RNA–Protein interactions for RNA: ENST00000424155.6

TMED3-202, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 3 BASIC

Gene TMED3, Length 16,555 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-202ENST00000424155 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
TMED3-202ENST00000424155 MYT1Q01538 1121 aa11.03□□□□□ -0.64
TMED3-202ENST00000424155 TTBK1Q5TCY1 1321 aaPredicted RBP10.16□□□□□ -0.78
TMED3-202ENST00000424155 PCGF6Q9BYE7 350 aa10.1□□□□□ -0.79
TMED3-202ENST00000424155 HRCP23327 699 aa10.06□□□□□ -0.8
TMED3-202ENST00000424155 CENPBP07199 599 aaPredicted RBP10.01□□□□□ -0.81
TMED3-202ENST00000424155 ERICH6Q7L0X2 663 aa10.01□□□□□ -0.81
TMED3-202ENST00000424155 ZEB1P37275 1124 aaPredicted RBP9.86□□□□□ -0.83
TMED3-202ENST00000424155 SUPT5HO00267 1087 aaKnown RBP9.84□□□□□ -0.83
TMED3-202ENST00000424155 PPARGC1BQ86YN6 1023 aaKnown RBP9.84□□□□□ -0.83
TMED3-202ENST00000424155 CCER1Q8TC90 406 aaPredicted RBP9.81□□□□□ -0.84
TMED3-202ENST00000424155 DCAF8L2P0C7V8 631 aa9.73□□□□□ -0.85
TMED3-202ENST00000424155 GTF3C3Q9Y5Q9 886 aa9.66□□□□□ -0.86
TMED3-202ENST00000424155 YTHDC1Q96MU7 727 aaKnown RBP9.63□□□□□ -0.87
TMED3-202ENST00000424155 BCL11AQ9H165 835 aa9.62□□□□□ -0.87
TMED3-202ENST00000424155 SCAF1Q9H7N4 1312 aaKnown RBP9.58□□□□□ -0.88
TMED3-202ENST00000424155 EHMT2Q96KQ7 1210 aa9.58□□□□□ -0.88
TMED3-202ENST00000424155 ACIN1Q9UKV3 1341 aaKnown RBP9.56□□□□□ -0.88
TMED3-202ENST00000424155 NEFLP07196 543 aa9.53□□□□□ -0.88
TMED3-202ENST00000424155 TRIM26Q12899 539 aaPredicted RBP9.42□□□□□ -0.9
TMED3-202ENST00000424155 EIF5BO60841 1220 aaKnown RBP9.41□□□□□ -0.9
TMED3-202ENST00000424155 DIEXFQ68CQ4 756 aaKnown RBP9.38□□□□□ -0.91
TMED3-202ENST00000424155 NEUROD1Q13562 356 aa9.36□□□□□ -0.91
TMED3-202ENST00000424155 ANP32EQ9BTT0 268 aa9.36□□□□□ -0.91
TMED3-202ENST00000424155 APLP2Q06481 763 aa9.33□□□□□ -0.92
TMED3-202ENST00000424155 SLC24A1O60721 1099 aa9.32□□□□□ -0.92
TMED3-202ENST00000424155 FAM9AQ8IZU1 332 aaPredicted RBP9.32□□□□□ -0.92
TMED3-202ENST00000424155 DAXXQ9UER7 740 aaPredicted RBP9.31□□□□□ -0.92
TMED3-202ENST00000424155 RTL5Q5HYW3 569 aaPredicted RBP9.3□□□□□ -0.92
TMED3-202ENST00000424155 PRKCSHP14314 528 aaPredicted RBP9.29□□□□□ -0.92
TMED3-202ENST00000424155 GLIPR1L2Q4G1C9 344 aa9.27□□□□□ -0.93
TMED3-202ENST00000424155 SHROOM4Q9ULL8 1493 aa9.26□□□□□ -0.93
TMED3-202ENST00000424155 MYT1LQ9UL68 1186 aa9.24□□□□□ -0.93
TMED3-202ENST00000424155 LOC105371045A0A1W2PR82 267 aa9.18□□□□□ -0.94
TMED3-202ENST00000424155 BCANQ96GW7 911 aa9.18□□□□□ -0.94
TMED3-202ENST00000424155 CDK11AQ9UQ88 783 aaPredicted RBP9.18□□□□□ -0.94
TMED3-202ENST00000424155 CSRNP3Q8WYN3 585 aa9.15□□□□□ -0.94
TMED3-202ENST00000424155 RANGAP1P46060 587 aaPredicted RBP9.11□□□□□ -0.95
TMED3-202ENST00000424155 ZNF316A6NFI3 1004 aaPredicted RBP9.06□□□□□ -0.96
TMED3-202ENST00000424155 TRIM41Q8WV44 630 aa9.03□□□□□ -0.96
TMED3-202ENST00000424155 NBR1Q14596 966 aa9.03□□□□□ -0.96
TMED3-202ENST00000424155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.02□□□□□ -0.97
TMED3-202ENST00000424155 DEKP35659 375 aaKnown RBP9.01□□□□□ -0.97
TMED3-202ENST00000424155 ANO8Q9HCE9 1232 aaPredicted RBP9□□□□□ -0.97
TMED3-202ENST00000424155 CCDC136Q96JN2 1154 aa8.99□□□□□ -0.97
TMED3-202ENST00000424155 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.98
TMED3-202ENST00000424155 FKBP8Q14318 412 aa8.94□□□□□ -0.98
TMED3-202ENST00000424155 MIER1Q8N108 512 aa8.93□□□□□ -0.98
TMED3-202ENST00000424155 CHIC1Q5VXU3 224 aa8.92□□□□□ -0.98
TMED3-202ENST00000424155 CLSPNQ9HAW4 1339 aa8.92□□□□□ -0.98
TMED3-202ENST00000424155 UBTFP17480 764 aaKnown RBP8.91□□□□□ -0.98
TMED3-202ENST00000424155 ANP32AP39687 249 aaKnown RBP8.9□□□□□ -0.98
TMED3-202ENST00000424155 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.9□□□□□ -0.98
TMED3-202ENST00000424155 PODXL2Q9NZ53 605 aa8.89□□□□□ -0.99
TMED3-202ENST00000424155 ZBTB47Q9UFB7 747 aaPredicted RBP8.89□□□□□ -0.99
TMED3-202ENST00000424155 ITGAEP38570 1179 aa8.89□□□□□ -0.99
TMED3-202ENST00000424155 ERICH6BQ5W0A0 696 aa8.88□□□□□ -0.99
TMED3-202ENST00000424155 HNRNPUL2Q1KMD3 747 aaKnown RBP8.88□□□□□ -0.99
TMED3-202ENST00000424155 TSHZ2Q9NRE2 1034 aa8.88□□□□□ -0.99
TMED3-202ENST00000424155 RBM19Q9Y4C8 960 aaKnown RBP8.87□□□□□ -0.99
TMED3-202ENST00000424155 VSIG10Q8N0Z9 540 aa8.83□□□□□ -1
TMED3-202ENST00000424155 TNNT2P45379 298 aaPredicted RBP8.82□□□□□ -1
TMED3-202ENST00000424155 PKNOX2Q96KN3 472 aa8.8□□□□□ -1
TMED3-202ENST00000424155 CNGB1Q14028 1251 aaPredicted RBP8.8□□□□□ -1
TMED3-202ENST00000424155 SUPT16HQ9Y5B9 1047 aaKnown RBP8.79□□□□□ -1
TMED3-202ENST00000424155 ATP1B4Q9UN42 357 aaPredicted RBP8.78□□□□□ -1
TMED3-202ENST00000424155 POLR3GLQ9BT43 218 aa8.78□□□□□ -1
TMED3-202ENST00000424155 ANP32CO43423 234 aa8.78□□□□□ -1
TMED3-202ENST00000424155 NPM2Q86SE8 214 aaKnown RBP8.77□□□□□ -1.01
TMED3-202ENST00000424155 SALL2Q9Y467 1007 aaPredicted RBP8.76□□□□□ -1.01
TMED3-202ENST00000424155 RSPH6AQ9H0K4 717 aa8.73□□□□□ -1.01
TMED3-202ENST00000424155 ANP32BQ92688 251 aaKnown RBP8.72□□□□□ -1.01
TMED3-202ENST00000424155 NEFMP07197 916 aa8.72□□□□□ -1.01
TMED3-202ENST00000424155 NCLP19338 710 aaKnown RBP8.72□□□□□ -1.01
TMED3-202ENST00000424155 UBE2Q2Q8WVN8 375 aa8.72□□□□□ -1.01
TMED3-202ENST00000424155 HSP90AA1P07900 732 aaKnown RBP8.72□□□□□ -1.01
TMED3-202ENST00000424155 A0A0U1RQG5 324 aaPredicted RBP8.71□□□□□ -1.01
TMED3-202ENST00000424155 NAP1L5Q96NT1 182 aaPredicted RBP8.71□□□□□ -1.02
TMED3-202ENST00000424155 NOP58Q9Y2X3 529 aaKnown RBP8.69□□□□□ -1.02
TMED3-202ENST00000424155 PLEKHG5O94827 1062 aa8.66□□□□□ -1.02
TMED3-202ENST00000424155 HSP90AA2PQ14568 343 aaPredicted RBP8.65□□□□□ -1.02
TMED3-202ENST00000424155 TIMELESSQ9UNS1 1208 aa8.63□□□□□ -1.03
TMED3-202ENST00000424155 PDE4CQ08493 712 aa8.61□□□□□ -1.03
TMED3-202ENST00000424155 ARXQ96QS3 562 aa8.61□□□□□ -1.03
TMED3-202ENST00000424155 PPM1GO15355 546 aaPredicted RBP8.6□□□□□ -1.03
TMED3-202ENST00000424155 LAS1LQ9Y4W2 734 aaKnown RBP8.59□□□□□ -1.03
TMED3-202ENST00000424155 IRX6P78412 446 aaPredicted RBP8.58□□□□□ -1.04
TMED3-202ENST00000424155 ZMYND15Q9H091 742 aa8.57□□□□□ -1.04
TMED3-202ENST00000424155 TRIM52Q96A61 297 aa8.55□□□□□ -1.04
TMED3-202ENST00000424155 DDX10Q13206 875 aaKnown RBP8.54□□□□□ -1.04
TMED3-202ENST00000424155 HNRNPUQ00839 825 aaKnown RBP eCLIP8.54□□□□□ -1.04
TMED3-202ENST00000424155 PNNQ9H307 717 aaKnown RBP8.54□□□□□ -1.04
TMED3-202ENST00000424155 AMER1Q5JTC6 1135 aaPredicted RBP8.53□□□□□ -1.04
TMED3-202ENST00000424155 TRIM44Q96DX7 344 aaPredicted RBP8.53□□□□□ -1.04
TMED3-202ENST00000424155 ZNF326Q5BKZ1 582 aaKnown RBP8.53□□□□□ -1.04
TMED3-202ENST00000424155 PPP4R2Q9NY27 417 aa8.53□□□□□ -1.04
TMED3-202ENST00000424155 IL27Q8NEV9 243 aa8.53□□□□□ -1.04
TMED3-202ENST00000424155 DDRGK1Q96HY6 314 aa8.52□□□□□ -1.05
TMED3-202ENST00000424155 CDK11BP21127 795 aaKnown RBP8.5□□□□□ -1.05
TMED3-202ENST00000424155 FANCIQ9NVI1 1328 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms