RNA–Protein interactions for RNA: ENST00000513314.1

DHFR-207, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-207ENST00000513314 AEBP2Q6ZN18 517 aaPredicted RBP29.02■■■□□ 2.24
DHFR-207ENST00000513314 CHIC1Q5VXU3 224 aa27.62■■■□□ 2.01
DHFR-207ENST00000513314 SENP3Q9H4L4 574 aaPredicted RBP24.77■■□□□ 1.56
DHFR-207ENST00000513314 PHF23Q9BUL5 403 aaPredicted RBP24.44■■□□□ 1.5
DHFR-207ENST00000513314 FOXD1Q16676 465 aa23.06■■□□□ 1.28
DHFR-207ENST00000513314 PLPPR3Q6T4P5 718 aa22.13■■□□□ 1.13
DHFR-207ENST00000513314 MSH5O43196 834 aa21.59■■□□□ 1.05
DHFR-207ENST00000513314 PPP6R1Q9UPN7 881 aa21.59■■□□□ 1.05
DHFR-207ENST00000513314 PIAS4Q8N2W9 510 aaPredicted RBP21.53■■□□□ 1.04
DHFR-207ENST00000513314 ADRA2BP18089 450 aa21.51■■□□□ 1.03
DHFR-207ENST00000513314 POTEDQ86YR6 584 aa20.98■□□□□ 0.95
DHFR-207ENST00000513314 MAPK8IP2Q13387 824 aaPredicted RBP19.74■□□□□ 0.75
DHFR-207ENST00000513314 SCAF1Q9H7N4 1312 aaKnown RBP19.72■□□□□ 0.75
DHFR-207ENST00000513314 DMRT2Q9Y5R5 561 aa19.65■□□□□ 0.74
DHFR-207ENST00000513314 PPP4R3CPQ6ZMV5 832 aa19.42■□□□□ 0.7
DHFR-207ENST00000513314 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
DHFR-207ENST00000513314 HOXD11P31277 338 aaPredicted RBP18.96■□□□□ 0.63
DHFR-207ENST00000513314 RNF216Q9NWF9 866 aaPredicted RBP18.82■□□□□ 0.6
DHFR-207ENST00000513314 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
DHFR-207ENST00000513314 DCAF8L1A6NGE4 600 aa18.75■□□□□ 0.59
DHFR-207ENST00000513314 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
DHFR-207ENST00000513314 CACNB1Q02641 598 aaPredicted RBP18.46■□□□□ 0.55
DHFR-207ENST00000513314 RNF39Q9H2S5 420 aa18.42■□□□□ 0.54
DHFR-207ENST00000513314 KCNA4P22459 653 aa18.39■□□□□ 0.53
DHFR-207ENST00000513314 DNAJC5BQ9UF47 199 aa18.37■□□□□ 0.53
DHFR-207ENST00000513314 C1QBPQ07021 282 aaKnown RBP18.18■□□□□ 0.5
DHFR-207ENST00000513314 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.01■□□□□ 0.474e-9■□□□□ 9.5
DHFR-207ENST00000513314 U3KPZ7 1027 aaPredicted RBP17.65■□□□□ 0.42
DHFR-207ENST00000513314 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
DHFR-207ENST00000513314 SLC4A1APQ9BWU0 796 aaKnown RBP17.45■□□□□ 0.38
DHFR-207ENST00000513314 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
DHFR-207ENST00000513314 CAPN15O75808 1086 aa17.32■□□□□ 0.36
DHFR-207ENST00000513314 DSG3P32926 999 aa17.26■□□□□ 0.35
DHFR-207ENST00000513314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.23■□□□□ 0.35
DHFR-207ENST00000513314 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
DHFR-207ENST00000513314 APLP2Q06481 763 aa17.19■□□□□ 0.34
DHFR-207ENST00000513314 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
DHFR-207ENST00000513314 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
DHFR-207ENST00000513314 FOXD4L1Q9NU39 408 aa17.09■□□□□ 0.33
DHFR-207ENST00000513314 ZNF219Q9P2Y4 722 aaPredicted RBP17.07■□□□□ 0.32
DHFR-207ENST00000513314 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
DHFR-207ENST00000513314 ABCB7O75027 752 aa16.89■□□□□ 0.29
DHFR-207ENST00000513314 ZBTB22O15209 634 aa16.88■□□□□ 0.29
DHFR-207ENST00000513314 ATF5Q9Y2D1 282 aaPredicted RBP16.65■□□□□ 0.26
DHFR-207ENST00000513314 POLA2Q14181 598 aa16.62■□□□□ 0.25
DHFR-207ENST00000513314 ATXN8OSP0DMR3 200 aa16.57■□□□□ 0.24
DHFR-207ENST00000513314 RBM42Q9BTD8 480 aaKnown RBP16.47■□□□□ 0.23
DHFR-207ENST00000513314 POTEHQ6S545 545 aa16.45■□□□□ 0.22
DHFR-207ENST00000513314 CSRNP3Q8WYN3 585 aa16.4■□□□□ 0.22
DHFR-207ENST00000513314 EHMT2Q96KQ7 1210 aa16.35■□□□□ 0.21
DHFR-207ENST00000513314 ZBTB12Q9Y330 459 aaPredicted RBP16.33■□□□□ 0.2
DHFR-207ENST00000513314 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
DHFR-207ENST00000513314 CHRDL2Q6WN34 429 aa16.07■□□□□ 0.16
DHFR-207ENST00000513314 OSCARQ8IYS5 282 aa16.07■□□□□ 0.16
DHFR-207ENST00000513314 FBLN2P98095 1184 aa16.05■□□□□ 0.16
DHFR-207ENST00000513314 REM2Q8IYK8 340 aaPredicted RBP15.94■□□□□ 0.14
DHFR-207ENST00000513314 MKRN4PQ13434 485 aaPredicted RBP15.91■□□□□ 0.14
DHFR-207ENST00000513314 SPDYE2BA6NHP3 402 aa15.83■□□□□ 0.12
DHFR-207ENST00000513314 SPDYE6P0CI01 402 aa15.83■□□□□ 0.12
DHFR-207ENST00000513314 SPDYE2Q495Y8 402 aa15.83■□□□□ 0.12
DHFR-207ENST00000513314 PITPNM1O00562 1244 aa15.75■□□□□ 0.11
DHFR-207ENST00000513314 PIP4P2Q8N4L2 257 aa15.7■□□□□ 0.1
DHFR-207ENST00000513314 ZNF692Q9BU19 519 aaPredicted RBP15.69■□□□□ 0.1
DHFR-207ENST00000513314 FXR2P51116 673 aaKnown RBP eCLIP15.65■□□□□ 0.1
DHFR-207ENST00000513314 SSUH2Q9Y2M2 353 aa15.63■□□□□ 0.09
DHFR-207ENST00000513314 SPDYE1Q8NFV5 336 aaPredicted RBP15.53■□□□□ 0.08
DHFR-207ENST00000513314 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.061e-6■■■■■ 27.9
DHFR-207ENST00000513314 CLEC11AQ9Y240 323 aa15.45■□□□□ 0.06
DHFR-207ENST00000513314 SP7Q8TDD2 431 aaPredicted RBP15.44■□□□□ 0.06
DHFR-207ENST00000513314 HAX1O00165 279 aa15.38■□□□□ 0.05
DHFR-207ENST00000513314 SPDYE4A6NLX3 237 aa15.34■□□□□ 0.05
DHFR-207ENST00000513314 PRKAR2AP13861 404 aaKnown RBP15.34■□□□□ 0.05
DHFR-207ENST00000513314 PRR29P0C7W0 189 aa15.23■□□□□ 0.03
DHFR-207ENST00000513314 EVX2Q03828 476 aa15.21■□□□□ 0.03
DHFR-207ENST00000513314 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
DHFR-207ENST00000513314 C19orf67A6NJJ6 358 aa15.14■□□□□ 0.01
DHFR-207ENST00000513314 STAG3Q9UJ98 1225 aa15.14■□□□□ 0.01
DHFR-207ENST00000513314 PROM2Q8N271 834 aa15□□□□□ -0.01
DHFR-207ENST00000513314 FARP1Q9Y4F1 1045 aaPredicted RBP14.98□□□□□ -0.01
DHFR-207ENST00000513314 CREBZFQ9NS37 354 aa14.9□□□□□ -0.02
DHFR-207ENST00000513314 GABBR2O75899 941 aa14.88□□□□□ -0.03
DHFR-207ENST00000513314 FKBP8Q14318 412 aa14.87□□□□□ -0.03
DHFR-207ENST00000513314 CD44P16070 742 aaKnown RBP14.85□□□□□ -0.03
DHFR-207ENST00000513314 CLCN6P51797 869 aa14.74□□□□□ -0.05
DHFR-207ENST00000513314 NPM1P06748 294 aaKnown RBP eCLIP14.68□□□□□ -0.06
DHFR-207ENST00000513314 ZNF579Q8NAF0 562 aaKnown RBP14.67□□□□□ -0.06
DHFR-207ENST00000513314 MNX1P50219 401 aaPredicted RBP14.66□□□□□ -0.06
DHFR-207ENST00000513314 ZRANB1Q9UGI0 708 aa14.65□□□□□ -0.06
DHFR-207ENST00000513314 MIER1Q8N108 512 aa14.62□□□□□ -0.07
DHFR-207ENST00000513314 PLEKHG5O94827 1062 aa14.61□□□□□ -0.07
DHFR-207ENST00000513314 POTEIP0CG38 1075 aa14.57□□□□□ -0.08
DHFR-207ENST00000513314 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
DHFR-207ENST00000513314 PLCD3Q8N3E9 789 aa14.54□□□□□ -0.08
DHFR-207ENST00000513314 FBXO3Q9UK99 471 aa14.53□□□□□ -0.08
DHFR-207ENST00000513314 LHX8Q68G74 356 aa14.48□□□□□ -0.09
DHFR-207ENST00000513314 DCBLD2Q96PD2 775 aa14.47□□□□□ -0.09
DHFR-207ENST00000513314 GALR2O43603 387 aaPredicted RBP14.45□□□□□ -0.1
DHFR-207ENST00000513314 ZBTB47Q9UFB7 747 aaPredicted RBP14.44□□□□□ -0.1
DHFR-207ENST00000513314 PHF12Q96QT6 1004 aa14.43□□□□□ -0.1
DHFR-207ENST00000513314 TSPYL2Q9H2G4 693 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms