RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 NISCHQ9Y2I1 1504 aa34.73■■■■□ 3.15
CTSB-203ENST00000420692 CCDC180Q9P1Z9 1646 aa29.73■■■□□ 2.35
CTSB-203ENST00000420692 ZCCHC6Q5VYS8 1495 aaKnown RBP29.32■■■□□ 2.28
CTSB-203ENST00000420692 SHROOM4Q9ULL8 1493 aa29.17■■■□□ 2.26
CTSB-203ENST00000420692 DCAF8L2P0C7V8 631 aa28.63■■■□□ 2.17
CTSB-203ENST00000420692 DCAF1Q9Y4B6 1507 aa28.56■■■□□ 2.16
CTSB-203ENST00000420692 SUPT5HO00267 1087 aaKnown RBP28.43■■■□□ 2.14
CTSB-203ENST00000420692 MYO15BQ96JP2 1530 aa27.87■■■□□ 2.05
CTSB-203ENST00000420692 SCRIBQ14160 1630 aa27.7■■■□□ 2.02
CTSB-203ENST00000420692 ABCC9O60706 1549 aa27.68■■■□□ 2.02
CTSB-203ENST00000420692 CHIC1Q5VXU3 224 aa27.6■■■□□ 2.01
CTSB-203ENST00000420692 NACADO15069 1562 aa27.53■■■□□ 2
CTSB-203ENST00000420692 RSF1Q96T23 1441 aaPredicted RBP27.34■■□□□ 1.97
CTSB-203ENST00000420692 RB1CC1Q8TDY2 1594 aa27.11■■□□□ 1.93
CTSB-203ENST00000420692 CECR2Q9BXF3 1484 aa27.09■■□□□ 1.93
CTSB-203ENST00000420692 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
CTSB-203ENST00000420692 WIZO95785 1651 aa26.8■■□□□ 1.88
CTSB-203ENST00000420692 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
CTSB-203ENST00000420692 LOC105371045A0A1W2PR82 267 aa26.72■■□□□ 1.87
CTSB-203ENST00000420692 BAZ1AQ9NRL2 1556 aaPredicted RBP26.67■■□□□ 1.86
CTSB-203ENST00000420692 TRIM41Q8WV44 630 aa26.54■■□□□ 1.84
CTSB-203ENST00000420692 SMARCA4P51532 1647 aa26.52■■□□□ 1.84
CTSB-203ENST00000420692 BICRAQ9NZM4 1560 aa26.48■■□□□ 1.83
CTSB-203ENST00000420692 TOP2AP11388 1531 aaKnown RBP26.38■■□□□ 1.81
CTSB-203ENST00000420692 EIF4G1Q04637 1599 aaKnown RBP26.38■■□□□ 1.81
CTSB-203ENST00000420692 PABPN1Q86U42 306 aaKnown RBP eCLIP26.38■■□□□ 1.81
CTSB-203ENST00000420692 PCGF6Q9BYE7 350 aa26.27■■□□□ 1.8
CTSB-203ENST00000420692 CCDC88BA6NC98 1476 aa26.26■■□□□ 1.79
CTSB-203ENST00000420692 FAM9AQ8IZU1 332 aaPredicted RBP26.25■■□□□ 1.79
CTSB-203ENST00000420692 SMARCA2P51531 1590 aa26.25■■□□□ 1.79
CTSB-203ENST00000420692 HRCP23327 699 aa26.11■■□□□ 1.77
CTSB-203ENST00000420692 PEG3Q9GZU2 1588 aa26.09■■□□□ 1.77
CTSB-203ENST00000420692 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
CTSB-203ENST00000420692 EHMT2Q96KQ7 1210 aa25.96■■□□□ 1.75
CTSB-203ENST00000420692 TRIM26Q12899 539 aaPredicted RBP25.91■■□□□ 1.74
CTSB-203ENST00000420692 ATAD2BQ9ULI0 1458 aa25.91■■□□□ 1.74
CTSB-203ENST00000420692 BAZ1BQ9UIG0 1483 aaKnown RBP25.76■■□□□ 1.71
CTSB-203ENST00000420692 SOGA1O94964 1423 aa25.73■■□□□ 1.71
CTSB-203ENST00000420692 RUSC2Q8N2Y8 1516 aa25.65■■□□□ 1.7
CTSB-203ENST00000420692 WRNQ14191 1432 aaPredicted RBP eCLIP25.64■■□□□ 1.69
CTSB-203ENST00000420692 PPARGC1BQ86YN6 1023 aaKnown RBP25.6■■□□□ 1.69
CTSB-203ENST00000420692 SYNJ1O43426 1573 aa25.57■■□□□ 1.68
CTSB-203ENST00000420692 EEA1Q15075 1411 aa25.54■■□□□ 1.68
CTSB-203ENST00000420692 CSRNP3Q8WYN3 585 aa25.52■■□□□ 1.68
CTSB-203ENST00000420692 NCAPD3P42695 1498 aa25.49■■□□□ 1.67
CTSB-203ENST00000420692 HMGXB3Q12766 1538 aa25.45■■□□□ 1.67
CTSB-203ENST00000420692 TNIKQ9UKE5 1360 aa25.45■■□□□ 1.66
CTSB-203ENST00000420692 CEP162Q5TB80 1403 aa25.43■■□□□ 1.66
CTSB-203ENST00000420692 GOLGA3Q08378 1498 aa25.33■■□□□ 1.65
CTSB-203ENST00000420692 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
CTSB-203ENST00000420692 UBTFP17480 764 aaKnown RBP25.29■■□□□ 1.64
CTSB-203ENST00000420692 KIF21BO75037 1637 aa25.25■■□□□ 1.63
CTSB-203ENST00000420692 BIVM-ERCC5R4GMW8 1640 aa25.24■■□□□ 1.63
CTSB-203ENST00000420692 CEP164Q9UPV0 1460 aa25.23■■□□□ 1.63
CTSB-203ENST00000420692 CFTRP13569 1480 aa25.18■■□□□ 1.62
CTSB-203ENST00000420692 ZEB1P37275 1124 aaPredicted RBP25.14■■□□□ 1.62
CTSB-203ENST00000420692 CUX1P39880 1505 aa25.13■■□□□ 1.61
CTSB-203ENST00000420692 RAPGEF2Q9Y4G8 1499 aa25.12■■□□□ 1.61
CTSB-203ENST00000420692 TTBK1Q5TCY1 1321 aaPredicted RBP25.05■■□□□ 1.6
CTSB-203ENST00000420692 CLIP1P30622 1438 aa25.02■■□□□ 1.6
CTSB-203ENST00000420692 CC2D2AQ9P2K1 1620 aa24.99■■□□□ 1.59
CTSB-203ENST00000420692 PRDM2Q13029 1718 aa24.99■■□□□ 1.59
CTSB-203ENST00000420692 PRXQ9BXM0 1461 aa24.97■■□□□ 1.59
CTSB-203ENST00000420692 CADPSQ9ULU8 1353 aa24.93■■□□□ 1.58
CTSB-203ENST00000420692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.92■■□□□ 1.58
CTSB-203ENST00000420692 ERICH3Q5RHP9 1530 aa24.91■■□□□ 1.58
CTSB-203ENST00000420692 VPS8Q8N3P4 1428 aa24.89■■□□□ 1.57
CTSB-203ENST00000420692 KIF27Q86VH2 1401 aa24.86■■□□□ 1.57
CTSB-203ENST00000420692 RANGAP1P46060 587 aaPredicted RBP24.81■■□□□ 1.56
CTSB-203ENST00000420692 CCER1Q8TC90 406 aaPredicted RBP24.78■■□□□ 1.56
CTSB-203ENST00000420692 ARAP1Q96P48 1450 aa24.72■■□□□ 1.55
CTSB-203ENST00000420692 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.54
CTSB-203ENST00000420692 CUX2O14529 1486 aa24.69■■□□□ 1.54
CTSB-203ENST00000420692 IGF1RP08069 1367 aa24.69■■□□□ 1.54
CTSB-203ENST00000420692 FANCD2Q9BXW9 1451 aa24.67■■□□□ 1.54
CTSB-203ENST00000420692 NESP48681 1621 aa24.62■■□□□ 1.53
CTSB-203ENST00000420692 APLP2Q06481 763 aa24.59■■□□□ 1.53
CTSB-203ENST00000420692 ARHGAP35Q9NRY4 1499 aa24.56■■□□□ 1.52
CTSB-203ENST00000420692 DNMBPQ6XZF7 1577 aa24.53■■□□□ 1.52
CTSB-203ENST00000420692 HNRNPUL2Q1KMD3 747 aaKnown RBP24.53■■□□□ 1.52
CTSB-203ENST00000420692 CARMIL1Q5VZK9 1371 aa24.52■■□□□ 1.52
CTSB-203ENST00000420692 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
CTSB-203ENST00000420692 KANK4Q5T7N3 995 aaPredicted RBP24.5■■□□□ 1.51
CTSB-203ENST00000420692 RAD54L2Q9Y4B4 1467 aa24.49■■□□□ 1.51
CTSB-203ENST00000420692 DNAJC5BQ9UF47 199 aa24.47■■□□□ 1.51
CTSB-203ENST00000420692 POLA1P09884 1462 aaPredicted RBP24.46■■□□□ 1.51
CTSB-203ENST00000420692 ABCA10Q8WWZ4 1543 aa24.44■■□□□ 1.5
CTSB-203ENST00000420692 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
CTSB-203ENST00000420692 URB2Q14146 1524 aaKnown RBP24.38■■□□□ 1.49
CTSB-203ENST00000420692 WDR97A6NE52 1622 aa24.29■■□□□ 1.48
CTSB-203ENST00000420692 RRBP1Q9P2E9 1410 aaKnown RBP24.29■■□□□ 1.48
CTSB-203ENST00000420692 CUL7Q14999 1698 aa24.23■■□□□ 1.47
CTSB-203ENST00000420692 PDS5BQ9NTI5 1447 aa24.23■■□□□ 1.47
CTSB-203ENST00000420692 TIAM1Q13009 1591 aa24.22■■□□□ 1.47
CTSB-203ENST00000420692 MAP3K1Q13233 1512 aa24.22■■□□□ 1.47
CTSB-203ENST00000420692 KIF21AQ7Z4S6 1674 aa24.22■■□□□ 1.47
CTSB-203ENST00000420692 ABCA5Q8WWZ7 1642 aa24.18■■□□□ 1.46
CTSB-203ENST00000420692 TDRD9Q8NDG6 1382 aaKnown RBP24.18■■□□□ 1.46
CTSB-203ENST00000420692 P3H3Q8IVL6 736 aa24.17■■□□□ 1.46
CTSB-203ENST00000420692 CCNB3Q8WWL7 1395 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms