RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 NISCHQ9Y2I1 1504 aa32.52■■■□□ 2.8
SNX17-205ENST00000464279 ABCC9O60706 1549 aa30.74■■■□□ 2.51
SNX17-205ENST00000464279 DNAJC5BQ9UF47 199 aa29.76■■■□□ 2.35
SNX17-205ENST00000464279 CCDC180Q9P1Z9 1646 aa29.67■■■□□ 2.34
SNX17-205ENST00000464279 RB1CC1Q8TDY2 1594 aa28.79■■■□□ 2.2
SNX17-205ENST00000464279 PABPN1Q86U42 306 aaKnown RBP eCLIP28.42■■■□□ 2.14
SNX17-205ENST00000464279 NACADO15069 1562 aa28.33■■■□□ 2.12
SNX17-205ENST00000464279 DNAJC5Q9H3Z4 198 aa28.17■■■□□ 2.1
SNX17-205ENST00000464279 UNC13AQ9UPW8 1703 aa28.02■■■□□ 2.08
SNX17-205ENST00000464279 BICRAQ9NZM4 1560 aa27.96■■■□□ 2.07
SNX17-205ENST00000464279 DCAF8L2P0C7V8 631 aa27.89■■■□□ 2.06
SNX17-205ENST00000464279 CECR2Q9BXF3 1484 aa27.83■■■□□ 2.04
SNX17-205ENST00000464279 CC2D2AQ9P2K1 1620 aa27.69■■■□□ 2.02
SNX17-205ENST00000464279 MYO15BQ96JP2 1530 aa27.58■■■□□ 2.01
SNX17-205ENST00000464279 SHROOM4Q9ULL8 1493 aa27.56■■■□□ 2
SNX17-205ENST00000464279 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.97
SNX17-205ENST00000464279 CUX2O14529 1486 aa26.99■■□□□ 1.91
SNX17-205ENST00000464279 SCRIBQ14160 1630 aa26.96■■□□□ 1.91
SNX17-205ENST00000464279 DCAF1Q9Y4B6 1507 aa26.82■■□□□ 1.88
SNX17-205ENST00000464279 ZCCHC6Q5VYS8 1495 aaKnown RBP26.74■■□□□ 1.87
SNX17-205ENST00000464279 ERCC6Q03468 1493 aa26.66■■□□□ 1.86
SNX17-205ENST00000464279 TRIM41Q8WV44 630 aa26.49■■□□□ 1.83
SNX17-205ENST00000464279 NCAPD3P42695 1498 aa26.16■■□□□ 1.78
SNX17-205ENST00000464279 NESP48681 1621 aa26.07■■□□□ 1.76
SNX17-205ENST00000464279 THOC2Q8NI27 1593 aaKnown RBP26.06■■□□□ 1.76
SNX17-205ENST00000464279 ATAD2BQ9ULI0 1458 aa25.92■■□□□ 1.74
SNX17-205ENST00000464279 HMGXB3Q12766 1538 aa25.88■■□□□ 1.73
SNX17-205ENST00000464279 SMARCA2P51531 1590 aa25.84■■□□□ 1.73
SNX17-205ENST00000464279 LAMC3Q9Y6N6 1575 aa25.74■■□□□ 1.71
SNX17-205ENST00000464279 KIF21AQ7Z4S6 1674 aa25.68■■□□□ 1.7
SNX17-205ENST00000464279 PDS5BQ9NTI5 1447 aa25.65■■□□□ 1.7
SNX17-205ENST00000464279 BAZ1BQ9UIG0 1483 aaKnown RBP25.63■■□□□ 1.69
SNX17-205ENST00000464279 SMARCA4P51532 1647 aa25.61■■□□□ 1.69
SNX17-205ENST00000464279 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
SNX17-205ENST00000464279 OSCARQ8IYS5 282 aa25.52■■□□□ 1.68
SNX17-205ENST00000464279 MRC2Q9UBG0 1479 aa25.5■■□□□ 1.67
SNX17-205ENST00000464279 WDR62O43379 1518 aa25.47■■□□□ 1.67
SNX17-205ENST00000464279 PEG3Q9GZU2 1588 aa25.38■■□□□ 1.65
SNX17-205ENST00000464279 RIMBP3CA6NJZ7 1639 aa25.31■■□□□ 1.64
SNX17-205ENST00000464279 RIMBP3BA6NNM3 1639 aa25.31■■□□□ 1.64
SNX17-205ENST00000464279 RIMBP3Q9UFD9 1639 aa25.31■■□□□ 1.64
SNX17-205ENST00000464279 CADPSQ9ULU8 1353 aa25.31■■□□□ 1.64
SNX17-205ENST00000464279 AEBP2Q6ZN18 517 aaPredicted RBP25.19■■□□□ 1.62
SNX17-205ENST00000464279 CEP164Q9UPV0 1460 aa25.18■■□□□ 1.62
SNX17-205ENST00000464279 ARHGEF11O15085 1522 aa25.15■■□□□ 1.62
SNX17-205ENST00000464279 TRHP20396 242 aaPredicted RBP25.09■■□□□ 1.61
SNX17-205ENST00000464279 MROH2BQ7Z745 1585 aa25.04■■□□□ 1.6
SNX17-205ENST00000464279 FANCD2Q9BXW9 1451 aa25.03■■□□□ 1.6
SNX17-205ENST00000464279 CYB5RLQ6IPT4 315 aa24.99■■□□□ 1.59
SNX17-205ENST00000464279 URB2Q14146 1524 aaKnown RBP24.89■■□□□ 1.57
SNX17-205ENST00000464279 ARAP1Q96P48 1450 aa24.83■■□□□ 1.56
SNX17-205ENST00000464279 CFTRP13569 1480 aa24.8■■□□□ 1.56
SNX17-205ENST00000464279 ZNF608Q9ULD9 1512 aaPredicted RBP24.76■■□□□ 1.55
SNX17-205ENST00000464279 IFT140Q96RY7 1462 aa24.71■■□□□ 1.55
SNX17-205ENST00000464279 RSF1Q96T23 1441 aaPredicted RBP24.66■■□□□ 1.54
SNX17-205ENST00000464279 WIZO95785 1651 aa24.66■■□□□ 1.54
SNX17-205ENST00000464279 EIF4G3O43432 1585 aaKnown RBP24.58■■□□□ 1.52
SNX17-205ENST00000464279 CHD1O14646 1710 aa24.55■■□□□ 1.52
SNX17-205ENST00000464279 FBLN2P98095 1184 aa24.45■■□□□ 1.5
SNX17-205ENST00000464279 TOPBP1Q92547 1522 aa24.43■■□□□ 1.5
SNX17-205ENST00000464279 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.493e-7■■■□□ 16.2
SNX17-205ENST00000464279 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
SNX17-205ENST00000464279 TOP2AP11388 1531 aaKnown RBP24.33■■□□□ 1.49
SNX17-205ENST00000464279 ABCC8Q09428 1581 aa24.31■■□□□ 1.48
SNX17-205ENST00000464279 CLASP1Q7Z460 1538 aa24.3■■□□□ 1.48
SNX17-205ENST00000464279 TARBP1Q13395 1621 aaKnown RBP24.28■■□□□ 1.48
SNX17-205ENST00000464279 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
SNX17-205ENST00000464279 ILDR1Q86SU0 546 aaPredicted RBP24.25■■□□□ 1.47
SNX17-205ENST00000464279 SYNJ1O43426 1573 aa24.19■■□□□ 1.46
SNX17-205ENST00000464279 GAPVD1Q14C86 1478 aa24.13■■□□□ 1.45
SNX17-205ENST00000464279 SNAPC4Q5SXM2 1469 aa24.13■■□□□ 1.45
SNX17-205ENST00000464279 POLA1P09884 1462 aaPredicted RBP24.12■■□□□ 1.45
SNX17-205ENST00000464279 CHMP7Q8WUX9 453 aaPredicted RBP24.1■■□□□ 1.45
SNX17-205ENST00000464279 TDRD9Q8NDG6 1382 aaKnown RBP24.07■■□□□ 1.44
SNX17-205ENST00000464279 CCDC88BA6NC98 1476 aa24.03■■□□□ 1.44
SNX17-205ENST00000464279 MAGI1Q96QZ7 1491 aaPredicted RBP24.03■■□□□ 1.44
SNX17-205ENST00000464279 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
SNX17-205ENST00000464279 WDR97A6NE52 1622 aa23.99■■□□□ 1.43
SNX17-205ENST00000464279 SYNJ2O15056 1496 aa23.97■■□□□ 1.43
SNX17-205ENST00000464279 SOGA1O94964 1423 aa23.97■■□□□ 1.43
SNX17-205ENST00000464279 GRIN2BQ13224 1484 aa23.92■■□□□ 1.42
SNX17-205ENST00000464279 KDM4FA0A1W2PPD8 638 aa23.83■■□□□ 1.41
SNX17-205ENST00000464279 KIF13AQ9H1H9 1805 aa23.82■■□□□ 1.4
SNX17-205ENST00000464279 ERCC6L2Q5T890 1561 aa23.81■■□□□ 1.4
SNX17-205ENST00000464279 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
SNX17-205ENST00000464279 PBRM1Q86U86 1689 aa23.69■■□□□ 1.38
SNX17-205ENST00000464279 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
SNX17-205ENST00000464279 FAM69CQ0P6D2 419 aa23.63■■□□□ 1.37
SNX17-205ENST00000464279 ABCC10Q5T3U5 1492 aa23.62■■□□□ 1.37
SNX17-205ENST00000464279 KDM6BO15054 1643 aa23.61■■□□□ 1.37
SNX17-205ENST00000464279 GRIN2AQ12879 1464 aa23.61■■□□□ 1.37
SNX17-205ENST00000464279 CUX1P39880 1505 aa23.59■■□□□ 1.37
SNX17-205ENST00000464279 NUP160Q12769 1436 aa23.58■■□□□ 1.36
SNX17-205ENST00000464279 SHROOM2Q13796 1616 aa23.56■■□□□ 1.36
SNX17-205ENST00000464279 ABCA5Q8WWZ7 1642 aa23.53■■□□□ 1.36
SNX17-205ENST00000464279 DIP2BQ9P265 1576 aa23.52■■□□□ 1.36
SNX17-205ENST00000464279 MAPKBP1O60336 1514 aa23.49■■□□□ 1.35
SNX17-205ENST00000464279 ABCA10Q8WWZ4 1543 aa23.48■■□□□ 1.35
SNX17-205ENST00000464279 HECW2Q9P2P5 1572 aa23.46■■□□□ 1.35
SNX17-205ENST00000464279 ADAMTS12P58397 1594 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms