00000497556 2442 ntTSL 213.42□□□□□ -0.265e-7■■■□□ 17.4
RPS3P23396 ABCA13-201ENST00000411975 4480 ntTSL 211.59□□□□□ -0.555e-7■■■□□ 17.4
RPS3P23396 ABCA13-205ENST00000453246 4275 ntTSL 29.48□□□□□ -0.895e-7■■■□□ 17.4
RPS3P23396 ABCA13-207ENST00000544596 7870 ntAPPRIS ALT2 TSL 1 (best)7.81□□□□□ -1.165e-7■■■□□ 17.4
RPS3P23396 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.635e-7■■■□□ 17.4
RPS3P23396 GTF3C1-211ENST00000569653 897 ntTSL 213.28□□□□□ -0.282e-6■■■□□ 17.4
RPS3P23396 CCT5-203ENST00000503026 1933 ntTSL 2 BASIC11.49□□□□□ -0.574e-8■■■□□ 17.4
RPS3P23396 CCT5-213ENST00000515390 1728 ntTSL 2 BASIC8.94□□□□□ -0.984e-8■■■□□ 17.4
RPS3P23396 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.194e-8■■■□□ 17.4
RPS3P23396 ATP13A1-207ENST00000473243 4729 ntTSL 214.27□□□□□ -0.135e-7■■■□□ 17.4
RPS3P23396 ATP13A1-201ENST00000291503 3483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.715e-7■■■□□ 17.4
RPS3P23396 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.83e-10■■■□□ 17.4
RPS3P23396 LPCAT1-202ENST00000475622 5610 ntTSL 517.14■□□□□ 0.331e-6■■■□□ 17.4
RPS3P23396 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.281e-6■■■□□ 17.4
RPS3P23396 PSMA6-208ENST00000554843 655 ntTSL 214.68□□□□□ -0.064e-10■■■□□ 17.4
RPS3P23396 GAA-202ENST00000390015 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.645e-7■■■□□ 17.4
RPS3P23396 GAA-201ENST00000302262 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.655e-7■■■□□ 17.4
RPS3P23396 PRKDC-206ENST00000536429 659 ntTSL 312.79□□□□□ -0.363e-7■■■□□ 17.4
RPS3P23396 PRKDC-207ENST00000536483 834 ntTSL 212.08□□□□□ -0.483e-7■■■□□ 17.4
RPS3P23396 FUBP1-204ENST00000421641 802 ntTSL 511.45□□□□□ -0.584e-7■■■□□ 17.4
RPS3P23396 LMAN2-203ENST00000502721 639 ntTSL 312.91□□□□□ -0.341e-6■■■□□ 17.4
RPS3P23396 XRCC5-209ENST00000485763 616 ntTSL 26.76□□□□□ -1.338e-18■■■□□ 17.3
RPS3P23396 SLC3A2-222ENST00000546253 582 ntTSL 413.97□□□□□ -0.173e-7■■■□□ 17.3
RPS3P23396 GAPDH-206ENST00000466525 1720 ntTSL 514.69□□□□□ -0.067e-17■■■□□ 17.3
RPS3P23396 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.267e-17■■■□□ 17.3
RPS3P23396 GAPDH-207ENST00000466588 1363 ntTSL 510.86□□□□□ -0.677e-17■■■□□ 17.3
RPS3P23396 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.012e-7■■■□□ 17.3
RPS3P23396 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.222e-7■■■□□ 17.3
RPS3P23396 ATG9A-203ENST00000409033 3701 ntTSL 1 (best)12.15□□□□□ -0.462e-7■■■□□ 17.3
RPS3P23396 ATG9A-202ENST00000396761 3799 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.722e-7■■■□□ 17.3
RPS3P23396 NCLN-208ENST00000592737 2735 ntTSL 316.45■□□□□ 0.229e-8■■■□□ 17.3
RPS3P23396 SNX17-202ENST00000427123 2007 ntTSL 219.05■□□□□ 0.648e-11■■■□□ 17.3
RPS3P23396 SNX17-203ENST00000440760 1955 ntTSL 1 (best)18.9■□□□□ 0.628e-11■■■□□ 17.3
RPS3P23396 SNX17-206ENST00000484886 568 ntTSL 218.64■□□□□ 0.578e-11■■■□□ 17.3
RPS3P23396 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.548e-11■■■□□ 17.3
RPS3P23396 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.22■□□□□ 0.358e-11■■■□□ 17.3
RPS3P23396 SNX17-209ENST00000494893 966 ntTSL 216.71■□□□□ 0.278e-11■■■□□ 17.3
RPS3P23396 SNX17-204ENST00000453453 1638 ntTSL 1 (best)15.57■□□□□ 0.088e-11■■■□□ 17.3
RPS3P23396 ATP13A1-208ENST00000474955 927 ntTSL 513.57□□□□□ -0.248e-11■■■□□ 17.3
RPS3P23396 SNX17-205ENST00000464279 549 ntTSL 211.8□□□□□ -0.528e-11■■■□□ 17.3
RPS3P23396 SNX17-207ENST00000489402 743 ntTSL 28.93□□□□□ -0.988e-11■■■□□ 17.3
RPS3P23396 TGFBI-213ENST00000514554 1691 ntTSL 515.71■□□□□ 0.112e-7■■■□□ 17.3
RPS3P23396 STT3A-216ENST00000534472 1561 ntTSL 1 (best)17.91■□□□□ 0.469e-8■■■□□ 17.3
RPS3P23396 TMED3-204ENST00000543455 1483 ntTSL 218■□□□□ 0.471e-6■■■□□ 17.3
RPS3P23396 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.441e-6■■■□□ 17.3
RPS3P23396 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.75■□□□□ 0.271e-6■■■□□ 17.3
RPS3P23396 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.41□□□□□ -1.381e-6■■■□□ 17.3
RPS3P23396 MIR3652-201ENST00000579335 131 ntBASIC17.23■□□□□ 0.353e-72■■■□□ 17.3
RPS3P23396 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.075e-7■■■□□ 17.3
RPS3P23396 RBBP4-201ENST00000373485 1417 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.965e-7■■■□□ 17.3
RPS3P23396 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC7.81□□□□□ -1.165e-7■■■□□ 17.3
RPS3P23396 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.235e-7■■■□□ 17.3
RPS3P23396 RBBP4-214ENST00000492348 1547 ntTSL 27□□□□□ -1.295e-7■■■□□ 17.3
RPS3P23396 KRT19-202ENST00000455635 641 ntTSL 318.49■□□□□ 0.554e-10■■■□□ 17.3
RPS3P23396 DDX56-202ENST00000415758 1287 ntTSL 514.6□□□□□ -0.072e-6■■■□□ 17.3
RPS3P23396 QPRT-204ENST00000564967 2199 nt13.09□□□□□ -0.316e-8■■■□□ 17.3
RPS3P23396 DHCR7-209ENST00000531364 507 ntTSL 421.35■■□□□ 1.011e-9■■■□□ 17.3
RPS3P23396 DHCR7-208ENST00000529990 525 ntTSL 420.71■□□□□ 0.911e-9■■■□□ 17.3
RPS3P23396 DHCR7-204ENST00000525346 520 ntTSL 416.27■□□□□ 0.21e-9■■■□□ 17.3
RPS3P23396 DHCR7-207ENST00000527452 579 ntTSL 413.86□□□□□ -0.191e-9■■■□□ 17.3
RPS3P23396 MPP1-201ENST00000369531 519 ntTSL 312.57□□□□□ -0.41e-11■■■□□ 17.3
RPS3P23396 MPP1-214ENST00000488694 550 ntTSL 24.84□□□□□ -1.631e-11■■■□□ 17.3
RPS3P23396 GTF3C1-203ENST00000562609 2824 ntTSL 513.6□□□□□ -0.232e-6■■■□□ 17.3
RPS3P23396 YIPF3-206ENST00000460903 605 ntTSL 214.08□□□□□ -0.166e-9■■■□□ 17.3
RPS3P23396 SLC16A3-210ENST00000580189 872 ntTSL 519.05■□□□□ 0.649e-20■■■□□ 17.3
RPS3P23396 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.262e-8■■■□□ 17.3
RPS3P23396 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.312e-8■■■□□ 17.3
RPS3P23396 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.312e-8■■■□□ 17.3
RPS3P23396 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.83e-7■■■□□ 17.3
RPS3P23396 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.493e-7■■■□□ 17.3
RPS3P23396 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.163e-7■■■□□ 17.3
RPS3P23396 TMEM132A-213ENST00000544065 990 ntTSL 223.28■■□□□ 1.326e-8■■■□□ 17.3
RPS3P23396 C3-214ENST00000600763 406 ntTSL 315.2■□□□□ 0.025e-50■■■□□ 17.3
RPS3P23396 ILVBL-213ENST00000599324 568 ntTSL 1 (best)14.03□□□□□ -0.165e-7■■■□□ 17.3
RPS3P23396 SF3A1-202ENST00000411423 548 ntTSL 418.45■□□□□ 0.541e-9■■■□□ 17.3
RPS3P23396 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.331e-9■■■□□ 17.3
RPS3P23396 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.64■■□□□ 1.861e-6■■■□□ 17.3
RPS3P23396 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.181e-6■■■□□ 17.3
RPS3P23396 TMEM132A-211ENST00000540276 514 ntTSL 324.1■■□□□ 1.458e-8■■■□□ 17.3
RPS3P23396 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.482e-9■■■□□ 17.3
RPS3P23396 CAPZA1-205ENST00000485542 739 ntTSL 29.1□□□□□ -0.951e-17■■■□□ 17.3
RPS3P23396 SND1-212ENST00000485871 597 ntTSL 311.21□□□□□ -0.619e-10■■■□□ 17.3
RPS3P23396 CS-207ENST00000547283 555 ntTSL 420.26■□□□□ 0.832e-6■■■□□ 17.3
Retrieved 100 of 24,271 protein–RNA pairs in 238.9 ms