RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 NISCHQ9Y2I1 1504 aa46.42■■■■■ 5.02
SNX17-206ENST00000484886 CCDC180Q9P1Z9 1646 aa41.32■■■■■ 4.2
SNX17-206ENST00000484886 ABCC9O60706 1549 aa40.55■■■■■ 4.08
SNX17-206ENST00000484886 DCAF8L2P0C7V8 631 aa38.97■■■■□ 3.83
SNX17-206ENST00000484886 RB1CC1Q8TDY2 1594 aa38.95■■■■□ 3.83
SNX17-206ENST00000484886 NACADO15069 1562 aa38.85■■■■□ 3.81
SNX17-206ENST00000484886 ZCCHC6Q5VYS8 1495 aaKnown RBP38.65■■■■□ 3.78
SNX17-206ENST00000484886 MYO15BQ96JP2 1530 aa38.52■■■■□ 3.76
SNX17-206ENST00000484886 DCAF1Q9Y4B6 1507 aa38.35■■■■□ 3.73
SNX17-206ENST00000484886 UNC13AQ9UPW8 1703 aa38.05■■■■□ 3.68
SNX17-206ENST00000484886 PABPN1Q86U42 306 aaKnown RBP eCLIP37.88■■■■□ 3.65
SNX17-206ENST00000484886 SCRIBQ14160 1630 aa37.77■■■■□ 3.64
SNX17-206ENST00000484886 BICRAQ9NZM4 1560 aa37.71■■■■□ 3.63
SNX17-206ENST00000484886 SHROOM4Q9ULL8 1493 aa37.29■■■■□ 3.56
SNX17-206ENST00000484886 DNAJC5BQ9UF47 199 aa37.19■■■■□ 3.54
SNX17-206ENST00000484886 EIF4G1Q04637 1599 aaKnown RBP36.76■■■■□ 3.48
SNX17-206ENST00000484886 CC2D2AQ9P2K1 1620 aa36.64■■■■□ 3.46
SNX17-206ENST00000484886 CECR2Q9BXF3 1484 aa36.43■■■■□ 3.42
SNX17-206ENST00000484886 SMARCA4P51532 1647 aa36.06■■■■□ 3.36
SNX17-206ENST00000484886 BAZ1AQ9NRL2 1556 aaPredicted RBP36.01■■■■□ 3.35
SNX17-206ENST00000484886 ATAD2BQ9ULI0 1458 aa35.86■■■■□ 3.33
SNX17-206ENST00000484886 SMARCA2P51531 1590 aa35.85■■■■□ 3.33
SNX17-206ENST00000484886 NCAPD3P42695 1498 aa35.81■■■■□ 3.32
SNX17-206ENST00000484886 MROH2BQ7Z745 1585 aa35.79■■■■□ 3.32
SNX17-206ENST00000484886 HMGXB3Q12766 1538 aa35.67■■■■□ 3.3
SNX17-206ENST00000484886 PEG3Q9GZU2 1588 aa35.64■■■■□ 3.3
SNX17-206ENST00000484886 BAZ1BQ9UIG0 1483 aaKnown RBP35.62■■■■□ 3.29
SNX17-206ENST00000484886 WIZO95785 1651 aa35.43■■■■□ 3.26
SNX17-206ENST00000484886 RSF1Q96T23 1441 aaPredicted RBP35.34■■■■□ 3.25
SNX17-206ENST00000484886 NESP48681 1621 aa35.04■■■■□ 3.2
SNX17-206ENST00000484886 TOP2AP11388 1531 aaKnown RBP35.04■■■■□ 3.2
SNX17-206ENST00000484886 ERCC6Q03468 1493 aa35■■■■□ 3.19
SNX17-206ENST00000484886 LAMC3Q9Y6N6 1575 aa34.93■■■■□ 3.18
SNX17-206ENST00000484886 CADPSQ9ULU8 1353 aa34.8■■■■□ 3.16
SNX17-206ENST00000484886 PDS5BQ9NTI5 1447 aa34.72■■■■□ 3.15
SNX17-206ENST00000484886 KIF21AQ7Z4S6 1674 aa34.66■■■■□ 3.14
SNX17-206ENST00000484886 CCDC88BA6NC98 1476 aa34.62■■■■□ 3.13
SNX17-206ENST00000484886 CUX2O14529 1486 aa34.56■■■■□ 3.12
SNX17-206ENST00000484886 CFTRP13569 1480 aa34.56■■■■□ 3.12
SNX17-206ENST00000484886 SUPT5HO00267 1087 aaKnown RBP34.53■■■■□ 3.12
SNX17-206ENST00000484886 THOC2Q8NI27 1593 aaKnown RBP34.51■■■■□ 3.12
SNX17-206ENST00000484886 FANCD2Q9BXW9 1451 aa34.44■■■■□ 3.1
SNX17-206ENST00000484886 CEP164Q9UPV0 1460 aa34.42■■■■□ 3.1
SNX17-206ENST00000484886 MRC2Q9UBG0 1479 aa34.37■■■■□ 3.09
SNX17-206ENST00000484886 PRDM2Q13029 1718 aa34.36■■■■□ 3.09
SNX17-206ENST00000484886 WDR62O43379 1518 aa34.22■■■■□ 3.07
SNX17-206ENST00000484886 URB2Q14146 1524 aaKnown RBP34.08■■■■□ 3.05
SNX17-206ENST00000484886 TOPBP1Q92547 1522 aa33.87■■■■□ 3.01
SNX17-206ENST00000484886 ABCC8Q09428 1581 aa33.85■■■■□ 3.01
SNX17-206ENST00000484886 DNMBPQ6XZF7 1577 aa33.84■■■■□ 3.01
SNX17-206ENST00000484886 IFT140Q96RY7 1462 aa33.67■■■□□ 2.98
SNX17-206ENST00000484886 CUX1P39880 1505 aa33.58■■■□□ 2.97
SNX17-206ENST00000484886 POLA1P09884 1462 aaPredicted RBP33.57■■■□□ 2.97
SNX17-206ENST00000484886 DNAJC5Q9H3Z4 198 aa33.56■■■□□ 2.96
SNX17-206ENST00000484886 ZNF608Q9ULD9 1512 aaPredicted RBP33.53■■■□□ 2.96
SNX17-206ENST00000484886 FGD5Q6ZNL6 1462 aa33.5■■■□□ 2.95
SNX17-206ENST00000484886 TARBP1Q13395 1621 aaKnown RBP33.48■■■□□ 2.95
SNX17-206ENST00000484886 SOGA1O94964 1423 aa33.45■■■□□ 2.95
SNX17-206ENST00000484886 RAD54L2Q9Y4B4 1467 aa33.45■■■□□ 2.95
SNX17-206ENST00000484886 EIF4G3O43432 1585 aaKnown RBP33.43■■■□□ 2.94
SNX17-206ENST00000484886 WRNQ14191 1432 aaPredicted RBP eCLIP33.36■■■□□ 2.93
SNX17-206ENST00000484886 AQRO60306 1485 aaKnown RBP eCLIP33.35■■■□□ 2.93
SNX17-206ENST00000484886 SYNJ1O43426 1573 aa33.29■■■□□ 2.92
SNX17-206ENST00000484886 TOP2BQ02880 1626 aa33.28■■■□□ 2.92
SNX17-206ENST00000484886 TDRD9Q8NDG6 1382 aaKnown RBP33.28■■■□□ 2.92
SNX17-206ENST00000484886 BIVM-ERCC5R4GMW8 1640 aa33.28■■■□□ 2.92
SNX17-206ENST00000484886 WDR97A6NE52 1622 aa33.2■■■□□ 2.91
SNX17-206ENST00000484886 OSCARQ8IYS5 282 aa33.15■■■□□ 2.9
SNX17-206ENST00000484886 ABCA10Q8WWZ4 1543 aa33.14■■■□□ 2.9
SNX17-206ENST00000484886 GRIN2BQ13224 1484 aa33.06■■■□□ 2.88
SNX17-206ENST00000484886 GAPVD1Q14C86 1478 aa33.06■■■□□ 2.88
SNX17-206ENST00000484886 FBLN2P98095 1184 aa33.05■■■□□ 2.88
SNX17-206ENST00000484886 SNAPC4Q5SXM2 1469 aa33.05■■■□□ 2.88
SNX17-206ENST00000484886 PBRM1Q86U86 1689 aa33.04■■■□□ 2.88
SNX17-206ENST00000484886 CHD1O14646 1710 aa33.03■■■□□ 2.88
SNX17-206ENST00000484886 ABCA5Q8WWZ7 1642 aa33.02■■■□□ 2.88
SNX17-206ENST00000484886 MAGI1Q96QZ7 1491 aaPredicted RBP32.98■■■□□ 2.87
SNX17-206ENST00000484886 CHMP7Q8WUX9 453 aaPredicted RBP32.9■■■□□ 2.86
SNX17-206ENST00000484886 SYNJ2O15056 1496 aa32.86■■■□□ 2.85
SNX17-206ENST00000484886 ERICH3Q5RHP9 1530 aa32.76■■■□□ 2.83
SNX17-206ENST00000484886 ADAMTS12P58397 1594 aa32.74■■■□□ 2.83
SNX17-206ENST00000484886 KIF27Q86VH2 1401 aa32.68■■■□□ 2.82
SNX17-206ENST00000484886 FHAD1B1AJZ9 1412 aa32.67■■■□□ 2.82
SNX17-206ENST00000484886 GRIN2AQ12879 1464 aa32.64■■■□□ 2.82
SNX17-206ENST00000484886 RIMBP3CA6NJZ7 1639 aa32.63■■■□□ 2.81
SNX17-206ENST00000484886 RIMBP3BA6NNM3 1639 aa32.63■■■□□ 2.81
SNX17-206ENST00000484886 RIMBP3Q9UFD9 1639 aa32.63■■■□□ 2.81
SNX17-206ENST00000484886 CLASP1Q7Z460 1538 aa32.61■■■□□ 2.81
SNX17-206ENST00000484886 ARHGEF11O15085 1522 aa32.6■■■□□ 2.81
SNX17-206ENST00000484886 TRIM41Q8WV44 630 aa32.59■■■□□ 2.81
SNX17-206ENST00000484886 IGF1RP08069 1367 aa32.5■■■□□ 2.79
SNX17-206ENST00000484886 CUL7Q14999 1698 aa32.48■■■□□ 2.79
SNX17-206ENST00000484886 CEP170Q5SW79 1584 aa32.48■■■□□ 2.79
SNX17-206ENST00000484886 NUP160Q12769 1436 aa32.45■■■□□ 2.79
SNX17-206ENST00000484886 CARMIL1Q5VZK9 1371 aa32.35■■■□□ 2.77
SNX17-206ENST00000484886 CYB5RLQ6IPT4 315 aa32.34■■■□□ 2.77
SNX17-206ENST00000484886 RUSC2Q8N2Y8 1516 aa32.34■■■□□ 2.77
SNX17-206ENST00000484886 ARAP1Q96P48 1450 aa32.33■■■□□ 2.77
SNX17-206ENST00000484886 SHROOM2Q13796 1616 aa32.22■■■□□ 2.75
SNX17-206ENST00000484886 ERCC6L2Q5T890 1561 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms