RNA–Protein interactions for RNA: ENST00000409618.5

ATG9A-205, Transcript of autophagy related 9A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATG9A, Length 4,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-205ENST00000409618 NISCHQ9Y2I1 1504 aa31.34■■■□□ 2.61
ATG9A-205ENST00000409618 DCAF8L2P0C7V8 631 aa28.69■■■□□ 2.18
ATG9A-205ENST00000409618 SHROOM4Q9ULL8 1493 aa28.39■■■□□ 2.13
ATG9A-205ENST00000409618 SUPT5HO00267 1087 aaKnown RBP27.91■■■□□ 2.06
ATG9A-205ENST00000409618 EHMT2Q96KQ7 1210 aa26.52■■□□□ 1.84
ATG9A-205ENST00000409618 ZCCHC6Q5VYS8 1495 aaKnown RBP26.22■■□□□ 1.79
ATG9A-205ENST00000409618 ABCC9O60706 1549 aa26.14■■□□□ 1.78
ATG9A-205ENST00000409618 FAM9AQ8IZU1 332 aaPredicted RBP26.1■■□□□ 1.77
ATG9A-205ENST00000409618 CHIC1Q5VXU3 224 aa26.01■■□□□ 1.75
ATG9A-205ENST00000409618 CCDC180Q9P1Z9 1646 aa25.98■■□□□ 1.75
ATG9A-205ENST00000409618 LOC105371045A0A1W2PR82 267 aa25.86■■□□□ 1.73
ATG9A-205ENST00000409618 PCGF6Q9BYE7 350 aa25.73■■□□□ 1.71
ATG9A-205ENST00000409618 TRIM41Q8WV44 630 aa25.6■■□□□ 1.69
ATG9A-205ENST00000409618 SCRIBQ14160 1630 aa25.57■■□□□ 1.68
ATG9A-205ENST00000409618 PABPN1Q86U42 306 aaKnown RBP eCLIP25.52■■□□□ 1.68
ATG9A-205ENST00000409618 TTBK1Q5TCY1 1321 aaPredicted RBP25.45■■□□□ 1.67
ATG9A-205ENST00000409618 PPARGC1BQ86YN6 1023 aaKnown RBP25.4■■□□□ 1.66
ATG9A-205ENST00000409618 MYO15BQ96JP2 1530 aa25.39■■□□□ 1.65
ATG9A-205ENST00000409618 RANGAP1P46060 587 aaPredicted RBP25.15■■□□□ 1.62
ATG9A-205ENST00000409618 RSF1Q96T23 1441 aaPredicted RBP25■■□□□ 1.59
ATG9A-205ENST00000409618 CECR2Q9BXF3 1484 aa24.97■■□□□ 1.59
ATG9A-205ENST00000409618 DCAF1Q9Y4B6 1507 aa24.93■■□□□ 1.58
ATG9A-205ENST00000409618 UBTFP17480 764 aaKnown RBP24.78■■□□□ 1.56
ATG9A-205ENST00000409618 HRCP23327 699 aa24.72■■□□□ 1.55
ATG9A-205ENST00000409618 RB1CC1Q8TDY2 1594 aa24.63■■□□□ 1.53
ATG9A-205ENST00000409618 TRIM26Q12899 539 aaPredicted RBP24.62■■□□□ 1.53
ATG9A-205ENST00000409618 MROH2BQ7Z745 1585 aa24.61■■□□□ 1.53
ATG9A-205ENST00000409618 NACADO15069 1562 aa24.58■■□□□ 1.53
ATG9A-205ENST00000409618 WIZO95785 1651 aa24.39■■□□□ 1.5
ATG9A-205ENST00000409618 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.33■■□□□ 1.49
ATG9A-205ENST00000409618 CCER1Q8TC90 406 aaPredicted RBP24.32■■□□□ 1.48
ATG9A-205ENST00000409618 APLP2Q06481 763 aa24.24■■□□□ 1.47
ATG9A-205ENST00000409618 ATP1B4Q9UN42 357 aaPredicted RBP24.16■■□□□ 1.46
ATG9A-205ENST00000409618 HNRNPUL2Q1KMD3 747 aaKnown RBP24.14■■□□□ 1.46
ATG9A-205ENST00000409618 ABCC8Q09428 1581 aa24.14■■□□□ 1.46
ATG9A-205ENST00000409618 CSRNP3Q8WYN3 585 aa24.13■■□□□ 1.45
ATG9A-205ENST00000409618 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
ATG9A-205ENST00000409618 CCDC88BA6NC98 1476 aa24.05■■□□□ 1.44
ATG9A-205ENST00000409618 SOGA1O94964 1423 aa24.01■■□□□ 1.43
ATG9A-205ENST00000409618 ITGAEP38570 1179 aa23.98■■□□□ 1.43
ATG9A-205ENST00000409618 ZEB1P37275 1124 aaPredicted RBP23.83■■□□□ 1.41
ATG9A-205ENST00000409618 RUSC2Q8N2Y8 1516 aa23.83■■□□□ 1.41
ATG9A-205ENST00000409618 SMARCA4P51532 1647 aa23.81■■□□□ 1.4
ATG9A-205ENST00000409618 BAZ1BQ9UIG0 1483 aaKnown RBP23.8■■□□□ 1.4
ATG9A-205ENST00000409618 P3H3Q8IVL6 736 aa23.79■■□□□ 1.4
ATG9A-205ENST00000409618 WRNQ14191 1432 aaPredicted RBP eCLIP23.77■■□□□ 1.39
ATG9A-205ENST00000409618 TOP2AP11388 1531 aaKnown RBP23.71■■□□□ 1.39
ATG9A-205ENST00000409618 CEP162Q5TB80 1403 aa23.69■■□□□ 1.38
ATG9A-205ENST00000409618 SMARCA2P51531 1590 aa23.61■■□□□ 1.37
ATG9A-205ENST00000409618 YTHDC1Q96MU7 727 aaKnown RBP23.6■■□□□ 1.37
ATG9A-205ENST00000409618 ATAD2BQ9ULI0 1458 aa23.58■■□□□ 1.37
ATG9A-205ENST00000409618 UNC13AQ9UPW8 1703 aa23.53■■□□□ 1.36
ATG9A-205ENST00000409618 BICRAQ9NZM4 1560 aa23.53■■□□□ 1.36
ATG9A-205ENST00000409618 ARID3CA6NKF2 412 aa23.5■■□□□ 1.35
ATG9A-205ENST00000409618 CLIP1P30622 1438 aa23.45■■□□□ 1.34
ATG9A-205ENST00000409618 TNIKQ9UKE5 1360 aa23.41■■□□□ 1.34
ATG9A-205ENST00000409618 GOLGA3Q08378 1498 aa23.38■■□□□ 1.33
ATG9A-205ENST00000409618 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
ATG9A-205ENST00000409618 DIEXFQ68CQ4 756 aaKnown RBP23.34■■□□□ 1.33
ATG9A-205ENST00000409618 RAPGEF2Q9Y4G8 1499 aa23.29■■□□□ 1.32
ATG9A-205ENST00000409618 DNAJC5BQ9UF47 199 aa23.27■■□□□ 1.32
ATG9A-205ENST00000409618 KANK4Q5T7N3 995 aaPredicted RBP23.23■■□□□ 1.31
ATG9A-205ENST00000409618 EEA1Q15075 1411 aa23.22■■□□□ 1.31
ATG9A-205ENST00000409618 CEP164Q9UPV0 1460 aa23.22■■□□□ 1.31
ATG9A-205ENST00000409618 SYNJ1O43426 1573 aa23.21■■□□□ 1.31
ATG9A-205ENST00000409618 FBLN2P98095 1184 aa23.18■■□□□ 1.3
ATG9A-205ENST00000409618 NEUROD1Q13562 356 aa23.18■■□□□ 1.3
ATG9A-205ENST00000409618 EIF4G1Q04637 1599 aaKnown RBP23.14■■□□□ 1.29
ATG9A-205ENST00000409618 CUX2O14529 1486 aa23.11■■□□□ 1.29
ATG9A-205ENST00000409618 KIF27Q86VH2 1401 aa23.1■■□□□ 1.29
ATG9A-205ENST00000409618 ZNF316A6NFI3 1004 aaPredicted RBP23■■□□□ 1.27
ATG9A-205ENST00000409618 CADPSQ9ULU8 1353 aa22.98■■□□□ 1.27
ATG9A-205ENST00000409618 TDRD9Q8NDG6 1382 aaKnown RBP22.97■■□□□ 1.27
ATG9A-205ENST00000409618 VPS8Q8N3P4 1428 aa22.95■■□□□ 1.27
ATG9A-205ENST00000409618 CENPBP07199 599 aaPredicted RBP22.95■■□□□ 1.26
ATG9A-205ENST00000409618 CARMIL1Q5VZK9 1371 aa22.95■■□□□ 1.26
ATG9A-205ENST00000409618 NCAPD3P42695 1498 aa22.95■■□□□ 1.26
ATG9A-205ENST00000409618 CNGB1Q14028 1251 aaPredicted RBP22.93■■□□□ 1.26
ATG9A-205ENST00000409618 HIRIP3Q9BW71 556 aaPredicted RBP22.93■■□□□ 1.26
ATG9A-205ENST00000409618 NESP48681 1621 aa22.92■■□□□ 1.26
ATG9A-205ENST00000409618 CHIC2Q9UKJ5 165 aa22.89■■□□□ 1.25
ATG9A-205ENST00000409618 RAD54L2Q9Y4B4 1467 aa22.85■■□□□ 1.25
ATG9A-205ENST00000409618 CUX1P39880 1505 aa22.82■■□□□ 1.24
ATG9A-205ENST00000409618 MIER1Q8N108 512 aa22.82■■□□□ 1.24
ATG9A-205ENST00000409618 TRIM52Q96A61 297 aa22.8■■□□□ 1.24
ATG9A-205ENST00000409618 GTF3C3Q9Y5Q9 886 aa22.79■■□□□ 1.24
ATG9A-205ENST00000409618 IGF1RP08069 1367 aa22.78■■□□□ 1.24
ATG9A-205ENST00000409618 SCAF1Q9H7N4 1312 aaKnown RBP22.77■■□□□ 1.24
ATG9A-205ENST00000409618 FANCD2Q9BXW9 1451 aa22.77■■□□□ 1.23
ATG9A-205ENST00000409618 FGD5Q6ZNL6 1462 aa22.76■■□□□ 1.23
ATG9A-205ENST00000409618 SIN3AQ96ST3 1273 aa22.76■■□□□ 1.23
ATG9A-205ENST00000409618 PEG3Q9GZU2 1588 aa22.76■■□□□ 1.23
ATG9A-205ENST00000409618 CFTRP13569 1480 aa22.75■■□□□ 1.23
ATG9A-205ENST00000409618 CC2D2AQ9P2K1 1620 aa22.74■■□□□ 1.23
ATG9A-205ENST00000409618 KIF21BO75037 1637 aa22.71■■□□□ 1.23
ATG9A-205ENST00000409618 ZNF777Q9ULD5 760 aaPredicted RBP22.71■■□□□ 1.23
ATG9A-205ENST00000409618 FHOD3Q2V2M9 1422 aa22.71■■□□□ 1.23
ATG9A-205ENST00000409618 ARAP1Q96P48 1450 aa22.69■■□□□ 1.22
ATG9A-205ENST00000409618 POLR3GLQ9BT43 218 aa22.68■■□□□ 1.22
ATG9A-205ENST00000409618 RRP7BPQ9NSQ0 103 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms