RNA–Protein interactions for RNA: ENST00000291503.9

ATP13A1-201, Transcript of ATPase 13A1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATP13A1, Length 3,483 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-201ENST00000291503 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
ATP13A1-201ENST00000291503 SHROOM4Q9ULL8 1493 aa19.46■□□□□ 0.71
ATP13A1-201ENST00000291503 DCAF8L2P0C7V8 631 aa19.36■□□□□ 0.69
ATP13A1-201ENST00000291503 SUPT5HO00267 1087 aaKnown RBP19.18■□□□□ 0.66
ATP13A1-201ENST00000291503 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.55
ATP13A1-201ENST00000291503 CCDC180Q9P1Z9 1646 aa18.33■□□□□ 0.52
ATP13A1-201ENST00000291503 CHIC1Q5VXU3 224 aa18.22■□□□□ 0.51
ATP13A1-201ENST00000291503 PCGF6Q9BYE7 350 aa17.95■□□□□ 0.46
ATP13A1-201ENST00000291503 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
ATP13A1-201ENST00000291503 LOC105371045A0A1W2PR82 267 aa17.93■□□□□ 0.46
ATP13A1-201ENST00000291503 MYO15BQ96JP2 1530 aa17.87■□□□□ 0.45
ATP13A1-201ENST00000291503 FAM9AQ8IZU1 332 aaPredicted RBP17.85■□□□□ 0.45
ATP13A1-201ENST00000291503 ABCC9O60706 1549 aa17.8■□□□□ 0.44
ATP13A1-201ENST00000291503 TRIM41Q8WV44 630 aa17.73■□□□□ 0.43
ATP13A1-201ENST00000291503 DCAF1Q9Y4B6 1507 aa17.71■□□□□ 0.43
ATP13A1-201ENST00000291503 SCRIBQ14160 1630 aa17.69■□□□□ 0.42
ATP13A1-201ENST00000291503 HRCP23327 699 aa17.67■□□□□ 0.42
ATP13A1-201ENST00000291503 PPARGC1BQ86YN6 1023 aaKnown RBP17.51■□□□□ 0.39
ATP13A1-201ENST00000291503 RSF1Q96T23 1441 aaPredicted RBP17.5■□□□□ 0.39
ATP13A1-201ENST00000291503 TRIM26Q12899 539 aaPredicted RBP17.37■□□□□ 0.37
ATP13A1-201ENST00000291503 CECR2Q9BXF3 1484 aa17.33■□□□□ 0.36
ATP13A1-201ENST00000291503 TTBK1Q5TCY1 1321 aaPredicted RBP17.29■□□□□ 0.36
ATP13A1-201ENST00000291503 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.363e-7■■□□□ 13.3
ATP13A1-201ENST00000291503 RB1CC1Q8TDY2 1594 aa17.22■□□□□ 0.35
ATP13A1-201ENST00000291503 NACADO15069 1562 aa17.21■□□□□ 0.35
ATP13A1-201ENST00000291503 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
ATP13A1-201ENST00000291503 PELP1Q8IZL8 1130 aaKnown RBP17.07■□□□□ 0.32
ATP13A1-201ENST00000291503 UBTFP17480 764 aaKnown RBP17.04■□□□□ 0.32
ATP13A1-201ENST00000291503 WIZO95785 1651 aa17.01■□□□□ 0.31
ATP13A1-201ENST00000291503 RANGAP1P46060 587 aaPredicted RBP17■□□□□ 0.31
ATP13A1-201ENST00000291503 ZEB1P37275 1124 aaPredicted RBP16.95■□□□□ 0.3
ATP13A1-201ENST00000291503 CCER1Q8TC90 406 aaPredicted RBP16.93■□□□□ 0.3
ATP13A1-201ENST00000291503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
ATP13A1-201ENST00000291503 BAZ1AQ9NRL2 1556 aaPredicted RBP16.88■□□□□ 0.29
ATP13A1-201ENST00000291503 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
ATP13A1-201ENST00000291503 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
ATP13A1-201ENST00000291503 CCDC88BA6NC98 1476 aa16.78■□□□□ 0.28
ATP13A1-201ENST00000291503 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
ATP13A1-201ENST00000291503 APLP2Q06481 763 aa16.72■□□□□ 0.27
ATP13A1-201ENST00000291503 SOGA1O94964 1423 aa16.71■□□□□ 0.27
ATP13A1-201ENST00000291503 SMARCA4P51532 1647 aa16.66■□□□□ 0.26
ATP13A1-201ENST00000291503 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
ATP13A1-201ENST00000291503 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
ATP13A1-201ENST00000291503 CEP162Q5TB80 1403 aa16.6■□□□□ 0.25
ATP13A1-201ENST00000291503 RUSC2Q8N2Y8 1516 aa16.58■□□□□ 0.25
ATP13A1-201ENST00000291503 WRNQ14191 1432 aaPredicted RBP eCLIP16.56■□□□□ 0.24
ATP13A1-201ENST00000291503 SMARCA2P51531 1590 aa16.56■□□□□ 0.24
ATP13A1-201ENST00000291503 TNIKQ9UKE5 1360 aa16.5■□□□□ 0.23
ATP13A1-201ENST00000291503 BAZ1BQ9UIG0 1483 aaKnown RBP16.49■□□□□ 0.23
ATP13A1-201ENST00000291503 MYT1Q01538 1121 aa16.46■□□□□ 0.22
ATP13A1-201ENST00000291503 UNC13AQ9UPW8 1703 aa16.43■□□□□ 0.22
ATP13A1-201ENST00000291503 EEA1Q15075 1411 aa16.42■□□□□ 0.22
ATP13A1-201ENST00000291503 DIEXFQ68CQ4 756 aaKnown RBP16.42■□□□□ 0.22
ATP13A1-201ENST00000291503 GOLGA3Q08378 1498 aa16.42■□□□□ 0.22
ATP13A1-201ENST00000291503 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
ATP13A1-201ENST00000291503 BICRAQ9NZM4 1560 aa16.4■□□□□ 0.22
ATP13A1-201ENST00000291503 ITGAEP38570 1179 aa16.38■□□□□ 0.21
ATP13A1-201ENST00000291503 ATP1B4Q9UN42 357 aaPredicted RBP16.38■□□□□ 0.21
ATP13A1-201ENST00000291503 CLIP1P30622 1438 aa16.37■□□□□ 0.21
ATP13A1-201ENST00000291503 NEUROD1Q13562 356 aa16.37■□□□□ 0.21
ATP13A1-201ENST00000291503 ACIN1Q9UKV3 1341 aaKnown RBP16.36■□□□□ 0.21
ATP13A1-201ENST00000291503 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
ATP13A1-201ENST00000291503 GTF3C3Q9Y5Q9 886 aa16.34■□□□□ 0.21
ATP13A1-201ENST00000291503 YTHDC1Q96MU7 727 aaKnown RBP16.34■□□□□ 0.21
ATP13A1-201ENST00000291503 CEP164Q9UPV0 1460 aa16.31■□□□□ 0.2
ATP13A1-201ENST00000291503 RAPGEF2Q9Y4G8 1499 aa16.24■□□□□ 0.19
ATP13A1-201ENST00000291503 SYNJ1O43426 1573 aa16.24■□□□□ 0.19
ATP13A1-201ENST00000291503 CENPBP07199 599 aaPredicted RBP16.24■□□□□ 0.19
ATP13A1-201ENST00000291503 ZNF316A6NFI3 1004 aaPredicted RBP16.22■□□□□ 0.19
ATP13A1-201ENST00000291503 P3H3Q8IVL6 736 aa16.21■□□□□ 0.18
ATP13A1-201ENST00000291503 VPS8Q8N3P4 1428 aa16.15■□□□□ 0.18
ATP13A1-201ENST00000291503 KANK4Q5T7N3 995 aaPredicted RBP16.13■□□□□ 0.17
ATP13A1-201ENST00000291503 PEG3Q9GZU2 1588 aa16.1■□□□□ 0.17
ATP13A1-201ENST00000291503 KIF27Q86VH2 1401 aa16.09■□□□□ 0.17
ATP13A1-201ENST00000291503 FAM50AQ14320 339 aaKnown RBP16.07■□□□□ 0.16
ATP13A1-201ENST00000291503 MIER1Q8N108 512 aa16.03■□□□□ 0.16
ATP13A1-201ENST00000291503 NCAPD3P42695 1498 aa16.02■□□□□ 0.16
ATP13A1-201ENST00000291503 CUX2O14529 1486 aa16■□□□□ 0.15
ATP13A1-201ENST00000291503 KIF21BO75037 1637 aa15.99■□□□□ 0.15
ATP13A1-201ENST00000291503 TOP2BQ02880 1626 aa15.95■□□□□ 0.14
ATP13A1-201ENST00000291503 CUX1P39880 1505 aa15.93■□□□□ 0.14
ATP13A1-201ENST00000291503 CARMIL1Q5VZK9 1371 aa15.93■□□□□ 0.14
ATP13A1-201ENST00000291503 CADPSQ9ULU8 1353 aa15.93■□□□□ 0.14
ATP13A1-201ENST00000291503 PRXQ9BXM0 1461 aa15.9■□□□□ 0.14
ATP13A1-201ENST00000291503 CFTRP13569 1480 aa15.9■□□□□ 0.14
ATP13A1-201ENST00000291503 ARAP1Q96P48 1450 aa15.89■□□□□ 0.13
ATP13A1-201ENST00000291503 IGF1RP08069 1367 aa15.87■□□□□ 0.13
ATP13A1-201ENST00000291503 ARID3CA6NKF2 412 aa15.85■□□□□ 0.13
ATP13A1-201ENST00000291503 HMGXB3Q12766 1538 aa15.85■□□□□ 0.13
ATP13A1-201ENST00000291503 CCNB3Q8WWL7 1395 aa15.85■□□□□ 0.13
ATP13A1-201ENST00000291503 DHX57Q6P158 1386 aaKnown RBP15.8■□□□□ 0.12
ATP13A1-201ENST00000291503 FGD5Q6ZNL6 1462 aa15.79■□□□□ 0.12
ATP13A1-201ENST00000291503 ERICH3Q5RHP9 1530 aa15.78■□□□□ 0.12
ATP13A1-201ENST00000291503 ARHGAP35Q9NRY4 1499 aa15.78■□□□□ 0.12
ATP13A1-201ENST00000291503 SIN3AQ96ST3 1273 aa15.77■□□□□ 0.12
ATP13A1-201ENST00000291503 HIRIP3Q9BW71 556 aaPredicted RBP15.77■□□□□ 0.12
ATP13A1-201ENST00000291503 BCL11AQ9H165 835 aa15.76■□□□□ 0.11
ATP13A1-201ENST00000291503 RAD54L2Q9Y4B4 1467 aa15.76■□□□□ 0.11
ATP13A1-201ENST00000291503 BIVM-ERCC5R4GMW8 1640 aa15.75■□□□□ 0.11
ATP13A1-201ENST00000291503 FANCD2Q9BXW9 1451 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms