RNA–Protein interactions for RNA: ENST00000492348.6

RBBP4-214, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 1,547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-214ENST00000492348 AEBP2Q6ZN18 517 aaPredicted RBP20.36■□□□□ 0.85
RBBP4-214ENST00000492348 CHIC1Q5VXU3 224 aa20.1■□□□□ 0.81
RBBP4-214ENST00000492348 PHF23Q9BUL5 403 aaPredicted RBP17.68■□□□□ 0.42
RBBP4-214ENST00000492348 SENP3Q9H4L4 574 aaPredicted RBP17.27■□□□□ 0.36
RBBP4-214ENST00000492348 PLPPR3Q6T4P5 718 aa16.42■□□□□ 0.22
RBBP4-214ENST00000492348 NISCHQ9Y2I1 1504 aa16.03■□□□□ 0.16
RBBP4-214ENST00000492348 FOXD1Q16676 465 aa15.99■□□□□ 0.15
RBBP4-214ENST00000492348 ADRA2BP18089 450 aa15.54■□□□□ 0.08
RBBP4-214ENST00000492348 PPP6R1Q9UPN7 881 aa15.53■□□□□ 0.08
RBBP4-214ENST00000492348 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
RBBP4-214ENST00000492348 PIAS4Q8N2W9 510 aaPredicted RBP15.14■□□□□ 0.01
RBBP4-214ENST00000492348 MSH5O43196 834 aa14.69□□□□□ -0.06
RBBP4-214ENST00000492348 PPP4R3CPQ6ZMV5 832 aa14.49□□□□□ -0.09
RBBP4-214ENST00000492348 KCNA4P22459 653 aa14.36□□□□□ -0.11
RBBP4-214ENST00000492348 SCAF1Q9H7N4 1312 aaKnown RBP14.26□□□□□ -0.13
RBBP4-214ENST00000492348 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
RBBP4-214ENST00000492348 CCDC180Q9P1Z9 1646 aa14.06□□□□□ -0.16
RBBP4-214ENST00000492348 CNKSR2Q8WXI2 1034 aa14.05□□□□□ -0.16
RBBP4-214ENST00000492348 MAPK8IP2Q13387 824 aaPredicted RBP14.04□□□□□ -0.16
RBBP4-214ENST00000492348 NPM3O75607 178 aaKnown RBP13.95□□□□□ -0.18
RBBP4-214ENST00000492348 DMRT2Q9Y5R5 561 aa13.82□□□□□ -0.2
RBBP4-214ENST00000492348 SLC4A1APQ9BWU0 796 aaKnown RBP13.73□□□□□ -0.21
RBBP4-214ENST00000492348 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
RBBP4-214ENST00000492348 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
RBBP4-214ENST00000492348 EHMT2Q96KQ7 1210 aa13.54□□□□□ -0.24
RBBP4-214ENST00000492348 ZCCHC6Q5VYS8 1495 aaKnown RBP13.53□□□□□ -0.24
RBBP4-214ENST00000492348 DNAJC5BQ9UF47 199 aa13.52□□□□□ -0.25
RBBP4-214ENST00000492348 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
RBBP4-214ENST00000492348 DCAF1Q9Y4B6 1507 aa13.27□□□□□ -0.29
RBBP4-214ENST00000492348 DCAF8L1A6NGE4 600 aa13.22□□□□□ -0.29
RBBP4-214ENST00000492348 ZBTB22O15209 634 aa13.2□□□□□ -0.3
RBBP4-214ENST00000492348 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
RBBP4-214ENST00000492348 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
RBBP4-214ENST00000492348 SHROOM4Q9ULL8 1493 aa13.07□□□□□ -0.32
RBBP4-214ENST00000492348 MYO15BQ96JP2 1530 aa13.06□□□□□ -0.32
RBBP4-214ENST00000492348 ABCC9O60706 1549 aa13.04□□□□□ -0.32
RBBP4-214ENST00000492348 CACNB1Q02641 598 aaPredicted RBP13.03□□□□□ -0.32
RBBP4-214ENST00000492348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.334e-8■■■□□ 17.9
RBBP4-214ENST00000492348 DCAF8L2P0C7V8 631 aa12.96□□□□□ -0.33
RBBP4-214ENST00000492348 NACADO15069 1562 aa12.95□□□□□ -0.34
RBBP4-214ENST00000492348 MYCNP04198 464 aaPredicted RBP12.9□□□□□ -0.34
RBBP4-214ENST00000492348 SCRIBQ14160 1630 aa12.9□□□□□ -0.34
RBBP4-214ENST00000492348 RB1CC1Q8TDY2 1594 aa12.83□□□□□ -0.36
RBBP4-214ENST00000492348 UNC13AQ9UPW8 1703 aa12.8□□□□□ -0.36
RBBP4-214ENST00000492348 U3KPZ7 1027 aaPredicted RBP12.78□□□□□ -0.36
RBBP4-214ENST00000492348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.71□□□□□ -0.38
RBBP4-214ENST00000492348 ATXN8OSP0DMR3 200 aa12.71□□□□□ -0.38
RBBP4-214ENST00000492348 HNRNPUL2Q1KMD3 747 aaKnown RBP12.71□□□□□ -0.38
RBBP4-214ENST00000492348 SAMD1Q6SPF0 538 aaPredicted RBP12.67□□□□□ -0.38
RBBP4-214ENST00000492348 RNF39Q9H2S5 420 aa12.59□□□□□ -0.39
RBBP4-214ENST00000492348 APLP2Q06481 763 aa12.54□□□□□ -0.4
RBBP4-214ENST00000492348 SUPT5HO00267 1087 aaKnown RBP12.53□□□□□ -0.4
RBBP4-214ENST00000492348 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
RBBP4-214ENST00000492348 BICRAQ9NZM4 1560 aa12.51□□□□□ -0.41
RBBP4-214ENST00000492348 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
RBBP4-214ENST00000492348 CECR2Q9BXF3 1484 aa12.44□□□□□ -0.42
RBBP4-214ENST00000492348 RSF1Q96T23 1441 aaPredicted RBP12.43□□□□□ -0.42
RBBP4-214ENST00000492348 MROH2BQ7Z745 1585 aa12.41□□□□□ -0.42
RBBP4-214ENST00000492348 WIZO95785 1651 aa12.38□□□□□ -0.43
RBBP4-214ENST00000492348 SMARCA4P51532 1647 aa12.38□□□□□ -0.43
RBBP4-214ENST00000492348 BAZ1AQ9NRL2 1556 aaPredicted RBP12.37□□□□□ -0.43
RBBP4-214ENST00000492348 SPINK5Q9NQ38 1064 aaPredicted RBP12.36□□□□□ -0.43
RBBP4-214ENST00000492348 ZNF219Q9P2Y4 722 aaPredicted RBP12.33□□□□□ -0.44
RBBP4-214ENST00000492348 CAPN15O75808 1086 aa12.32□□□□□ -0.44
RBBP4-214ENST00000492348 TRHP20396 242 aaPredicted RBP12.31□□□□□ -0.44
RBBP4-214ENST00000492348 PABPN1Q86U42 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
RBBP4-214ENST00000492348 TOP2AP11388 1531 aaKnown RBP12.21□□□□□ -0.45
RBBP4-214ENST00000492348 PEG3Q9GZU2 1588 aa12.21□□□□□ -0.45
RBBP4-214ENST00000492348 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
RBBP4-214ENST00000492348 POLA2Q14181 598 aa12.15□□□□□ -0.46
RBBP4-214ENST00000492348 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
RBBP4-214ENST00000492348 ABCB7O75027 752 aa12.09□□□□□ -0.47
RBBP4-214ENST00000492348 DSG3P32926 999 aa12.06□□□□□ -0.48
RBBP4-214ENST00000492348 ATAD2BQ9ULI0 1458 aa12.04□□□□□ -0.48
RBBP4-214ENST00000492348 FKBP8Q14318 412 aa12.02□□□□□ -0.48
RBBP4-214ENST00000492348 CCDC88BA6NC98 1476 aa12.02□□□□□ -0.49
RBBP4-214ENST00000492348 FBLN2P98095 1184 aa12.01□□□□□ -0.49
RBBP4-214ENST00000492348 POTEHQ6S545 545 aa12.01□□□□□ -0.49
RBBP4-214ENST00000492348 BAZ1BQ9UIG0 1483 aaKnown RBP11.98□□□□□ -0.49
RBBP4-214ENST00000492348 HMGXB3Q12766 1538 aa11.98□□□□□ -0.49
RBBP4-214ENST00000492348 MKRN4PQ13434 485 aaPredicted RBP11.98□□□□□ -0.49
RBBP4-214ENST00000492348 ZBTB12Q9Y330 459 aaPredicted RBP11.97□□□□□ -0.49
RBBP4-214ENST00000492348 PRDM2Q13029 1718 aa11.9□□□□□ -0.51
RBBP4-214ENST00000492348 NCAPD3P42695 1498 aa11.89□□□□□ -0.51
RBBP4-214ENST00000492348 CC2D2AQ9P2K1 1620 aa11.89□□□□□ -0.51
RBBP4-214ENST00000492348 ABCC8Q09428 1581 aa11.88□□□□□ -0.51
RBBP4-214ENST00000492348 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
RBBP4-214ENST00000492348 SYNJ1O43426 1573 aa11.77□□□□□ -0.53
RBBP4-214ENST00000492348 TRIM41Q8WV44 630 aa11.76□□□□□ -0.53
RBBP4-214ENST00000492348 BIVM-ERCC5R4GMW8 1640 aa11.73□□□□□ -0.53
RBBP4-214ENST00000492348 OSCARQ8IYS5 282 aa11.71□□□□□ -0.53
RBBP4-214ENST00000492348 WRNQ14191 1432 aaPredicted RBP eCLIP11.68□□□□□ -0.54
RBBP4-214ENST00000492348 TOP2BQ02880 1626 aa11.68□□□□□ -0.54
RBBP4-214ENST00000492348 CFTRP13569 1480 aa11.68□□□□□ -0.54
RBBP4-214ENST00000492348 SPDYE2BA6NHP3 402 aa11.66□□□□□ -0.54
RBBP4-214ENST00000492348 SPDYE6P0CI01 402 aa11.66□□□□□ -0.54
RBBP4-214ENST00000492348 SPDYE2Q495Y8 402 aa11.66□□□□□ -0.54
RBBP4-214ENST00000492348 PROM2Q8N271 834 aa11.65□□□□□ -0.55
RBBP4-214ENST00000492348 ZNF692Q9BU19 519 aaPredicted RBP11.65□□□□□ -0.55
RBBP4-214ENST00000492348 LOC105371045A0A1W2PR82 267 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms