RNA–Protein interactions for RNA: ENST00000396761.6

ATG9A-202, Transcript of autophagy related 9A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG9A, Length 3,799 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-202ENST00000396761 NISCHQ9Y2I1 1504 aa21.15■□□□□ 0.98
ATG9A-202ENST00000396761 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.56
ATG9A-202ENST00000396761 DCAF8L2P0C7V8 631 aa18.28■□□□□ 0.52
ATG9A-202ENST00000396761 SUPT5HO00267 1087 aaKnown RBP18.2■□□□□ 0.5
ATG9A-202ENST00000396761 PPARGC1BQ86YN6 1023 aaKnown RBP18.07■□□□□ 0.48
ATG9A-202ENST00000396761 PCGF6Q9BYE7 350 aa18.07■□□□□ 0.48
ATG9A-202ENST00000396761 HRCP23327 699 aa18.06■□□□□ 0.48
ATG9A-202ENST00000396761 CCDC180Q9P1Z9 1646 aa17.83■□□□□ 0.44
ATG9A-202ENST00000396761 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
ATG9A-202ENST00000396761 PELP1Q8IZL8 1130 aaKnown RBP17.49■□□□□ 0.39
ATG9A-202ENST00000396761 CHIC1Q5VXU3 224 aa17.39■□□□□ 0.38
ATG9A-202ENST00000396761 LOC105371045A0A1W2PR82 267 aa17.34■□□□□ 0.37
ATG9A-202ENST00000396761 MYO15BQ96JP2 1530 aa17.32■□□□□ 0.36
ATG9A-202ENST00000396761 SCAF1Q9H7N4 1312 aaKnown RBP17.24■□□□□ 0.35
ATG9A-202ENST00000396761 EHMT2Q96KQ7 1210 aa17.22■□□□□ 0.35
ATG9A-202ENST00000396761 DCAF1Q9Y4B6 1507 aa17.15■□□□□ 0.34
ATG9A-202ENST00000396761 TRIM26Q12899 539 aaPredicted RBP17.1■□□□□ 0.33
ATG9A-202ENST00000396761 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
ATG9A-202ENST00000396761 ABCC9O60706 1549 aa17.01■□□□□ 0.31
ATG9A-202ENST00000396761 FAM9AQ8IZU1 332 aaPredicted RBP16.96■□□□□ 0.31
ATG9A-202ENST00000396761 ZEB1P37275 1124 aaPredicted RBP16.92■□□□□ 0.3
ATG9A-202ENST00000396761 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
ATG9A-202ENST00000396761 GTF3C3Q9Y5Q9 886 aa16.85■□□□□ 0.29
ATG9A-202ENST00000396761 NEUROD1Q13562 356 aa16.82■□□□□ 0.28
ATG9A-202ENST00000396761 RSF1Q96T23 1441 aaPredicted RBP16.8■□□□□ 0.28
ATG9A-202ENST00000396761 ACIN1Q9UKV3 1341 aaKnown RBP16.77■□□□□ 0.28
ATG9A-202ENST00000396761 MYT1Q01538 1121 aa16.77■□□□□ 0.28
ATG9A-202ENST00000396761 TTBK1Q5TCY1 1321 aaPredicted RBP16.76■□□□□ 0.27
ATG9A-202ENST00000396761 YTHDC1Q96MU7 727 aaKnown RBP16.76■□□□□ 0.27
ATG9A-202ENST00000396761 CENPBP07199 599 aaPredicted RBP16.72■□□□□ 0.27
ATG9A-202ENST00000396761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.71■□□□□ 0.26
ATG9A-202ENST00000396761 CCER1Q8TC90 406 aaPredicted RBP16.7■□□□□ 0.26
ATG9A-202ENST00000396761 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
ATG9A-202ENST00000396761 CECR2Q9BXF3 1484 aa16.62■□□□□ 0.25
ATG9A-202ENST00000396761 NACADO15069 1562 aa16.61■□□□□ 0.25
ATG9A-202ENST00000396761 DIEXFQ68CQ4 756 aaKnown RBP16.59■□□□□ 0.25
ATG9A-202ENST00000396761 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
ATG9A-202ENST00000396761 WIZO95785 1651 aa16.41■□□□□ 0.22
ATG9A-202ENST00000396761 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
ATG9A-202ENST00000396761 BAZ1AQ9NRL2 1556 aaPredicted RBP16.28■□□□□ 0.2
ATG9A-202ENST00000396761 UBTFP17480 764 aaKnown RBP16.17■□□□□ 0.18
ATG9A-202ENST00000396761 ABCC8Q09428 1581 aa16.14■□□□□ 0.17
ATG9A-202ENST00000396761 MIER1Q8N108 512 aa16.13■□□□□ 0.17
ATG9A-202ENST00000396761 ZNF316A6NFI3 1004 aaPredicted RBP16.11■□□□□ 0.17
ATG9A-202ENST00000396761 CCDC88BA6NC98 1476 aa16.11■□□□□ 0.17
ATG9A-202ENST00000396761 SMARCA4P51532 1647 aa16.1■□□□□ 0.17
ATG9A-202ENST00000396761 TOP2AP11388 1531 aaKnown RBP16.08■□□□□ 0.17
ATG9A-202ENST00000396761 RANGAP1P46060 587 aaPredicted RBP16.06■□□□□ 0.16
ATG9A-202ENST00000396761 HNRNPUL2Q1KMD3 747 aaKnown RBP16.04■□□□□ 0.16
ATG9A-202ENST00000396761 UNC13AQ9UPW8 1703 aa16.01■□□□□ 0.15
ATG9A-202ENST00000396761 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
ATG9A-202ENST00000396761 SOGA1O94964 1423 aa16■□□□□ 0.15
ATG9A-202ENST00000396761 BCANQ96GW7 911 aa16■□□□□ 0.15
ATG9A-202ENST00000396761 SMARCA2P51531 1590 aa15.99■□□□□ 0.15
ATG9A-202ENST00000396761 BCL11AQ9H165 835 aa15.98■□□□□ 0.15
ATG9A-202ENST00000396761 CEP162Q5TB80 1403 aa15.92■□□□□ 0.14
ATG9A-202ENST00000396761 EIF4G1Q04637 1599 aaKnown RBP15.9■□□□□ 0.14
ATG9A-202ENST00000396761 RUSC2Q8N2Y8 1516 aa15.9■□□□□ 0.14
ATG9A-202ENST00000396761 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
ATG9A-202ENST00000396761 APLP2Q06481 763 aa15.86■□□□□ 0.13
ATG9A-202ENST00000396761 BICRAQ9NZM4 1560 aa15.86■□□□□ 0.13
ATG9A-202ENST00000396761 ANP32EQ9BTT0 268 aa15.85■□□□□ 0.13
ATG9A-202ENST00000396761 BAZ1BQ9UIG0 1483 aaKnown RBP15.83■□□□□ 0.12
ATG9A-202ENST00000396761 SUPT16HQ9Y5B9 1047 aaKnown RBP15.83■□□□□ 0.12
ATG9A-202ENST00000396761 TNIKQ9UKE5 1360 aa15.82■□□□□ 0.12
ATG9A-202ENST00000396761 EEA1Q15075 1411 aa15.8■□□□□ 0.12
ATG9A-202ENST00000396761 GOLGA3Q08378 1498 aa15.78■□□□□ 0.12
ATG9A-202ENST00000396761 TSHZ2Q9NRE2 1034 aa15.77■□□□□ 0.11
ATG9A-202ENST00000396761 ATAD2BQ9ULI0 1458 aa15.77■□□□□ 0.11
ATG9A-202ENST00000396761 CLIP1P30622 1438 aa15.68■□□□□ 0.1
ATG9A-202ENST00000396761 SYNJ1O43426 1573 aa15.67■□□□□ 0.1
ATG9A-202ENST00000396761 CEP164Q9UPV0 1460 aa15.67■□□□□ 0.1
ATG9A-202ENST00000396761 FKBP8Q14318 412 aa15.64■□□□□ 0.09
ATG9A-202ENST00000396761 ITGAEP38570 1179 aa15.64■□□□□ 0.09
ATG9A-202ENST00000396761 ERICH6Q7L0X2 663 aa15.63■□□□□ 0.09
ATG9A-202ENST00000396761 PEG3Q9GZU2 1588 aa15.61■□□□□ 0.09
ATG9A-202ENST00000396761 NEFLP07196 543 aa15.59■□□□□ 0.09
ATG9A-202ENST00000396761 RAPGEF2Q9Y4G8 1499 aa15.58■□□□□ 0.09
ATG9A-202ENST00000396761 KCNH8Q96L42 1107 aa15.55■□□□□ 0.08
ATG9A-202ENST00000396761 VPS8Q8N3P4 1428 aa15.51■□□□□ 0.07
ATG9A-202ENST00000396761 KIF21BO75037 1637 aa15.48■□□□□ 0.07
ATG9A-202ENST00000396761 ATP1B4Q9UN42 357 aaPredicted RBP15.48■□□□□ 0.07
ATG9A-202ENST00000396761 TRIM52Q96A61 297 aa15.47■□□□□ 0.07
ATG9A-202ENST00000396761 RBM19Q9Y4C8 960 aaKnown RBP15.47■□□□□ 0.07
ATG9A-202ENST00000396761 CLSPNQ9HAW4 1339 aa15.44■□□□□ 0.06
ATG9A-202ENST00000396761 TOP2BQ02880 1626 aa15.42■□□□□ 0.06
ATG9A-202ENST00000396761 KIF27Q86VH2 1401 aa15.42■□□□□ 0.06
ATG9A-202ENST00000396761 IRX6P78412 446 aaPredicted RBP15.4■□□□□ 0.06
ATG9A-202ENST00000396761 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
ATG9A-202ENST00000396761 DDX10Q13206 875 aaKnown RBP15.39■□□□□ 0.05
ATG9A-202ENST00000396761 HIRIP3Q9BW71 556 aaPredicted RBP15.38■□□□□ 0.05
ATG9A-202ENST00000396761 KANK4Q5T7N3 995 aaPredicted RBP15.38■□□□□ 0.05
ATG9A-202ENST00000396761 P3H3Q8IVL6 736 aa15.36■□□□□ 0.05
ATG9A-202ENST00000396761 CUX1P39880 1505 aa15.35■□□□□ 0.05
ATG9A-202ENST00000396761 HMGXB3Q12766 1538 aa15.33■□□□□ 0.04
ATG9A-202ENST00000396761 CUX2O14529 1486 aa15.32■□□□□ 0.04
ATG9A-202ENST00000396761 PRXQ9BXM0 1461 aa15.3■□□□□ 0.04
ATG9A-202ENST00000396761 CFTRP13569 1480 aa15.29■□□□□ 0.04
ATG9A-202ENST00000396761 BIVM-ERCC5R4GMW8 1640 aa15.29■□□□□ 0.04
ATG9A-202ENST00000396761 PRKCSHP14314 528 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms