RNA–Protein interactions for RNA: ENST00000460903.2

YIPF3-206, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 605 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-206ENST00000460903 NISCHQ9Y2I1 1504 aa39.48■■■■□ 3.91
YIPF3-206ENST00000460903 ABCC9O60706 1549 aa36.45■■■■□ 3.43
YIPF3-206ENST00000460903 CCDC180Q9P1Z9 1646 aa35.89■■■■□ 3.34
YIPF3-206ENST00000460903 DNAJC5BQ9UF47 199 aa34.84■■■■□ 3.17
YIPF3-206ENST00000460903 RB1CC1Q8TDY2 1594 aa34.4■■■■□ 3.1
YIPF3-206ENST00000460903 NACADO15069 1562 aa33.98■■■■□ 3.03
YIPF3-206ENST00000460903 UNC13AQ9UPW8 1703 aa33.95■■■■□ 3.03
YIPF3-206ENST00000460903 PABPN1Q86U42 306 aaKnown RBP eCLIP33.73■■■□□ 2.99
YIPF3-206ENST00000460903 BICRAQ9NZM4 1560 aa33.54■■■□□ 2.96
YIPF3-206ENST00000460903 DCAF8L2P0C7V8 631 aa33.45■■■□□ 2.95
YIPF3-206ENST00000460903 MYO15BQ96JP2 1530 aa33.23■■■□□ 2.91
YIPF3-206ENST00000460903 CC2D2AQ9P2K1 1620 aa32.99■■■□□ 2.87
YIPF3-206ENST00000460903 CECR2Q9BXF3 1484 aa32.89■■■□□ 2.86
YIPF3-206ENST00000460903 SHROOM4Q9ULL8 1493 aa32.85■■■□□ 2.85
YIPF3-206ENST00000460903 EIF4G1Q04637 1599 aaKnown RBP32.7■■■□□ 2.83
YIPF3-206ENST00000460903 SCRIBQ14160 1630 aa32.59■■■□□ 2.81
YIPF3-206ENST00000460903 ZCCHC6Q5VYS8 1495 aaKnown RBP32.57■■■□□ 2.8
YIPF3-206ENST00000460903 DCAF1Q9Y4B6 1507 aa32.56■■■□□ 2.8
YIPF3-206ENST00000460903 DNAJC5Q9H3Z4 198 aa32.46■■■□□ 2.79
YIPF3-206ENST00000460903 CUX2O14529 1486 aa31.7■■■□□ 2.66
YIPF3-206ENST00000460903 ERCC6Q03468 1493 aa31.46■■■□□ 2.63
YIPF3-206ENST00000460903 NCAPD3P42695 1498 aa31.32■■■□□ 2.6
YIPF3-206ENST00000460903 NESP48681 1621 aa31.16■■■□□ 2.58
YIPF3-206ENST00000460903 ATAD2BQ9ULI0 1458 aa31.14■■■□□ 2.57
YIPF3-206ENST00000460903 HMGXB3Q12766 1538 aa31.09■■■□□ 2.57
YIPF3-206ENST00000460903 THOC2Q8NI27 1593 aaKnown RBP31.08■■■□□ 2.57
YIPF3-206ENST00000460903 SMARCA4P51532 1647 aa31.03■■■□□ 2.56
YIPF3-206ENST00000460903 SMARCA2P51531 1590 aa31.03■■■□□ 2.56
YIPF3-206ENST00000460903 KIF21AQ7Z4S6 1674 aa30.89■■■□□ 2.54
YIPF3-206ENST00000460903 LAMC3Q9Y6N6 1575 aa30.82■■■□□ 2.52
YIPF3-206ENST00000460903 BAZ1BQ9UIG0 1483 aaKnown RBP30.79■■■□□ 2.52
YIPF3-206ENST00000460903 PEG3Q9GZU2 1588 aa30.71■■■□□ 2.51
YIPF3-206ENST00000460903 TRIM41Q8WV44 630 aa30.71■■■□□ 2.51
YIPF3-206ENST00000460903 BAZ1AQ9NRL2 1556 aaPredicted RBP30.68■■■□□ 2.5
YIPF3-206ENST00000460903 PDS5BQ9NTI5 1447 aa30.52■■■□□ 2.48
YIPF3-206ENST00000460903 MROH2BQ7Z745 1585 aa30.44■■■□□ 2.46
YIPF3-206ENST00000460903 WDR62O43379 1518 aa30.4■■■□□ 2.46
YIPF3-206ENST00000460903 MRC2Q9UBG0 1479 aa30.38■■■□□ 2.45
YIPF3-206ENST00000460903 CADPSQ9ULU8 1353 aa30.28■■■□□ 2.44
YIPF3-206ENST00000460903 WIZO95785 1651 aa30.14■■■□□ 2.41
YIPF3-206ENST00000460903 CEP164Q9UPV0 1460 aa30.11■■■□□ 2.41
YIPF3-206ENST00000460903 OSCARQ8IYS5 282 aa30.01■■■□□ 2.39
YIPF3-206ENST00000460903 FANCD2Q9BXW9 1451 aa30■■■□□ 2.39
YIPF3-206ENST00000460903 RIMBP3CA6NJZ7 1639 aa29.96■■■□□ 2.39
YIPF3-206ENST00000460903 RIMBP3BA6NNM3 1639 aa29.96■■■□□ 2.39
YIPF3-206ENST00000460903 RIMBP3Q9UFD9 1639 aa29.96■■■□□ 2.39
YIPF3-206ENST00000460903 URB2Q14146 1524 aaKnown RBP29.86■■■□□ 2.37
YIPF3-206ENST00000460903 CFTRP13569 1480 aa29.84■■■□□ 2.37
YIPF3-206ENST00000460903 PRDM2Q13029 1718 aa29.8■■■□□ 2.36
YIPF3-206ENST00000460903 ARHGEF11O15085 1522 aa29.7■■■□□ 2.34
YIPF3-206ENST00000460903 ZNF608Q9ULD9 1512 aaPredicted RBP29.61■■■□□ 2.33
YIPF3-206ENST00000460903 TOP2AP11388 1531 aaKnown RBP29.6■■■□□ 2.33
YIPF3-206ENST00000460903 CHD1O14646 1710 aa29.52■■■□□ 2.32
YIPF3-206ENST00000460903 IFT140Q96RY7 1462 aa29.5■■■□□ 2.31
YIPF3-206ENST00000460903 EIF4G3O43432 1585 aaKnown RBP29.49■■■□□ 2.31
YIPF3-206ENST00000460903 RSF1Q96T23 1441 aaPredicted RBP29.45■■■□□ 2.31
YIPF3-206ENST00000460903 TOPBP1Q92547 1522 aa29.4■■■□□ 2.3
YIPF3-206ENST00000460903 CYB5RLQ6IPT4 315 aa29.39■■■□□ 2.3
YIPF3-206ENST00000460903 ARAP1Q96P48 1450 aa29.36■■■□□ 2.29
YIPF3-206ENST00000460903 TARBP1Q13395 1621 aaKnown RBP29.28■■■□□ 2.28
YIPF3-206ENST00000460903 TRHP20396 242 aaPredicted RBP29.27■■■□□ 2.28
YIPF3-206ENST00000460903 DNMBPQ6XZF7 1577 aa29.24■■■□□ 2.27
YIPF3-206ENST00000460903 CCDC88BA6NC98 1476 aa29.23■■■□□ 2.27
YIPF3-206ENST00000460903 ABCC8Q09428 1581 aa29.2■■■□□ 2.26
YIPF3-206ENST00000460903 AQRO60306 1485 aaKnown RBP eCLIP29.19■■■□□ 2.262e-9■■□□□ 11.8
YIPF3-206ENST00000460903 POLA1P09884 1462 aaPredicted RBP29.04■■■□□ 2.24
YIPF3-206ENST00000460903 FBLN2P98095 1184 aa29.03■■■□□ 2.24
YIPF3-206ENST00000460903 CLASP1Q7Z460 1538 aa29.02■■■□□ 2.24
YIPF3-206ENST00000460903 RAD54L2Q9Y4B4 1467 aa28.94■■■□□ 2.22
YIPF3-206ENST00000460903 AEBP2Q6ZN18 517 aaPredicted RBP28.93■■■□□ 2.22
YIPF3-206ENST00000460903 SNAPC4Q5SXM2 1469 aa28.9■■■□□ 2.22
YIPF3-206ENST00000460903 SYNJ1O43426 1573 aa28.88■■■□□ 2.21
YIPF3-206ENST00000460903 WDR97A6NE52 1622 aa28.87■■■□□ 2.21
YIPF3-206ENST00000460903 TDRD9Q8NDG6 1382 aaKnown RBP28.86■■■□□ 2.21
YIPF3-206ENST00000460903 SOGA1O94964 1423 aa28.81■■■□□ 2.2
YIPF3-206ENST00000460903 MAGI1Q96QZ7 1491 aaPredicted RBP28.77■■■□□ 2.2
YIPF3-206ENST00000460903 PBRM1Q86U86 1689 aa28.76■■■□□ 2.19
YIPF3-206ENST00000460903 FGD5Q6ZNL6 1462 aa28.75■■■□□ 2.19
YIPF3-206ENST00000460903 CHMP7Q8WUX9 453 aaPredicted RBP28.69■■■□□ 2.18
YIPF3-206ENST00000460903 SYNJ2O15056 1496 aa28.68■■■□□ 2.18
YIPF3-206ENST00000460903 GRIN2BQ13224 1484 aa28.67■■■□□ 2.18
YIPF3-206ENST00000460903 GAPVD1Q14C86 1478 aa28.66■■■□□ 2.18
YIPF3-206ENST00000460903 CUX1P39880 1505 aa28.64■■■□□ 2.18
YIPF3-206ENST00000460903 ERCC6L2Q5T890 1561 aa28.55■■■□□ 2.16
YIPF3-206ENST00000460903 KIF13AQ9H1H9 1805 aa28.53■■■□□ 2.16
YIPF3-206ENST00000460903 ABCA5Q8WWZ7 1642 aa28.51■■■□□ 2.15
YIPF3-206ENST00000460903 CEP170Q5SW79 1584 aa28.39■■■□□ 2.14
YIPF3-206ENST00000460903 SHROOM2Q13796 1616 aa28.36■■■□□ 2.13
YIPF3-206ENST00000460903 ABCA10Q8WWZ4 1543 aa28.36■■■□□ 2.13
YIPF3-206ENST00000460903 GRIN2AQ12879 1464 aa28.34■■■□□ 2.13
YIPF3-206ENST00000460903 ADAMTS12P58397 1594 aa28.32■■■□□ 2.12
YIPF3-206ENST00000460903 NUP160Q12769 1436 aa28.26■■■□□ 2.12
YIPF3-206ENST00000460903 BIVM-ERCC5R4GMW8 1640 aa28.08■■■□□ 2.09
YIPF3-206ENST00000460903 FHAD1B1AJZ9 1412 aa28.06■■■□□ 2.08
YIPF3-206ENST00000460903 DIP2BQ9P265 1576 aa28.03■■■□□ 2.08
YIPF3-206ENST00000460903 WRNQ14191 1432 aaPredicted RBP eCLIP28.02■■■□□ 2.08
YIPF3-206ENST00000460903 TSPOAP1O95153 1857 aa28.02■■■□□ 2.08
YIPF3-206ENST00000460903 ABCC10Q5T3U5 1492 aa28.02■■■□□ 2.08
YIPF3-206ENST00000460903 PRG4Q92954 1404 aaPredicted RBP28.01■■■□□ 2.07
YIPF3-206ENST00000460903 TOP2BQ02880 1626 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms