RNA–Protein interactions for RNA: ENST00000373493.9

RBBP4-202, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBBP4, Length 7,943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-202ENST00000373493 NISCHQ9Y2I1 1504 aa13.3□□□□□ -0.28
RBBP4-202ENST00000373493 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
RBBP4-202ENST00000373493 SUPT5HO00267 1087 aaKnown RBP11.86□□□□□ -0.51
RBBP4-202ENST00000373493 FAM9AQ8IZU1 332 aaPredicted RBP11.81□□□□□ -0.52
RBBP4-202ENST00000373493 APLP2Q06481 763 aa11.64□□□□□ -0.55
RBBP4-202ENST00000373493 SHROOM4Q9ULL8 1493 aa11.63□□□□□ -0.55
RBBP4-202ENST00000373493 ZEB1P37275 1124 aaPredicted RBP11.5□□□□□ -0.57
RBBP4-202ENST00000373493 PELP1Q8IZL8 1130 aaKnown RBP11.49□□□□□ -0.57
RBBP4-202ENST00000373493 TRIM41Q8WV44 630 aa11.36□□□□□ -0.59
RBBP4-202ENST00000373493 PCGF6Q9BYE7 350 aa11.18□□□□□ -0.62
RBBP4-202ENST00000373493 CCDC180Q9P1Z9 1646 aa11.14□□□□□ -0.63
RBBP4-202ENST00000373493 ZCCHC6Q5VYS8 1495 aaKnown RBP11.13□□□□□ -0.63
RBBP4-202ENST00000373493 EHMT2Q96KQ7 1210 aa11.08□□□□□ -0.64
RBBP4-202ENST00000373493 UBTFP17480 764 aaKnown RBP11.05□□□□□ -0.64
RBBP4-202ENST00000373493 CENPBP07199 599 aaPredicted RBP11.04□□□□□ -0.64
RBBP4-202ENST00000373493 DCAF1Q9Y4B6 1507 aa11.03□□□□□ -0.64
RBBP4-202ENST00000373493 CHIC1Q5VXU3 224 aa10.99□□□□□ -0.65
RBBP4-202ENST00000373493 TRIM26Q12899 539 aaPredicted RBP10.97□□□□□ -0.65
RBBP4-202ENST00000373493 ABCC9O60706 1549 aa10.96□□□□□ -0.66
RBBP4-202ENST00000373493 CCER1Q8TC90 406 aaPredicted RBP10.95□□□□□ -0.66
RBBP4-202ENST00000373493 ACIN1Q9UKV3 1341 aaKnown RBP10.89□□□□□ -0.67
RBBP4-202ENST00000373493 MYO15BQ96JP2 1530 aa10.87□□□□□ -0.67
RBBP4-202ENST00000373493 NACADO15069 1562 aa10.86□□□□□ -0.67
RBBP4-202ENST00000373493 EEA1Q15075 1411 aa10.83□□□□□ -0.68
RBBP4-202ENST00000373493 HRCP23327 699 aa10.83□□□□□ -0.68
RBBP4-202ENST00000373493 RB1CC1Q8TDY2 1594 aa10.82□□□□□ -0.68
RBBP4-202ENST00000373493 MYT1Q01538 1121 aa10.75□□□□□ -0.69
RBBP4-202ENST00000373493 TTBK1Q5TCY1 1321 aaPredicted RBP10.75□□□□□ -0.69
RBBP4-202ENST00000373493 NEFLP07196 543 aa10.74□□□□□ -0.69
RBBP4-202ENST00000373493 ATP1B4Q9UN42 357 aaPredicted RBP10.71□□□□□ -0.7
RBBP4-202ENST00000373493 CSRNP3Q8WYN3 585 aa10.7□□□□□ -0.7
RBBP4-202ENST00000373493 SCRIBQ14160 1630 aa10.68□□□□□ -0.7
RBBP4-202ENST00000373493 LOC105371045A0A1W2PR82 267 aa10.67□□□□□ -0.7
RBBP4-202ENST00000373493 CDK11AQ9UQ88 783 aaPredicted RBP10.67□□□□□ -0.7
RBBP4-202ENST00000373493 RANGAP1P46060 587 aaPredicted RBP10.63□□□□□ -0.71
RBBP4-202ENST00000373493 PABPN1Q86U42 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
RBBP4-202ENST00000373493 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.58□□□□□ -0.72
RBBP4-202ENST00000373493 HNRNPUL2Q1KMD3 747 aaKnown RBP10.58□□□□□ -0.72
RBBP4-202ENST00000373493 CLSPNQ9HAW4 1339 aa10.55□□□□□ -0.72
RBBP4-202ENST00000373493 BAZ1AQ9NRL2 1556 aaPredicted RBP10.55□□□□□ -0.72
RBBP4-202ENST00000373493 PPARGC1BQ86YN6 1023 aaKnown RBP10.53□□□□□ -0.72
RBBP4-202ENST00000373493 RSF1Q96T23 1441 aaPredicted RBP10.53□□□□□ -0.72
RBBP4-202ENST00000373493 ERICH6Q7L0X2 663 aa10.52□□□□□ -0.72
RBBP4-202ENST00000373493 BAZ1BQ9UIG0 1483 aaKnown RBP10.44□□□□□ -0.74
RBBP4-202ENST00000373493 GOLGA3Q08378 1498 aa10.43□□□□□ -0.74
RBBP4-202ENST00000373493 YTHDC1Q96MU7 727 aaKnown RBP10.43□□□□□ -0.74
RBBP4-202ENST00000373493 MYT1LQ9UL68 1186 aa10.43□□□□□ -0.74
RBBP4-202ENST00000373493 WRNQ14191 1432 aaPredicted RBP eCLIP10.41□□□□□ -0.74
RBBP4-202ENST00000373493 DIEXFQ68CQ4 756 aaKnown RBP10.41□□□□□ -0.74
RBBP4-202ENST00000373493 TNIKQ9UKE5 1360 aa10.4□□□□□ -0.74
RBBP4-202ENST00000373493 KIF27Q86VH2 1401 aa10.4□□□□□ -0.74
RBBP4-202ENST00000373493 CEP164Q9UPV0 1460 aa10.4□□□□□ -0.74
RBBP4-202ENST00000373493 SMARCA2P51531 1590 aa10.37□□□□□ -0.75
RBBP4-202ENST00000373493 FAM50AQ14320 339 aaKnown RBP10.37□□□□□ -0.75
RBBP4-202ENST00000373493 CLIP1P30622 1438 aa10.34□□□□□ -0.75
RBBP4-202ENST00000373493 ITGAEP38570 1179 aa10.34□□□□□ -0.75
RBBP4-202ENST00000373493 TRIM52Q96A61 297 aa10.34□□□□□ -0.75
RBBP4-202ENST00000373493 NPM1P06748 294 aaKnown RBP eCLIP10.33□□□□□ -0.76
RBBP4-202ENST00000373493 TIMELESSQ9UNS1 1208 aa10.31□□□□□ -0.76
RBBP4-202ENST00000373493 FHAD1B1AJZ9 1412 aa10.29□□□□□ -0.76
RBBP4-202ENST00000373493 ANP32CO43423 234 aa10.29□□□□□ -0.76
RBBP4-202ENST00000373493 ZNF316A6NFI3 1004 aaPredicted RBP10.28□□□□□ -0.76
RBBP4-202ENST00000373493 DAXXQ9UER7 740 aaPredicted RBP10.27□□□□□ -0.76
RBBP4-202ENST00000373493 PDS5BQ9NTI5 1447 aa10.26□□□□□ -0.77
RBBP4-202ENST00000373493 SLC24A1O60721 1099 aa10.24□□□□□ -0.77
RBBP4-202ENST00000373493 MTUS2Q5JR59 1369 aa10.24□□□□□ -0.77
RBBP4-202ENST00000373493 TONSLQ96HA7 1378 aa10.23□□□□□ -0.77
RBBP4-202ENST00000373493 NEFMP07197 916 aa10.23□□□□□ -0.77
RBBP4-202ENST00000373493 TSPY4P0CV99 314 aa10.22□□□□□ -0.77
RBBP4-202ENST00000373493 TSPY10P0CW01 314 aa10.22□□□□□ -0.77
RBBP4-202ENST00000373493 ABCC8Q09428 1581 aa10.21□□□□□ -0.78
RBBP4-202ENST00000373493 FBLN2P98095 1184 aa10.2□□□□□ -0.78
RBBP4-202ENST00000373493 TOP2AP11388 1531 aaKnown RBP10.2□□□□□ -0.78
RBBP4-202ENST00000373493 CEP162Q5TB80 1403 aa10.2□□□□□ -0.78
RBBP4-202ENST00000373493 CHMP7Q8WUX9 453 aaPredicted RBP10.19□□□□□ -0.78
RBBP4-202ENST00000373493 PLEKHD1A6NEE1 506 aa10.17□□□□□ -0.78
RBBP4-202ENST00000373493 ESF1Q9H501 851 aaKnown RBP10.16□□□□□ -0.78
RBBP4-202ENST00000373493 CDCA8Q53HL2 280 aa10.14□□□□□ -0.79
RBBP4-202ENST00000373493 CADPSQ9ULU8 1353 aa10.14□□□□□ -0.79
RBBP4-202ENST00000373493 GTF3C3Q9Y5Q9 886 aa10.12□□□□□ -0.79
RBBP4-202ENST00000373493 CARMIL2Q6F5E8 1435 aa10.12□□□□□ -0.79
RBBP4-202ENST00000373493 FMN1Q68DA7 1419 aa10.11□□□□□ -0.79
RBBP4-202ENST00000373493 CARMIL1Q5VZK9 1371 aa10.11□□□□□ -0.79
RBBP4-202ENST00000373493 EIF5BO60841 1220 aaKnown RBP10.11□□□□□ -0.79
RBBP4-202ENST00000373493 POLR3GLQ9BT43 218 aa10.1□□□□□ -0.79
RBBP4-202ENST00000373493 ZBTB47Q9UFB7 747 aaPredicted RBP10.09□□□□□ -0.79
RBBP4-202ENST00000373493 CECR2Q9BXF3 1484 aa10.09□□□□□ -0.79
RBBP4-202ENST00000373493 VPS8Q8N3P4 1428 aa10.09□□□□□ -0.79
RBBP4-202ENST00000373493 ATAD2BQ9ULI0 1458 aa10.07□□□□□ -0.8
RBBP4-202ENST00000373493 NCAPD3P42695 1498 aa10.07□□□□□ -0.8
RBBP4-202ENST00000373493 RSPH4AQ5TD94 716 aa10.07□□□□□ -0.8
RBBP4-202ENST00000373493 NEUROD1Q13562 356 aa10.06□□□□□ -0.8
RBBP4-202ENST00000373493 CCDC88BA6NC98 1476 aa10.05□□□□□ -0.8
RBBP4-202ENST00000373493 ZNF777Q9ULD5 760 aaPredicted RBP10.04□□□□□ -0.8
RBBP4-202ENST00000373493 CUX2O14529 1486 aa10.04□□□□□ -0.8
RBBP4-202ENST00000373493 RTL5Q5HYW3 569 aaPredicted RBP10.04□□□□□ -0.8
RBBP4-202ENST00000373493 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.04□□□□□ -0.8
RBBP4-202ENST00000373493 MROH2BQ7Z745 1585 aa10.04□□□□□ -0.8
RBBP4-202ENST00000373493 ERCC6Q03468 1493 aa10.04□□□□□ -0.8
RBBP4-202ENST00000373493 CCNB3Q8WWL7 1395 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms