RNA–Protein interactions for RNA: ENST00000554843.5

PSMA6-208, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-208ENST00000554843 NISCHQ9Y2I1 1504 aa35.29■■■■□ 3.24
PSMA6-208ENST00000554843 CCDC180Q9P1Z9 1646 aa31.23■■■□□ 2.59
PSMA6-208ENST00000554843 ABCC9O60706 1549 aa29.93■■■□□ 2.38
PSMA6-208ENST00000554843 ZCCHC6Q5VYS8 1495 aaKnown RBP29.55■■■□□ 2.32
PSMA6-208ENST00000554843 DCAF1Q9Y4B6 1507 aa29.3■■■□□ 2.28
PSMA6-208ENST00000554843 MYO15BQ96JP2 1530 aa29.24■■■□□ 2.27
PSMA6-208ENST00000554843 NACADO15069 1562 aa29.2■■■□□ 2.26
PSMA6-208ENST00000554843 RB1CC1Q8TDY2 1594 aa29.09■■■□□ 2.25
PSMA6-208ENST00000554843 DCAF8L2P0C7V8 631 aa29.06■■■□□ 2.24
PSMA6-208ENST00000554843 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
PSMA6-208ENST00000554843 UNC13AQ9UPW8 1703 aa28.43■■■□□ 2.14
PSMA6-208ENST00000554843 BICRAQ9NZM4 1560 aa28.19■■■□□ 2.1
PSMA6-208ENST00000554843 SHROOM4Q9ULL8 1493 aa28.05■■■□□ 2.08
PSMA6-208ENST00000554843 PABPN1Q86U42 306 aaKnown RBP eCLIP27.97■■■□□ 2.074e-6■□□□□ 9.3
PSMA6-208ENST00000554843 EIF4G1Q04637 1599 aaKnown RBP27.41■■□□□ 1.98
PSMA6-208ENST00000554843 CECR2Q9BXF3 1484 aa27.38■■□□□ 1.97
PSMA6-208ENST00000554843 BAZ1AQ9NRL2 1556 aaPredicted RBP27.34■■□□□ 1.97
PSMA6-208ENST00000554843 SMARCA4P51532 1647 aa27.3■■□□□ 1.96
PSMA6-208ENST00000554843 MROH2BQ7Z745 1585 aa27.18■■□□□ 1.94
PSMA6-208ENST00000554843 CC2D2AQ9P2K1 1620 aa27.14■■□□□ 1.94
PSMA6-208ENST00000554843 PEG3Q9GZU2 1588 aa27.06■■□□□ 1.92
PSMA6-208ENST00000554843 RSF1Q96T23 1441 aaPredicted RBP27.06■■□□□ 1.92
PSMA6-208ENST00000554843 SMARCA2P51531 1590 aa27.02■■□□□ 1.92
PSMA6-208ENST00000554843 ATAD2BQ9ULI0 1458 aa27■■□□□ 1.91
PSMA6-208ENST00000554843 DNAJC5BQ9UF47 199 aa26.92■■□□□ 1.9
PSMA6-208ENST00000554843 NCAPD3P42695 1498 aa26.91■■□□□ 1.9
PSMA6-208ENST00000554843 WIZO95785 1651 aa26.91■■□□□ 1.9
PSMA6-208ENST00000554843 HMGXB3Q12766 1538 aa26.88■■□□□ 1.89
PSMA6-208ENST00000554843 BAZ1BQ9UIG0 1483 aaKnown RBP26.8■■□□□ 1.88
PSMA6-208ENST00000554843 TOP2AP11388 1531 aaKnown RBP26.71■■□□□ 1.87
PSMA6-208ENST00000554843 SUPT5HO00267 1087 aaKnown RBP26.61■■□□□ 1.85
PSMA6-208ENST00000554843 CCDC88BA6NC98 1476 aa26.32■■□□□ 1.8
PSMA6-208ENST00000554843 LAMC3Q9Y6N6 1575 aa26.15■■□□□ 1.78
PSMA6-208ENST00000554843 CADPSQ9ULU8 1353 aa26.12■■□□□ 1.77
PSMA6-208ENST00000554843 CFTRP13569 1480 aa26.11■■□□□ 1.77
PSMA6-208ENST00000554843 NESP48681 1621 aa26.05■■□□□ 1.76
PSMA6-208ENST00000554843 PRDM2Q13029 1718 aa26.01■■□□□ 1.75
PSMA6-208ENST00000554843 PDS5BQ9NTI5 1447 aa25.9■■□□□ 1.74
PSMA6-208ENST00000554843 FANCD2Q9BXW9 1451 aa25.84■■□□□ 1.73
PSMA6-208ENST00000554843 KIF21AQ7Z4S6 1674 aa25.8■■□□□ 1.72
PSMA6-208ENST00000554843 CEP164Q9UPV0 1460 aa25.78■■□□□ 1.72
PSMA6-208ENST00000554843 ERCC6Q03468 1493 aa25.77■■□□□ 1.72
PSMA6-208ENST00000554843 MRC2Q9UBG0 1479 aa25.64■■□□□ 1.69
PSMA6-208ENST00000554843 THOC2Q8NI27 1593 aaKnown RBP25.64■■□□□ 1.69
PSMA6-208ENST00000554843 WDR62O43379 1518 aa25.57■■□□□ 1.68
PSMA6-208ENST00000554843 URB2Q14146 1524 aaKnown RBP25.54■■□□□ 1.68
PSMA6-208ENST00000554843 DNMBPQ6XZF7 1577 aa25.54■■□□□ 1.68
PSMA6-208ENST00000554843 ABCC8Q09428 1581 aa25.53■■□□□ 1.68
PSMA6-208ENST00000554843 WRNQ14191 1432 aaPredicted RBP eCLIP25.51■■□□□ 1.67
PSMA6-208ENST00000554843 TOPBP1Q92547 1522 aa25.49■■□□□ 1.67
PSMA6-208ENST00000554843 CUX1P39880 1505 aa25.48■■□□□ 1.67
PSMA6-208ENST00000554843 BIVM-ERCC5R4GMW8 1640 aa25.44■■□□□ 1.66
PSMA6-208ENST00000554843 TOP2BQ02880 1626 aa25.43■■□□□ 1.66
PSMA6-208ENST00000554843 SYNJ1O43426 1573 aa25.43■■□□□ 1.66
PSMA6-208ENST00000554843 CUX2O14529 1486 aa25.38■■□□□ 1.65
PSMA6-208ENST00000554843 FGD5Q6ZNL6 1462 aa25.32■■□□□ 1.64
PSMA6-208ENST00000554843 POLA1P09884 1462 aaPredicted RBP25.31■■□□□ 1.64
PSMA6-208ENST00000554843 IFT140Q96RY7 1462 aa25.22■■□□□ 1.63
PSMA6-208ENST00000554843 CHIC1Q5VXU3 224 aa25.19■■□□□ 1.62
PSMA6-208ENST00000554843 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
PSMA6-208ENST00000554843 WDR97A6NE52 1622 aa25.15■■□□□ 1.62
PSMA6-208ENST00000554843 SOGA1O94964 1423 aa25.15■■□□□ 1.62
PSMA6-208ENST00000554843 TRIM41Q8WV44 630 aa25.15■■□□□ 1.62
PSMA6-208ENST00000554843 RAD54L2Q9Y4B4 1467 aa25.15■■□□□ 1.62
PSMA6-208ENST00000554843 ABCA10Q8WWZ4 1543 aa25.12■■□□□ 1.61
PSMA6-208ENST00000554843 ZNF608Q9ULD9 1512 aaPredicted RBP25.02■■□□□ 1.6
PSMA6-208ENST00000554843 ABCA5Q8WWZ7 1642 aa25.01■■□□□ 1.59
PSMA6-208ENST00000554843 EIF4G3O43432 1585 aaKnown RBP25■■□□□ 1.59
PSMA6-208ENST00000554843 KIF27Q86VH2 1401 aa24.94■■□□□ 1.58
PSMA6-208ENST00000554843 TDRD9Q8NDG6 1382 aaKnown RBP24.93■■□□□ 1.58
PSMA6-208ENST00000554843 GAPVD1Q14C86 1478 aa24.91■■□□□ 1.58
PSMA6-208ENST00000554843 AQRO60306 1485 aaKnown RBP eCLIP24.9■■□□□ 1.58
PSMA6-208ENST00000554843 PBRM1Q86U86 1689 aa24.87■■□□□ 1.57
PSMA6-208ENST00000554843 GRIN2BQ13224 1484 aa24.85■■□□□ 1.57
PSMA6-208ENST00000554843 ERICH3Q5RHP9 1530 aa24.84■■□□□ 1.57
PSMA6-208ENST00000554843 EEA1Q15075 1411 aa24.84■■□□□ 1.57
PSMA6-208ENST00000554843 RUSC2Q8N2Y8 1516 aa24.8■■□□□ 1.56
PSMA6-208ENST00000554843 MAGI1Q96QZ7 1491 aaPredicted RBP24.77■■□□□ 1.56
PSMA6-208ENST00000554843 SNAPC4Q5SXM2 1469 aa24.75■■□□□ 1.55
PSMA6-208ENST00000554843 CUL7Q14999 1698 aa24.73■■□□□ 1.55
PSMA6-208ENST00000554843 ADAMTS12P58397 1594 aa24.73■■□□□ 1.55
PSMA6-208ENST00000554843 IGF1RP08069 1367 aa24.72■■□□□ 1.55
PSMA6-208ENST00000554843 FHAD1B1AJZ9 1412 aa24.66■■□□□ 1.54
PSMA6-208ENST00000554843 SYNJ2O15056 1496 aa24.64■■□□□ 1.54
PSMA6-208ENST00000554843 CSRNP3Q8WYN3 585 aa24.61■■□□□ 1.53
PSMA6-208ENST00000554843 PRXQ9BXM0 1461 aa24.6■■□□□ 1.53
PSMA6-208ENST00000554843 CARMIL1Q5VZK9 1371 aa24.59■■□□□ 1.53
PSMA6-208ENST00000554843 CHD1O14646 1710 aa24.56■■□□□ 1.52
PSMA6-208ENST00000554843 FAM9AQ8IZU1 332 aaPredicted RBP24.56■■□□□ 1.52
PSMA6-208ENST00000554843 KIF21BO75037 1637 aa24.55■■□□□ 1.52
PSMA6-208ENST00000554843 GRIN2AQ12879 1464 aa24.55■■□□□ 1.52
PSMA6-208ENST00000554843 RAPGEF2Q9Y4G8 1499 aa24.54■■□□□ 1.52
PSMA6-208ENST00000554843 CHMP7Q8WUX9 453 aaPredicted RBP24.49■■□□□ 1.51
PSMA6-208ENST00000554843 NUP160Q12769 1436 aa24.44■■□□□ 1.5
PSMA6-208ENST00000554843 FBLN2P98095 1184 aa24.43■■□□□ 1.5
PSMA6-208ENST00000554843 GOLGA3Q08378 1498 aa24.42■■□□□ 1.5
PSMA6-208ENST00000554843 CEP170Q5SW79 1584 aa24.4■■□□□ 1.5
PSMA6-208ENST00000554843 CLASP1Q7Z460 1538 aa24.35■■□□□ 1.49
PSMA6-208ENST00000554843 CTTNBP2Q8WZ74 1663 aa24.33■■□□□ 1.49
PSMA6-208ENST00000554843 KIAA0586Q9BVV6 1533 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms