RNA–Protein interactions for RNA: ENST00000390015.7

GAA-202, Transcript of glucosidase alpha, acid, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAA, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAA-202ENST00000390015 NISCHQ9Y2I1 1504 aa22.69■■□□□ 1.22
GAA-202ENST00000390015 SHROOM4Q9ULL8 1493 aa20.37■□□□□ 0.85
GAA-202ENST00000390015 DCAF8L2P0C7V8 631 aa20.35■□□□□ 0.85
GAA-202ENST00000390015 SUPT5HO00267 1087 aaKnown RBP19.85■□□□□ 0.77
GAA-202ENST00000390015 HRCP23327 699 aa19.27■□□□□ 0.68
GAA-202ENST00000390015 PPARGC1BQ86YN6 1023 aaKnown RBP19.16■□□□□ 0.66
GAA-202ENST00000390015 PCGF6Q9BYE7 350 aa19.11■□□□□ 0.65
GAA-202ENST00000390015 CCDC180Q9P1Z9 1646 aa19.04■□□□□ 0.64
GAA-202ENST00000390015 ZCCHC6Q5VYS8 1495 aaKnown RBP19.03■□□□□ 0.64
GAA-202ENST00000390015 ABCC9O60706 1549 aa18.89■□□□□ 0.61
GAA-202ENST00000390015 EHMT2Q96KQ7 1210 aa18.88■□□□□ 0.61
GAA-202ENST00000390015 MYO15BQ96JP2 1530 aa18.75■□□□□ 0.59
GAA-202ENST00000390015 PELP1Q8IZL8 1130 aaKnown RBP18.71■□□□□ 0.59
GAA-202ENST00000390015 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
GAA-202ENST00000390015 FAM9AQ8IZU1 332 aaPredicted RBP18.56■□□□□ 0.56
GAA-202ENST00000390015 SCRIBQ14160 1630 aa18.54■□□□□ 0.56
GAA-202ENST00000390015 LOC105371045A0A1W2PR82 267 aa18.53■□□□□ 0.56
GAA-202ENST00000390015 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.539e-7■■□□□ 12.1
GAA-202ENST00000390015 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
GAA-202ENST00000390015 DCAF1Q9Y4B6 1507 aa18.29■□□□□ 0.52
GAA-202ENST00000390015 TRIM26Q12899 539 aaPredicted RBP18.24■□□□□ 0.51
GAA-202ENST00000390015 TRIM41Q8WV44 630 aa18.15■□□□□ 0.5
GAA-202ENST00000390015 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
GAA-202ENST00000390015 MYT1Q01538 1121 aa18.15■□□□□ 0.5
GAA-202ENST00000390015 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.49
GAA-202ENST00000390015 RSF1Q96T23 1441 aaPredicted RBP18.07■□□□□ 0.48
GAA-202ENST00000390015 ZEB1P37275 1124 aaPredicted RBP18.01■□□□□ 0.47
GAA-202ENST00000390015 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
GAA-202ENST00000390015 MROH2BQ7Z745 1585 aa17.88■□□□□ 0.45
GAA-202ENST00000390015 NEUROD1Q13562 356 aa17.88■□□□□ 0.45
GAA-202ENST00000390015 RANGAP1P46060 587 aaPredicted RBP17.86■□□□□ 0.45
GAA-202ENST00000390015 ACIN1Q9UKV3 1341 aaKnown RBP17.83■□□□□ 0.44
GAA-202ENST00000390015 GTF3C3Q9Y5Q9 886 aa17.82■□□□□ 0.44
GAA-202ENST00000390015 WIZO95785 1651 aa17.76■□□□□ 0.43
GAA-202ENST00000390015 NACADO15069 1562 aa17.75■□□□□ 0.43
GAA-202ENST00000390015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.71■□□□□ 0.42
GAA-202ENST00000390015 CCER1Q8TC90 406 aaPredicted RBP17.64■□□□□ 0.41
GAA-202ENST00000390015 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
GAA-202ENST00000390015 DIEXFQ68CQ4 756 aaKnown RBP17.58■□□□□ 0.41
GAA-202ENST00000390015 YTHDC1Q96MU7 727 aaKnown RBP17.58■□□□□ 0.4
GAA-202ENST00000390015 ABCC8Q09428 1581 aa17.51■□□□□ 0.39
GAA-202ENST00000390015 UBTFP17480 764 aaKnown RBP17.51■□□□□ 0.39
GAA-202ENST00000390015 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
GAA-202ENST00000390015 BAZ1AQ9NRL2 1556 aaPredicted RBP17.38■□□□□ 0.37
GAA-202ENST00000390015 UNC13AQ9UPW8 1703 aa17.36■□□□□ 0.37
GAA-202ENST00000390015 SOGA1O94964 1423 aa17.34■□□□□ 0.37
GAA-202ENST00000390015 RUSC2Q8N2Y8 1516 aa17.31■□□□□ 0.36
GAA-202ENST00000390015 SMARCA4P51532 1647 aa17.29■□□□□ 0.36
GAA-202ENST00000390015 BICRAQ9NZM4 1560 aa17.26■□□□□ 0.35
GAA-202ENST00000390015 CSRNP3Q8WYN3 585 aa17.18■□□□□ 0.34
GAA-202ENST00000390015 SMARCA2P51531 1590 aa17.16■□□□□ 0.34
GAA-202ENST00000390015 ZNF316A6NFI3 1004 aaPredicted RBP17.16■□□□□ 0.34
GAA-202ENST00000390015 MIER1Q8N108 512 aa17.16■□□□□ 0.34
GAA-202ENST00000390015 TOP2AP11388 1531 aaKnown RBP17.15■□□□□ 0.34
GAA-202ENST00000390015 BAZ1BQ9UIG0 1483 aaKnown RBP17.11■□□□□ 0.33
GAA-202ENST00000390015 HNRNPUL2Q1KMD3 747 aaKnown RBP17.11■□□□□ 0.33
GAA-202ENST00000390015 EIF4G1Q04637 1599 aaKnown RBP17.08■□□□□ 0.32
GAA-202ENST00000390015 ATAD2BQ9ULI0 1458 aa17.07■□□□□ 0.32
GAA-202ENST00000390015 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
GAA-202ENST00000390015 WRNQ14191 1432 aaPredicted RBP eCLIP17.05■□□□□ 0.32
GAA-202ENST00000390015 BCL11AQ9H165 835 aa17.03■□□□□ 0.32
GAA-202ENST00000390015 ATP1B4Q9UN42 357 aaPredicted RBP17.03■□□□□ 0.32
GAA-202ENST00000390015 ITGAEP38570 1179 aa16.98■□□□□ 0.31
GAA-202ENST00000390015 CEP162Q5TB80 1403 aa16.98■□□□□ 0.31
GAA-202ENST00000390015 P3H3Q8IVL6 736 aa16.97■□□□□ 0.31
GAA-202ENST00000390015 APLP2Q06481 763 aa16.91■□□□□ 0.3
GAA-202ENST00000390015 SYNJ1O43426 1573 aa16.89■□□□□ 0.29
GAA-202ENST00000390015 SUPT16HQ9Y5B9 1047 aaKnown RBP16.85■□□□□ 0.29
GAA-202ENST00000390015 RAPGEF2Q9Y4G8 1499 aa16.81■□□□□ 0.28
GAA-202ENST00000390015 ANP32EQ9BTT0 268 aa16.8■□□□□ 0.28
GAA-202ENST00000390015 PRKCSHP14314 528 aaPredicted RBP16.8■□□□□ 0.28
GAA-202ENST00000390015 BCANQ96GW7 911 aa16.8■□□□□ 0.28
GAA-202ENST00000390015 TSHZ2Q9NRE2 1034 aa16.79■□□□□ 0.28
GAA-202ENST00000390015 ARID3CA6NKF2 412 aa16.78■□□□□ 0.28
GAA-202ENST00000390015 CLIP1P30622 1438 aa16.74■□□□□ 0.27
GAA-202ENST00000390015 TNIKQ9UKE5 1360 aa16.74■□□□□ 0.27
GAA-202ENST00000390015 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
GAA-202ENST00000390015 GOLGA3Q08378 1498 aa16.72■□□□□ 0.27
GAA-202ENST00000390015 KANK4Q5T7N3 995 aaPredicted RBP16.71■□□□□ 0.27
GAA-202ENST00000390015 NESP48681 1621 aa16.68■□□□□ 0.26
GAA-202ENST00000390015 CEP164Q9UPV0 1460 aa16.6■□□□□ 0.25
GAA-202ENST00000390015 CUX2O14529 1486 aa16.59■□□□□ 0.25
GAA-202ENST00000390015 NCAPD3P42695 1498 aa16.59■□□□□ 0.25
GAA-202ENST00000390015 CUX1P39880 1505 aa16.58■□□□□ 0.25
GAA-202ENST00000390015 KCNH8Q96L42 1107 aa16.56■□□□□ 0.24
GAA-202ENST00000390015 CC2D2AQ9P2K1 1620 aa16.56■□□□□ 0.24
GAA-202ENST00000390015 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
GAA-202ENST00000390015 FAM50AQ14320 339 aaKnown RBP16.53■□□□□ 0.24
GAA-202ENST00000390015 EEA1Q15075 1411 aa16.53■□□□□ 0.24
GAA-202ENST00000390015 FKBP8Q14318 412 aa16.53■□□□□ 0.24
GAA-202ENST00000390015 CADPSQ9ULU8 1353 aa16.52■□□□□ 0.24
GAA-202ENST00000390015 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
GAA-202ENST00000390015 CLSPNQ9HAW4 1339 aa16.51■□□□□ 0.23
GAA-202ENST00000390015 KIF27Q86VH2 1401 aa16.49■□□□□ 0.23
GAA-202ENST00000390015 CFTRP13569 1480 aa16.46■□□□□ 0.23
GAA-202ENST00000390015 FBLN2P98095 1184 aa16.45■□□□□ 0.22
GAA-202ENST00000390015 VPS8Q8N3P4 1428 aa16.44■□□□□ 0.22
GAA-202ENST00000390015 FGD5Q6ZNL6 1462 aa16.43■□□□□ 0.22
GAA-202ENST00000390015 TOP2BQ02880 1626 aa16.43■□□□□ 0.22
GAA-202ENST00000390015 CARMIL1Q5VZK9 1371 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms