RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 NISCHQ9Y2I1 1504 aa35.26■■■■□ 3.23
POLR2A-201ENST00000572844 CCDC180Q9P1Z9 1646 aa30.46■■■□□ 2.47
POLR2A-201ENST00000572844 ZCCHC6Q5VYS8 1495 aaKnown RBP29.77■■■□□ 2.36
POLR2A-201ENST00000572844 DCAF1Q9Y4B6 1507 aa29.2■■■□□ 2.26
POLR2A-201ENST00000572844 SHROOM4Q9ULL8 1493 aa29.18■■■□□ 2.26
POLR2A-201ENST00000572844 DCAF8L2P0C7V8 631 aa28.76■■■□□ 2.19
POLR2A-201ENST00000572844 MYO15BQ96JP2 1530 aa28.58■■■□□ 2.17
POLR2A-201ENST00000572844 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
POLR2A-201ENST00000572844 NACADO15069 1562 aa28.16■■■□□ 2.1
POLR2A-201ENST00000572844 ABCC9O60706 1549 aa28.05■■■□□ 2.08
POLR2A-201ENST00000572844 SCRIBQ14160 1630 aa28.05■■■□□ 2.08
POLR2A-201ENST00000572844 RB1CC1Q8TDY2 1594 aa27.74■■■□□ 2.03
POLR2A-201ENST00000572844 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
POLR2A-201ENST00000572844 RSF1Q96T23 1441 aaPredicted RBP27.62■■■□□ 2.01
POLR2A-201ENST00000572844 CECR2Q9BXF3 1484 aa27.32■■□□□ 1.96
POLR2A-201ENST00000572844 UNC13AQ9UPW8 1703 aa27.3■■□□□ 1.96
POLR2A-201ENST00000572844 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.95
POLR2A-201ENST00000572844 BAZ1AQ9NRL2 1556 aaPredicted RBP27.17■■□□□ 1.94
POLR2A-201ENST00000572844 WIZO95785 1651 aa27.1■■□□□ 1.93
POLR2A-201ENST00000572844 SMARCA4P51532 1647 aa26.97■■□□□ 1.91
POLR2A-201ENST00000572844 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
POLR2A-201ENST00000572844 TOP2AP11388 1531 aaKnown RBP26.83■■□□□ 1.89
POLR2A-201ENST00000572844 EIF4G1Q04637 1599 aaKnown RBP26.72■■□□□ 1.87
POLR2A-201ENST00000572844 TRIM41Q8WV44 630 aa26.71■■□□□ 1.87
POLR2A-201ENST00000572844 PEG3Q9GZU2 1588 aa26.63■■□□□ 1.85
POLR2A-201ENST00000572844 SMARCA2P51531 1590 aa26.61■■□□□ 1.85
POLR2A-201ENST00000572844 LOC105371045A0A1W2PR82 267 aa26.6■■□□□ 1.85
POLR2A-201ENST00000572844 PABPN1Q86U42 306 aaKnown RBP eCLIP26.58■■□□□ 1.84
POLR2A-201ENST00000572844 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
POLR2A-201ENST00000572844 ATAD2BQ9ULI0 1458 aa26.31■■□□□ 1.8
POLR2A-201ENST00000572844 ABCC8Q09428 1581 aa26.22■■□□□ 1.79
POLR2A-201ENST00000572844 FAM9AQ8IZU1 332 aaPredicted RBP26.21■■□□□ 1.79
POLR2A-201ENST00000572844 BAZ1BQ9UIG0 1483 aaKnown RBP26.2■■□□□ 1.78
POLR2A-201ENST00000572844 PCGF6Q9BYE7 350 aa26.14■■□□□ 1.77
POLR2A-201ENST00000572844 HRCP23327 699 aa26.03■■□□□ 1.76
POLR2A-201ENST00000572844 HMGXB3Q12766 1538 aa26.02■■□□□ 1.76
POLR2A-201ENST00000572844 TRIM26Q12899 539 aaPredicted RBP26.01■■□□□ 1.75
POLR2A-201ENST00000572844 EEA1Q15075 1411 aa26.01■■□□□ 1.75
POLR2A-201ENST00000572844 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
POLR2A-201ENST00000572844 WRNQ14191 1432 aaPredicted RBP eCLIP25.96■■□□□ 1.75
POLR2A-201ENST00000572844 SOGA1O94964 1423 aa25.86■■□□□ 1.73
POLR2A-201ENST00000572844 SYNJ1O43426 1573 aa25.86■■□□□ 1.73
POLR2A-201ENST00000572844 EHMT2Q96KQ7 1210 aa25.76■■□□□ 1.71
POLR2A-201ENST00000572844 CSRNP3Q8WYN3 585 aa25.75■■□□□ 1.71
POLR2A-201ENST00000572844 RUSC2Q8N2Y8 1516 aa25.73■■□□□ 1.71
POLR2A-201ENST00000572844 TNIKQ9UKE5 1360 aa25.73■■□□□ 1.71
POLR2A-201ENST00000572844 TOP2BQ02880 1626 aa25.72■■□□□ 1.71
POLR2A-201ENST00000572844 BIVM-ERCC5R4GMW8 1640 aa25.7■■□□□ 1.7
POLR2A-201ENST00000572844 GOLGA3Q08378 1498 aa25.66■■□□□ 1.7
POLR2A-201ENST00000572844 KIF21BO75037 1637 aa25.66■■□□□ 1.7
POLR2A-201ENST00000572844 CEP162Q5TB80 1403 aa25.62■■□□□ 1.69
POLR2A-201ENST00000572844 PRDM2Q13029 1718 aa25.61■■□□□ 1.69
POLR2A-201ENST00000572844 CFTRP13569 1480 aa25.6■■□□□ 1.69
POLR2A-201ENST00000572844 CEP164Q9UPV0 1460 aa25.59■■□□□ 1.69
POLR2A-201ENST00000572844 CC2D2AQ9P2K1 1620 aa25.46■■□□□ 1.67
POLR2A-201ENST00000572844 CUX1P39880 1505 aa25.44■■□□□ 1.66
POLR2A-201ENST00000572844 UBTFP17480 764 aaKnown RBP25.44■■□□□ 1.66
POLR2A-201ENST00000572844 ZEB1P37275 1124 aaPredicted RBP25.38■■□□□ 1.65
POLR2A-201ENST00000572844 ERICH3Q5RHP9 1530 aa25.34■■□□□ 1.65
POLR2A-201ENST00000572844 CADPSQ9ULU8 1353 aa25.34■■□□□ 1.65
POLR2A-201ENST00000572844 RAPGEF2Q9Y4G8 1499 aa25.31■■□□□ 1.64
POLR2A-201ENST00000572844 PRXQ9BXM0 1461 aa25.28■■□□□ 1.64
POLR2A-201ENST00000572844 PPARGC1BQ86YN6 1023 aaKnown RBP25.26■■□□□ 1.63
POLR2A-201ENST00000572844 CLIP1P30622 1438 aa25.26■■□□□ 1.63
POLR2A-201ENST00000572844 KIF27Q86VH2 1401 aa25.25■■□□□ 1.63
POLR2A-201ENST00000572844 VPS8Q8N3P4 1428 aa25.16■■□□□ 1.62
POLR2A-201ENST00000572844 FANCD2Q9BXW9 1451 aa25.06■■□□□ 1.6
POLR2A-201ENST00000572844 FGD5Q6ZNL6 1462 aa25.04■■□□□ 1.6
POLR2A-201ENST00000572844 DNMBPQ6XZF7 1577 aa25.01■■□□□ 1.59
POLR2A-201ENST00000572844 CUX2O14529 1486 aa25■■□□□ 1.59
POLR2A-201ENST00000572844 LAMC3Q9Y6N6 1575 aa24.99■■□□□ 1.59
POLR2A-201ENST00000572844 ARAP1Q96P48 1450 aa24.94■■□□□ 1.58
POLR2A-201ENST00000572844 IGF1RP08069 1367 aa24.94■■□□□ 1.58
POLR2A-201ENST00000572844 TOPBP1Q92547 1522 aa24.89■■□□□ 1.58
POLR2A-201ENST00000572844 APLP2Q06481 763 aa24.87■■□□□ 1.57
POLR2A-201ENST00000572844 NESP48681 1621 aa24.87■■□□□ 1.57
POLR2A-201ENST00000572844 TTBK1Q5TCY1 1321 aaPredicted RBP24.87■■□□□ 1.57
POLR2A-201ENST00000572844 ABCA10Q8WWZ4 1543 aa24.86■■□□□ 1.57
POLR2A-201ENST00000572844 CARMIL1Q5VZK9 1371 aa24.82■■□□□ 1.56
POLR2A-201ENST00000572844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.82■■□□□ 1.56
POLR2A-201ENST00000572844 POLA1P09884 1462 aaPredicted RBP24.81■■□□□ 1.56
POLR2A-201ENST00000572844 CCER1Q8TC90 406 aaPredicted RBP24.81■■□□□ 1.56
POLR2A-201ENST00000572844 ARHGAP35Q9NRY4 1499 aa24.8■■□□□ 1.56
POLR2A-201ENST00000572844 DNAJC5BQ9UF47 199 aa24.79■■□□□ 1.56
POLR2A-201ENST00000572844 RANGAP1P46060 587 aaPredicted RBP24.76■■□□□ 1.55
POLR2A-201ENST00000572844 WDR97A6NE52 1622 aa24.76■■□□□ 1.55
POLR2A-201ENST00000572844 CUL7Q14999 1698 aa24.75■■□□□ 1.55
POLR2A-201ENST00000572844 PDS5BQ9NTI5 1447 aa24.73■■□□□ 1.55
POLR2A-201ENST00000572844 URB2Q14146 1524 aaKnown RBP24.73■■□□□ 1.55
POLR2A-201ENST00000572844 RAD54L2Q9Y4B4 1467 aa24.72■■□□□ 1.55
POLR2A-201ENST00000572844 MAP3K1Q13233 1512 aa24.65■■□□□ 1.54
POLR2A-201ENST00000572844 KIF21AQ7Z4S6 1674 aa24.64■■□□□ 1.54
POLR2A-201ENST00000572844 ABCA5Q8WWZ7 1642 aa24.62■■□□□ 1.53
POLR2A-201ENST00000572844 CTTNBP2Q8WZ74 1663 aa24.6■■□□□ 1.53
POLR2A-201ENST00000572844 EFCAB5A4FU69 1503 aa24.56■■□□□ 1.52
POLR2A-201ENST00000572844 RRBP1Q9P2E9 1410 aaKnown RBP24.55■■□□□ 1.52
POLR2A-201ENST00000572844 KANK4Q5T7N3 995 aaPredicted RBP24.54■■□□□ 1.52
POLR2A-201ENST00000572844 TIAM1Q13009 1591 aa24.53■■□□□ 1.52
POLR2A-201ENST00000572844 FHAD1B1AJZ9 1412 aa24.53■■□□□ 1.52
POLR2A-201ENST00000572844 HNRNPUL2Q1KMD3 747 aaKnown RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms