RNA–Protein interactions for RNA: ENST00000546253.5

SLC3A2-222, Transcript of solute carrier family 3 member 2, humanhuman

TSL 4

Gene SLC3A2, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-222ENST00000546253 NISCHQ9Y2I1 1504 aa38.02■■■■□ 3.68
SLC3A2-222ENST00000546253 ABCC9O60706 1549 aa34.93■■■■□ 3.18
SLC3A2-222ENST00000546253 CCDC180Q9P1Z9 1646 aa34.37■■■■□ 3.09
SLC3A2-222ENST00000546253 DNAJC5BQ9UF47 199 aa33.15■■■□□ 2.9
SLC3A2-222ENST00000546253 RB1CC1Q8TDY2 1594 aa33.03■■■□□ 2.88
SLC3A2-222ENST00000546253 NACADO15069 1562 aa32.65■■■□□ 2.82
SLC3A2-222ENST00000546253 DCAF8L2P0C7V8 631 aa32.43■■■□□ 2.78
SLC3A2-222ENST00000546253 PABPN1Q86U42 306 aaKnown RBP eCLIP32.42■■■□□ 2.78
SLC3A2-222ENST00000546253 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
SLC3A2-222ENST00000546253 MYO15BQ96JP2 1530 aa32■■■□□ 2.71
SLC3A2-222ENST00000546253 BICRAQ9NZM4 1560 aa31.97■■■□□ 2.71
SLC3A2-222ENST00000546253 SHROOM4Q9ULL8 1493 aa31.63■■■□□ 2.65
SLC3A2-222ENST00000546253 CECR2Q9BXF3 1484 aa31.54■■■□□ 2.64
SLC3A2-222ENST00000546253 CC2D2AQ9P2K1 1620 aa31.49■■■□□ 2.63
SLC3A2-222ENST00000546253 ZCCHC6Q5VYS8 1495 aaKnown RBP31.39■■■□□ 2.62
SLC3A2-222ENST00000546253 DCAF1Q9Y4B6 1507 aa31.38■■■□□ 2.61
SLC3A2-222ENST00000546253 EIF4G1Q04637 1599 aaKnown RBP31.3■■■□□ 2.6
SLC3A2-222ENST00000546253 SCRIBQ14160 1630 aa31.29■■■□□ 2.6
SLC3A2-222ENST00000546253 DNAJC5Q9H3Z4 198 aa30.95■■■□□ 2.55
SLC3A2-222ENST00000546253 CUX2O14529 1486 aa30.38■■■□□ 2.45
SLC3A2-222ENST00000546253 ERCC6Q03468 1493 aa30.29■■■□□ 2.44
SLC3A2-222ENST00000546253 NCAPD3P42695 1498 aa30.12■■■□□ 2.41
SLC3A2-222ENST00000546253 ATAD2BQ9ULI0 1458 aa29.95■■■□□ 2.39
SLC3A2-222ENST00000546253 SMARCA2P51531 1590 aa29.9■■■□□ 2.38
SLC3A2-222ENST00000546253 HMGXB3Q12766 1538 aa29.87■■■□□ 2.37
SLC3A2-222ENST00000546253 NESP48681 1621 aa29.8■■■□□ 2.36
SLC3A2-222ENST00000546253 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
SLC3A2-222ENST00000546253 BAZ1BQ9UIG0 1483 aaKnown RBP29.69■■■□□ 2.34
SLC3A2-222ENST00000546253 THOC2Q8NI27 1593 aaKnown RBP29.62■■■□□ 2.33
SLC3A2-222ENST00000546253 BAZ1AQ9NRL2 1556 aaPredicted RBP29.59■■■□□ 2.33
SLC3A2-222ENST00000546253 LAMC3Q9Y6N6 1575 aa29.56■■■□□ 2.32
SLC3A2-222ENST00000546253 PEG3Q9GZU2 1588 aa29.47■■■□□ 2.31
SLC3A2-222ENST00000546253 PDS5BQ9NTI5 1447 aa29.46■■■□□ 2.31
SLC3A2-222ENST00000546253 TRIM41Q8WV44 630 aa29.43■■■□□ 2.3
SLC3A2-222ENST00000546253 KIF21AQ7Z4S6 1674 aa29.39■■■□□ 2.3
SLC3A2-222ENST00000546253 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.27
SLC3A2-222ENST00000546253 CADPSQ9ULU8 1353 aa29.21■■■□□ 2.27
SLC3A2-222ENST00000546253 MRC2Q9UBG0 1479 aa29.21■■■□□ 2.27
SLC3A2-222ENST00000546253 WDR62O43379 1518 aa29.12■■■□□ 2.25
SLC3A2-222ENST00000546253 CEP164Q9UPV0 1460 aa29■■■□□ 2.23
SLC3A2-222ENST00000546253 OSCARQ8IYS5 282 aa28.91■■■□□ 2.22
SLC3A2-222ENST00000546253 FANCD2Q9BXW9 1451 aa28.89■■■□□ 2.22
SLC3A2-222ENST00000546253 WIZO95785 1651 aa28.86■■■□□ 2.21
SLC3A2-222ENST00000546253 CFTRP13569 1480 aa28.74■■■□□ 2.19
SLC3A2-222ENST00000546253 URB2Q14146 1524 aaKnown RBP28.64■■■□□ 2.17
SLC3A2-222ENST00000546253 TOP2AP11388 1531 aaKnown RBP28.53■■■□□ 2.16
SLC3A2-222ENST00000546253 RIMBP3CA6NJZ7 1639 aa28.52■■■□□ 2.16
SLC3A2-222ENST00000546253 RIMBP3BA6NNM3 1639 aa28.52■■■□□ 2.16
SLC3A2-222ENST00000546253 RIMBP3Q9UFD9 1639 aa28.52■■■□□ 2.16
SLC3A2-222ENST00000546253 RSF1Q96T23 1441 aaPredicted RBP28.47■■■□□ 2.15
SLC3A2-222ENST00000546253 IFT140Q96RY7 1462 aa28.44■■■□□ 2.14
SLC3A2-222ENST00000546253 ARHGEF11O15085 1522 aa28.4■■■□□ 2.14
SLC3A2-222ENST00000546253 ZNF608Q9ULD9 1512 aaPredicted RBP28.37■■■□□ 2.13
SLC3A2-222ENST00000546253 PRDM2Q13029 1718 aa28.36■■■□□ 2.13
SLC3A2-222ENST00000546253 TOPBP1Q92547 1522 aa28.25■■■□□ 2.11
SLC3A2-222ENST00000546253 CYB5RLQ6IPT4 315 aa28.25■■■□□ 2.11
SLC3A2-222ENST00000546253 ABCC8Q09428 1581 aa28.22■■■□□ 2.11
SLC3A2-222ENST00000546253 EIF4G3O43432 1585 aaKnown RBP28.21■■■□□ 2.11
SLC3A2-222ENST00000546253 TRHP20396 242 aaPredicted RBP28.19■■■□□ 2.1
SLC3A2-222ENST00000546253 CCDC88BA6NC98 1476 aa28.18■■■□□ 2.1
SLC3A2-222ENST00000546253 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
SLC3A2-222ENST00000546253 FBLN2P98095 1184 aa28.09■■■□□ 2.09
SLC3A2-222ENST00000546253 CHD1O14646 1710 aa28.07■■■□□ 2.08
SLC3A2-222ENST00000546253 AQRO60306 1485 aaKnown RBP eCLIP28.07■■■□□ 2.081e-9■■■■■ 29.4
SLC3A2-222ENST00000546253 ARAP1Q96P48 1450 aa28.07■■■□□ 2.08
SLC3A2-222ENST00000546253 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
SLC3A2-222ENST00000546253 POLA1P09884 1462 aaPredicted RBP27.93■■■□□ 2.06
SLC3A2-222ENST00000546253 AEBP2Q6ZN18 517 aaPredicted RBP27.83■■■□□ 2.05
SLC3A2-222ENST00000546253 TDRD9Q8NDG6 1382 aaKnown RBP27.82■■■□□ 2.04
SLC3A2-222ENST00000546253 SOGA1O94964 1423 aa27.82■■■□□ 2.04
SLC3A2-222ENST00000546253 RAD54L2Q9Y4B4 1467 aa27.82■■■□□ 2.04
SLC3A2-222ENST00000546253 SNAPC4Q5SXM2 1469 aa27.79■■■□□ 2.04
SLC3A2-222ENST00000546253 CHMP7Q8WUX9 453 aaPredicted RBP27.78■■■□□ 2.04
SLC3A2-222ENST00000546253 WDR97A6NE52 1622 aa27.76■■■□□ 2.03
SLC3A2-222ENST00000546253 SYNJ1O43426 1573 aa27.76■■■□□ 2.03
SLC3A2-222ENST00000546253 CLASP1Q7Z460 1538 aa27.76■■■□□ 2.03
SLC3A2-222ENST00000546253 MAGI1Q96QZ7 1491 aaPredicted RBP27.71■■■□□ 2.03
SLC3A2-222ENST00000546253 FGD5Q6ZNL6 1462 aa27.69■■■□□ 2.02
SLC3A2-222ENST00000546253 GRIN2BQ13224 1484 aa27.66■■■□□ 2.02
SLC3A2-222ENST00000546253 SYNJ2O15056 1496 aa27.63■■■□□ 2.01
SLC3A2-222ENST00000546253 GAPVD1Q14C86 1478 aa27.55■■■□□ 2
SLC3A2-222ENST00000546253 CUX1P39880 1505 aa27.54■■■□□ 2
SLC3A2-222ENST00000546253 PBRM1Q86U86 1689 aa27.45■■□□□ 1.98
SLC3A2-222ENST00000546253 ABCA10Q8WWZ4 1543 aa27.34■■□□□ 1.97
SLC3A2-222ENST00000546253 ABCA5Q8WWZ7 1642 aa27.31■■□□□ 1.96
SLC3A2-222ENST00000546253 GRIN2AQ12879 1464 aa27.28■■□□□ 1.96
SLC3A2-222ENST00000546253 ERCC6L2Q5T890 1561 aa27.24■■□□□ 1.95
SLC3A2-222ENST00000546253 CEP170Q5SW79 1584 aa27.21■■□□□ 1.95
SLC3A2-222ENST00000546253 NUP160Q12769 1436 aa27.19■■□□□ 1.94
SLC3A2-222ENST00000546253 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
SLC3A2-222ENST00000546253 WRNQ14191 1432 aaPredicted RBP eCLIP27.16■■□□□ 1.94
SLC3A2-222ENST00000546253 FHAD1B1AJZ9 1412 aa27.12■■□□□ 1.93
SLC3A2-222ENST00000546253 SHROOM2Q13796 1616 aa27.09■■□□□ 1.93
SLC3A2-222ENST00000546253 PRG4Q92954 1404 aaPredicted RBP27.01■■□□□ 1.91
SLC3A2-222ENST00000546253 KIF13AQ9H1H9 1805 aa27.01■■□□□ 1.91
SLC3A2-222ENST00000546253 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
SLC3A2-222ENST00000546253 NPM1P06748 294 aaKnown RBP eCLIP26.96■■□□□ 1.91
SLC3A2-222ENST00000546253 TOP2BQ02880 1626 aa26.96■■□□□ 1.91
SLC3A2-222ENST00000546253 BIVM-ERCC5R4GMW8 1640 aa26.95■■□□□ 1.91
SLC3A2-222ENST00000546253 FAM69CQ0P6D2 419 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms