RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 NISCHQ9Y2I1 1504 aa42.7■■■■■ 4.43
TMED3-201ENST00000299705 CCDC180Q9P1Z9 1646 aa37.72■■■■□ 3.63
TMED3-201ENST00000299705 ABCC9O60706 1549 aa36.29■■■■□ 3.4
TMED3-201ENST00000299705 ZCCHC6Q5VYS8 1495 aaKnown RBP35.69■■■■□ 3.3
TMED3-201ENST00000299705 DCAF1Q9Y4B6 1507 aa35.4■■■■□ 3.26
TMED3-201ENST00000299705 DCAF8L2P0C7V8 631 aa35.39■■■■□ 3.26
TMED3-201ENST00000299705 MYO15BQ96JP2 1530 aa35.35■■■■□ 3.25
TMED3-201ENST00000299705 NACADO15069 1562 aa35.34■■■■□ 3.25
TMED3-201ENST00000299705 RB1CC1Q8TDY2 1594 aa35.22■■■■□ 3.23
TMED3-201ENST00000299705 SCRIBQ14160 1630 aa34.4■■■■□ 3.1
TMED3-201ENST00000299705 UNC13AQ9UPW8 1703 aa34.4■■■■□ 3.1
TMED3-201ENST00000299705 BICRAQ9NZM4 1560 aa34.12■■■■□ 3.05
TMED3-201ENST00000299705 PABPN1Q86U42 306 aaKnown RBP eCLIP34.01■■■■□ 3.03
TMED3-201ENST00000299705 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.03
TMED3-201ENST00000299705 CECR2Q9BXF3 1484 aa33.18■■■□□ 2.9
TMED3-201ENST00000299705 EIF4G1Q04637 1599 aaKnown RBP33.17■■■□□ 2.9
TMED3-201ENST00000299705 BAZ1AQ9NRL2 1556 aaPredicted RBP33.06■■■□□ 2.88
TMED3-201ENST00000299705 SMARCA4P51532 1647 aa33■■■□□ 2.87
TMED3-201ENST00000299705 DNAJC5BQ9UF47 199 aa32.97■■■□□ 2.87
TMED3-201ENST00000299705 MROH2BQ7Z745 1585 aa32.9■■■□□ 2.86
TMED3-201ENST00000299705 CC2D2AQ9P2K1 1620 aa32.88■■■□□ 2.85
TMED3-201ENST00000299705 RSF1Q96T23 1441 aaPredicted RBP32.75■■■□□ 2.83
TMED3-201ENST00000299705 PEG3Q9GZU2 1588 aa32.7■■■□□ 2.83
TMED3-201ENST00000299705 ATAD2BQ9ULI0 1458 aa32.68■■■□□ 2.82
TMED3-201ENST00000299705 SMARCA2P51531 1590 aa32.68■■■□□ 2.82
TMED3-201ENST00000299705 NCAPD3P42695 1498 aa32.6■■■□□ 2.81
TMED3-201ENST00000299705 WIZO95785 1651 aa32.56■■■□□ 2.8
TMED3-201ENST00000299705 HMGXB3Q12766 1538 aa32.49■■■□□ 2.79
TMED3-201ENST00000299705 BAZ1BQ9UIG0 1483 aaKnown RBP32.44■■■□□ 2.78
TMED3-201ENST00000299705 SUPT5HO00267 1087 aaKnown RBP32.3■■■□□ 2.76
TMED3-201ENST00000299705 TOP2AP11388 1531 aaKnown RBP32.28■■■□□ 2.76
TMED3-201ENST00000299705 CCDC88BA6NC98 1476 aa31.89■■■□□ 2.7
TMED3-201ENST00000299705 CADPSQ9ULU8 1353 aa31.67■■■□□ 2.66
TMED3-201ENST00000299705 LAMC3Q9Y6N6 1575 aa31.64■■■□□ 2.66
TMED3-201ENST00000299705 CFTRP13569 1480 aa31.61■■■□□ 2.65
TMED3-201ENST00000299705 NESP48681 1621 aa31.58■■■□□ 2.65
TMED3-201ENST00000299705 PRDM2Q13029 1718 aa31.4■■■□□ 2.62
TMED3-201ENST00000299705 PDS5BQ9NTI5 1447 aa31.4■■■□□ 2.62
TMED3-201ENST00000299705 FANCD2Q9BXW9 1451 aa31.29■■■□□ 2.6
TMED3-201ENST00000299705 ERCC6Q03468 1493 aa31.25■■■□□ 2.59
TMED3-201ENST00000299705 KIF21AQ7Z4S6 1674 aa31.23■■■□□ 2.59
TMED3-201ENST00000299705 CEP164Q9UPV0 1460 aa31.19■■■□□ 2.58
TMED3-201ENST00000299705 MRC2Q9UBG0 1479 aa31.03■■■□□ 2.56
TMED3-201ENST00000299705 THOC2Q8NI27 1593 aaKnown RBP31■■■□□ 2.55
TMED3-201ENST00000299705 URB2Q14146 1524 aaKnown RBP30.93■■■□□ 2.54
TMED3-201ENST00000299705 ABCC8Q09428 1581 aa30.93■■■□□ 2.54
TMED3-201ENST00000299705 WDR62O43379 1518 aa30.91■■■□□ 2.54
TMED3-201ENST00000299705 DNMBPQ6XZF7 1577 aa30.87■■■□□ 2.53
TMED3-201ENST00000299705 TOPBP1Q92547 1522 aa30.86■■■□□ 2.53
TMED3-201ENST00000299705 WRNQ14191 1432 aaPredicted RBP eCLIP30.85■■■□□ 2.53
TMED3-201ENST00000299705 CUX1P39880 1505 aa30.83■■■□□ 2.53
TMED3-201ENST00000299705 CUX2O14529 1486 aa30.75■■■□□ 2.51
TMED3-201ENST00000299705 TOP2BQ02880 1626 aa30.74■■■□□ 2.51
TMED3-201ENST00000299705 SYNJ1O43426 1573 aa30.73■■■□□ 2.51
TMED3-201ENST00000299705 BIVM-ERCC5R4GMW8 1640 aa30.73■■■□□ 2.51
TMED3-201ENST00000299705 FGD5Q6ZNL6 1462 aa30.64■■■□□ 2.49
TMED3-201ENST00000299705 POLA1P09884 1462 aaPredicted RBP30.63■■■□□ 2.49
TMED3-201ENST00000299705 CHIC1Q5VXU3 224 aa30.53■■■□□ 2.48
TMED3-201ENST00000299705 SOGA1O94964 1423 aa30.53■■■□□ 2.48
TMED3-201ENST00000299705 IFT140Q96RY7 1462 aa30.52■■■□□ 2.48
TMED3-201ENST00000299705 TRIM41Q8WV44 630 aa30.52■■■□□ 2.48
TMED3-201ENST00000299705 TARBP1Q13395 1621 aaKnown RBP30.48■■■□□ 2.47
TMED3-201ENST00000299705 RAD54L2Q9Y4B4 1467 aa30.47■■■□□ 2.47
TMED3-201ENST00000299705 ABCA10Q8WWZ4 1543 aa30.4■■■□□ 2.46
TMED3-201ENST00000299705 WDR97A6NE52 1622 aa30.36■■■□□ 2.45
TMED3-201ENST00000299705 ZNF608Q9ULD9 1512 aaPredicted RBP30.31■■■□□ 2.44
TMED3-201ENST00000299705 TDRD9Q8NDG6 1382 aaKnown RBP30.25■■■□□ 2.43
TMED3-201ENST00000299705 AQRO60306 1485 aaKnown RBP eCLIP30.22■■■□□ 2.43
TMED3-201ENST00000299705 EIF4G3O43432 1585 aaKnown RBP30.22■■■□□ 2.43
TMED3-201ENST00000299705 ABCA5Q8WWZ7 1642 aa30.21■■■□□ 2.43
TMED3-201ENST00000299705 GAPVD1Q14C86 1478 aa30.18■■■□□ 2.42
TMED3-201ENST00000299705 KIF27Q86VH2 1401 aa30.18■■■□□ 2.42
TMED3-201ENST00000299705 GRIN2BQ13224 1484 aa30.1■■■□□ 2.41
TMED3-201ENST00000299705 PBRM1Q86U86 1689 aa30.06■■■□□ 2.4
TMED3-201ENST00000299705 ERICH3Q5RHP9 1530 aa30.04■■■□□ 2.4
TMED3-201ENST00000299705 RUSC2Q8N2Y8 1516 aa30.04■■■□□ 2.4
TMED3-201ENST00000299705 EEA1Q15075 1411 aa30.02■■■□□ 2.4
TMED3-201ENST00000299705 IGF1RP08069 1367 aa29.99■■■□□ 2.39
TMED3-201ENST00000299705 MAGI1Q96QZ7 1491 aaPredicted RBP29.97■■■□□ 2.39
TMED3-201ENST00000299705 SNAPC4Q5SXM2 1469 aa29.96■■■□□ 2.39
TMED3-201ENST00000299705 CUL7Q14999 1698 aa29.87■■■□□ 2.37
TMED3-201ENST00000299705 CSRNP3Q8WYN3 585 aa29.87■■■□□ 2.37
TMED3-201ENST00000299705 FHAD1B1AJZ9 1412 aa29.86■■■□□ 2.37
TMED3-201ENST00000299705 ADAMTS12P58397 1594 aa29.86■■■□□ 2.37
TMED3-201ENST00000299705 SYNJ2O15056 1496 aa29.84■■■□□ 2.37
TMED3-201ENST00000299705 FAM9AQ8IZU1 332 aaPredicted RBP29.82■■■□□ 2.36
TMED3-201ENST00000299705 CARMIL1Q5VZK9 1371 aa29.82■■■□□ 2.36
TMED3-201ENST00000299705 CHMP7Q8WUX9 453 aaPredicted RBP29.77■■■□□ 2.36
TMED3-201ENST00000299705 PRXQ9BXM0 1461 aa29.75■■■□□ 2.35
TMED3-201ENST00000299705 DNAJC5Q9H3Z4 198 aa29.74■■■□□ 2.35
TMED3-201ENST00000299705 FBLN2P98095 1184 aa29.73■■■□□ 2.35
TMED3-201ENST00000299705 CHD1O14646 1710 aa29.72■■■□□ 2.35
TMED3-201ENST00000299705 GRIN2AQ12879 1464 aa29.71■■■□□ 2.35
TMED3-201ENST00000299705 RAPGEF2Q9Y4G8 1499 aa29.71■■■□□ 2.35
TMED3-201ENST00000299705 KIF21BO75037 1637 aa29.63■■■□□ 2.33
TMED3-201ENST00000299705 OSCARQ8IYS5 282 aa29.58■■■□□ 2.33
TMED3-201ENST00000299705 NUP160Q12769 1436 aa29.57■■■□□ 2.32
TMED3-201ENST00000299705 CEP170Q5SW79 1584 aa29.52■■■□□ 2.32
TMED3-201ENST00000299705 GOLGA3Q08378 1498 aa29.49■■■□□ 2.31
TMED3-201ENST00000299705 CLASP1Q7Z460 1538 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms