RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 NISCHQ9Y2I1 1504 aa15.83■□□□□ 0.12
SPARC-201ENST00000231061 SLC24A1O60721 1099 aa15.49■□□□□ 0.07
SPARC-201ENST00000231061 PELP1Q8IZL8 1130 aaKnown RBP15.04■□□□□ -0
SPARC-201ENST00000231061 MYT1Q01538 1121 aa14.99□□□□□ -0.01
SPARC-201ENST00000231061 PRKCSHP14314 528 aaPredicted RBP14.93□□□□□ -0.02
SPARC-201ENST00000231061 TTBK1Q5TCY1 1321 aaPredicted RBP14.56□□□□□ -0.08
SPARC-201ENST00000231061 ERICH6Q7L0X2 663 aa14.43□□□□□ -0.1
SPARC-201ENST00000231061 APLP2Q06481 763 aa14.39□□□□□ -0.11
SPARC-201ENST00000231061 DAXXQ9UER7 740 aaPredicted RBP14.32□□□□□ -0.12
SPARC-201ENST00000231061 BCL11AQ9H165 835 aa13.94□□□□□ -0.18
SPARC-201ENST00000231061 EIF5BO60841 1220 aaKnown RBP13.86□□□□□ -0.19
SPARC-201ENST00000231061 PLPPR3Q6T4P5 718 aa13.85□□□□□ -0.19
SPARC-201ENST00000231061 EHMT2Q96KQ7 1210 aa13.84□□□□□ -0.19
SPARC-201ENST00000231061 SHROOM4Q9ULL8 1493 aa13.78□□□□□ -0.2
SPARC-201ENST00000231061 PLEKHG5O94827 1062 aa13.76□□□□□ -0.21
SPARC-201ENST00000231061 FAM9AQ8IZU1 332 aaPredicted RBP13.74□□□□□ -0.21
SPARC-201ENST00000231061 RTN4Q9NQC3 1192 aaKnown RBP13.64□□□□□ -0.23
SPARC-201ENST00000231061 SUPT5HO00267 1087 aaKnown RBP13.56□□□□□ -0.24
SPARC-201ENST00000231061 NCBP3Q53F19 620 aaKnown RBP13.53□□□□□ -0.24
SPARC-201ENST00000231061 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
SPARC-201ENST00000231061 DCAF8L2P0C7V8 631 aa13.4□□□□□ -0.26
SPARC-201ENST00000231061 ZCCHC6Q5VYS8 1495 aaKnown RBP13.38□□□□□ -0.27
SPARC-201ENST00000231061 TIMELESSQ9UNS1 1208 aa13.37□□□□□ -0.27
SPARC-201ENST00000231061 CCDC180Q9P1Z9 1646 aa13.33□□□□□ -0.27
SPARC-201ENST00000231061 AEBP2Q6ZN18 517 aaPredicted RBP13.29□□□□□ -0.28
SPARC-201ENST00000231061 PODXL2Q9NZ53 605 aa13.28□□□□□ -0.28
SPARC-201ENST00000231061 RANGAP1P46060 587 aaPredicted RBP13.22□□□□□ -0.29
SPARC-201ENST00000231061 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
SPARC-201ENST00000231061 TULP1O00294 542 aaPredicted RBP13.15□□□□□ -0.3
SPARC-201ENST00000231061 ARXQ96QS3 562 aa13.1□□□□□ -0.31
SPARC-201ENST00000231061 CHIC1Q5VXU3 224 aa13.09□□□□□ -0.31
SPARC-201ENST00000231061 MYO15BQ96JP2 1530 aa13.02□□□□□ -0.32
SPARC-201ENST00000231061 CENPBP07199 599 aaPredicted RBP12.96□□□□□ -0.33
SPARC-201ENST00000231061 ANO8Q9HCE9 1232 aaPredicted RBP12.94□□□□□ -0.34
SPARC-201ENST00000231061 DCAF1Q9Y4B6 1507 aa12.89□□□□□ -0.35
SPARC-201ENST00000231061 UBE2Q2Q8WVN8 375 aa12.89□□□□□ -0.35
SPARC-201ENST00000231061 PCGF6Q9BYE7 350 aa12.86□□□□□ -0.35
SPARC-201ENST00000231061 PKNOX2Q96KN3 472 aa12.84□□□□□ -0.35
SPARC-201ENST00000231061 PDIA4P13667 645 aaKnown RBP12.83□□□□□ -0.36
SPARC-201ENST00000231061 HRCP23327 699 aa12.83□□□□□ -0.36
SPARC-201ENST00000231061 HOMEZQ8IX15 550 aa12.79□□□□□ -0.36
SPARC-201ENST00000231061 LOC105371045A0A1W2PR82 267 aa12.77□□□□□ -0.36
SPARC-201ENST00000231061 PDE4CQ08493 712 aa12.75□□□□□ -0.37
SPARC-201ENST00000231061 AMER1Q5JTC6 1135 aaPredicted RBP12.73□□□□□ -0.37
SPARC-201ENST00000231061 KCNA4P22459 653 aa12.72□□□□□ -0.37
SPARC-201ENST00000231061 HAP1P54257 671 aaPredicted RBP12.71□□□□□ -0.38
SPARC-201ENST00000231061 SCRIBQ14160 1630 aa12.67□□□□□ -0.38
SPARC-201ENST00000231061 TAOK2Q9UL54 1235 aa12.67□□□□□ -0.38
SPARC-201ENST00000231061 PPARGC1BQ86YN6 1023 aaKnown RBP12.65□□□□□ -0.38
SPARC-201ENST00000231061 C14orf37Q86TY3 774 aa12.65□□□□□ -0.38
SPARC-201ENST00000231061 NPM2Q86SE8 214 aaKnown RBP12.64□□□□□ -0.39
SPARC-201ENST00000231061 ABCC9O60706 1549 aa12.64□□□□□ -0.39
SPARC-201ENST00000231061 DHX37Q8IY37 1157 aaKnown RBP12.64□□□□□ -0.39
SPARC-201ENST00000231061 CCDC136Q96JN2 1154 aa12.63□□□□□ -0.39
SPARC-201ENST00000231061 TPRNQ4KMQ1 711 aa12.63□□□□□ -0.39
SPARC-201ENST00000231061 CSRNP3Q8WYN3 585 aa12.62□□□□□ -0.39
SPARC-201ENST00000231061 ANP32EQ9BTT0 268 aa12.61□□□□□ -0.39
SPARC-201ENST00000231061 BCL11BQ9C0K0 894 aaPredicted RBP12.6□□□□□ -0.39
SPARC-201ENST00000231061 RSF1Q96T23 1441 aaPredicted RBP12.59□□□□□ -0.39
SPARC-201ENST00000231061 NEFLP07196 543 aa12.58□□□□□ -0.4
SPARC-201ENST00000231061 TRIM41Q8WV44 630 aa12.58□□□□□ -0.4
SPARC-201ENST00000231061 CHMP4AQ9BY43 222 aa12.54□□□□□ -0.4
SPARC-201ENST00000231061 A0A0U1RQG5 324 aaPredicted RBP12.53□□□□□ -0.4
SPARC-201ENST00000231061 TRIM26Q12899 539 aaPredicted RBP12.52□□□□□ -0.4
SPARC-201ENST00000231061 SALL2Q9Y467 1007 aaPredicted RBP12.47□□□□□ -0.41
SPARC-201ENST00000231061 RB1CC1Q8TDY2 1594 aa12.47□□□□□ -0.41
SPARC-201ENST00000231061 CECR2Q9BXF3 1484 aa12.39□□□□□ -0.43
SPARC-201ENST00000231061 GTF3C3Q9Y5Q9 886 aa12.38□□□□□ -0.43
SPARC-201ENST00000231061 NACADO15069 1562 aa12.37□□□□□ -0.43
SPARC-201ENST00000231061 FGD1P98174 961 aa12.36□□□□□ -0.43
SPARC-201ENST00000231061 TAF7LQ5H9L4 462 aa12.34□□□□□ -0.43
SPARC-201ENST00000231061 MROH2BQ7Z745 1585 aa12.34□□□□□ -0.43
SPARC-201ENST00000231061 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
SPARC-201ENST00000231061 PAXIP1Q6ZW49 1069 aaPredicted RBP12.3□□□□□ -0.44
SPARC-201ENST00000231061 ZEB1P37275 1124 aaPredicted RBP12.29□□□□□ -0.44
SPARC-201ENST00000231061 IRX6P78412 446 aaPredicted RBP12.29□□□□□ -0.44
SPARC-201ENST00000231061 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.28□□□□□ -0.44
SPARC-201ENST00000231061 WIZO95785 1651 aa12.27□□□□□ -0.45
SPARC-201ENST00000231061 ACIN1Q9UKV3 1341 aaKnown RBP12.26□□□□□ -0.45
SPARC-201ENST00000231061 BCANQ96GW7 911 aa12.22□□□□□ -0.45
SPARC-201ENST00000231061 BRD2P25440 801 aaKnown RBP12.22□□□□□ -0.45
SPARC-201ENST00000231061 NEUROD1Q13562 356 aa12.19□□□□□ -0.46
SPARC-201ENST00000231061 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
SPARC-201ENST00000231061 DEKP35659 375 aaKnown RBP12.16□□□□□ -0.46
SPARC-201ENST00000231061 BAZ1AQ9NRL2 1556 aaPredicted RBP12.16□□□□□ -0.46
SPARC-201ENST00000231061 AAMPQ13685 434 aa12.13□□□□□ -0.47
SPARC-201ENST00000231061 UBTFP17480 764 aaKnown RBP12.12□□□□□ -0.47
SPARC-201ENST00000231061 RBM10P98175 930 aaKnown RBP12.1□□□□□ -0.47
SPARC-201ENST00000231061 POLR3GLQ9BT43 218 aa12.1□□□□□ -0.47
SPARC-201ENST00000231061 CDK11BP21127 795 aaKnown RBP12.1□□□□□ -0.47
SPARC-201ENST00000231061 CDK11AQ9UQ88 783 aaPredicted RBP12.1□□□□□ -0.47
SPARC-201ENST00000231061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.08□□□□□ -0.48
SPARC-201ENST00000231061 CCER1Q8TC90 406 aaPredicted RBP12.08□□□□□ -0.48
SPARC-201ENST00000231061 ABCC8Q09428 1581 aa12.07□□□□□ -0.48
SPARC-201ENST00000231061 TOP2AP11388 1531 aaKnown RBP12.06□□□□□ -0.48
SPARC-201ENST00000231061 CCDC88BA6NC98 1476 aa12.04□□□□□ -0.48
SPARC-201ENST00000231061 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
SPARC-201ENST00000231061 PPP6R1Q9UPN7 881 aa12.04□□□□□ -0.48
SPARC-201ENST00000231061 SMARCA4P51532 1647 aa12.03□□□□□ -0.48
SPARC-201ENST00000231061 NAP1L5Q96NT1 182 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms