RNA–Protein interactions for RNA: ENST00000453246.5

ABCA13-205, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-205ENST00000453246 NISCHQ9Y2I1 1504 aa18.2■□□□□ 0.5
ABCA13-205ENST00000453246 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
ABCA13-205ENST00000453246 SUPT5HO00267 1087 aaKnown RBP16.88■□□□□ 0.29
ABCA13-205ENST00000453246 SHROOM4Q9ULL8 1493 aa16.86■□□□□ 0.29
ABCA13-205ENST00000453246 EHMT2Q96KQ7 1210 aa15.99■□□□□ 0.15
ABCA13-205ENST00000453246 PCGF6Q9BYE7 350 aa15.95■□□□□ 0.14
ABCA13-205ENST00000453246 FAM9AQ8IZU1 332 aaPredicted RBP15.79■□□□□ 0.12
ABCA13-205ENST00000453246 CHIC1Q5VXU3 224 aa15.68■□□□□ 0.1
ABCA13-205ENST00000453246 TRIM41Q8WV44 630 aa15.57■□□□□ 0.08
ABCA13-205ENST00000453246 LOC105371045A0A1W2PR82 267 aa15.54■□□□□ 0.08
ABCA13-205ENST00000453246 HRCP23327 699 aa15.5■□□□□ 0.07
ABCA13-205ENST00000453246 TTBK1Q5TCY1 1321 aaPredicted RBP15.46■□□□□ 0.07
ABCA13-205ENST00000453246 PPARGC1BQ86YN6 1023 aaKnown RBP15.34■□□□□ 0.05
ABCA13-205ENST00000453246 TRIM26Q12899 539 aaPredicted RBP15.31■□□□□ 0.04
ABCA13-205ENST00000453246 ZEB1P37275 1124 aaPredicted RBP15.25■□□□□ 0.03
ABCA13-205ENST00000453246 ZCCHC6Q5VYS8 1495 aaKnown RBP15.22■□□□□ 0.03
ABCA13-205ENST00000453246 CCER1Q8TC90 406 aaPredicted RBP15.2■□□□□ 0.02
ABCA13-205ENST00000453246 RANGAP1P46060 587 aaPredicted RBP15.15■□□□□ 0.02
ABCA13-205ENST00000453246 APLP2Q06481 763 aa15.14■□□□□ 0.01
ABCA13-205ENST00000453246 PELP1Q8IZL8 1130 aaKnown RBP15.13■□□□□ 0.01
ABCA13-205ENST00000453246 UBTFP17480 764 aaKnown RBP15.11■□□□□ 0.01
ABCA13-205ENST00000453246 MYO15BQ96JP2 1530 aa15.01□□□□□ -0.01
ABCA13-205ENST00000453246 ABCC9O60706 1549 aa14.96□□□□□ -0.01
ABCA13-205ENST00000453246 CCDC180Q9P1Z9 1646 aa14.92□□□□□ -0.02
ABCA13-205ENST00000453246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
ABCA13-205ENST00000453246 CENPBP07199 599 aaPredicted RBP14.9□□□□□ -0.02
ABCA13-205ENST00000453246 YTHDC1Q96MU7 727 aaKnown RBP14.83□□□□□ -0.04
ABCA13-205ENST00000453246 SCRIBQ14160 1630 aa14.78□□□□□ -0.04
ABCA13-205ENST00000453246 DCAF1Q9Y4B6 1507 aa14.77□□□□□ -0.04
ABCA13-205ENST00000453246 HNRNPUL2Q1KMD3 747 aaKnown RBP14.77□□□□□ -0.05
ABCA13-205ENST00000453246 PABPN1Q86U42 306 aaKnown RBP eCLIP14.74□□□□□ -0.05
ABCA13-205ENST00000453246 ATP1B4Q9UN42 357 aaPredicted RBP14.71□□□□□ -0.06
ABCA13-205ENST00000453246 DIEXFQ68CQ4 756 aaKnown RBP14.65□□□□□ -0.06
ABCA13-205ENST00000453246 RSF1Q96T23 1441 aaPredicted RBP14.62□□□□□ -0.07
ABCA13-205ENST00000453246 MYT1Q01538 1121 aa14.62□□□□□ -0.07
ABCA13-205ENST00000453246 ITGAEP38570 1179 aa14.61□□□□□ -0.07
ABCA13-205ENST00000453246 CSRNP3Q8WYN3 585 aa14.52□□□□□ -0.08
ABCA13-205ENST00000453246 GTF3C3Q9Y5Q9 886 aa14.52□□□□□ -0.09
ABCA13-205ENST00000453246 SCAF1Q9H7N4 1312 aaKnown RBP14.47□□□□□ -0.09
ABCA13-205ENST00000453246 ACIN1Q9UKV3 1341 aaKnown RBP14.38□□□□□ -0.11
ABCA13-205ENST00000453246 CECR2Q9BXF3 1484 aa14.38□□□□□ -0.11
ABCA13-205ENST00000453246 ZNF316A6NFI3 1004 aaPredicted RBP14.37□□□□□ -0.11
ABCA13-205ENST00000453246 RB1CC1Q8TDY2 1594 aa14.31□□□□□ -0.12
ABCA13-205ENST00000453246 NEUROD1Q13562 356 aa14.3□□□□□ -0.12
ABCA13-205ENST00000453246 NEFLP07196 543 aa14.26□□□□□ -0.13
ABCA13-205ENST00000453246 FAM50AQ14320 339 aaKnown RBP14.25□□□□□ -0.13
ABCA13-205ENST00000453246 NACADO15069 1562 aa14.22□□□□□ -0.13
ABCA13-205ENST00000453246 CEP162Q5TB80 1403 aa14.21□□□□□ -0.13
ABCA13-205ENST00000453246 MROH2BQ7Z745 1585 aa14.21□□□□□ -0.13
ABCA13-205ENST00000453246 ERICH6Q7L0X2 663 aa14.18□□□□□ -0.14
ABCA13-205ENST00000453246 P3H3Q8IVL6 736 aa14.16□□□□□ -0.14
ABCA13-205ENST00000453246 SOGA1O94964 1423 aa14.11□□□□□ -0.15
ABCA13-205ENST00000453246 CLIP1P30622 1438 aa14.11□□□□□ -0.15
ABCA13-205ENST00000453246 MYT1LQ9UL68 1186 aa14.1□□□□□ -0.15
ABCA13-205ENST00000453246 BAZ1AQ9NRL2 1556 aaPredicted RBP14.1□□□□□ -0.15
ABCA13-205ENST00000453246 MIER1Q8N108 512 aa14.09□□□□□ -0.15
ABCA13-205ENST00000453246 TNIKQ9UKE5 1360 aa14.09□□□□□ -0.15
ABCA13-205ENST00000453246 CNGB1Q14028 1251 aaPredicted RBP14.09□□□□□ -0.15
ABCA13-205ENST00000453246 WRNQ14191 1432 aaPredicted RBP eCLIP14.08□□□□□ -0.16
ABCA13-205ENST00000453246 BCANQ96GW7 911 aa14.07□□□□□ -0.16
ABCA13-205ENST00000453246 GOLGA3Q08378 1498 aa14.06□□□□□ -0.16
ABCA13-205ENST00000453246 POLR3GLQ9BT43 218 aa14.06□□□□□ -0.16
ABCA13-205ENST00000453246 EEA1Q15075 1411 aa14.06□□□□□ -0.16
ABCA13-205ENST00000453246 ABCC8Q09428 1581 aa14.05□□□□□ -0.16
ABCA13-205ENST00000453246 CCDC88BA6NC98 1476 aa14.05□□□□□ -0.16
ABCA13-205ENST00000453246 WIZO95785 1651 aa14.04□□□□□ -0.16
ABCA13-205ENST00000453246 TRIM52Q96A61 297 aa13.98□□□□□ -0.17
ABCA13-205ENST00000453246 ARID3CA6NKF2 412 aa13.94□□□□□ -0.18
ABCA13-205ENST00000453246 CEP164Q9UPV0 1460 aa13.94□□□□□ -0.18
ABCA13-205ENST00000453246 ANP32CO43423 234 aa13.93□□□□□ -0.18
ABCA13-205ENST00000453246 DDX10Q13206 875 aaKnown RBP13.92□□□□□ -0.18
ABCA13-205ENST00000453246 BAZ1BQ9UIG0 1483 aaKnown RBP13.91□□□□□ -0.18
ABCA13-205ENST00000453246 HIRIP3Q9BW71 556 aaPredicted RBP13.87□□□□□ -0.19
ABCA13-205ENST00000453246 RUSC2Q8N2Y8 1516 aa13.86□□□□□ -0.19
ABCA13-205ENST00000453246 TOP2AP11388 1531 aaKnown RBP13.83□□□□□ -0.2
ABCA13-205ENST00000453246 ZNF326Q5BKZ1 582 aaKnown RBP13.81□□□□□ -0.2
ABCA13-205ENST00000453246 FKBP8Q14318 412 aa13.8□□□□□ -0.2
ABCA13-205ENST00000453246 VPS8Q8N3P4 1428 aa13.79□□□□□ -0.2
ABCA13-205ENST00000453246 KANK4Q5T7N3 995 aaPredicted RBP13.79□□□□□ -0.2
ABCA13-205ENST00000453246 TONSLQ96HA7 1378 aa13.78□□□□□ -0.2
ABCA13-205ENST00000453246 KIF27Q86VH2 1401 aa13.78□□□□□ -0.2
ABCA13-205ENST00000453246 CHIC2Q9UKJ5 165 aa13.76□□□□□ -0.21
ABCA13-205ENST00000453246 FBLN2P98095 1184 aa13.74□□□□□ -0.21
ABCA13-205ENST00000453246 SIN3AQ96ST3 1273 aa13.73□□□□□ -0.21
ABCA13-205ENST00000453246 SMARCA4P51532 1647 aa13.72□□□□□ -0.21
ABCA13-205ENST00000453246 SLC4A1APQ9BWU0 796 aaKnown RBP13.7□□□□□ -0.22
ABCA13-205ENST00000453246 CLSPNQ9HAW4 1339 aa13.7□□□□□ -0.22
ABCA13-205ENST00000453246 MTUS2Q5JR59 1369 aa13.7□□□□□ -0.22
ABCA13-205ENST00000453246 HNRNPUQ00839 825 aaKnown RBP eCLIP13.7□□□□□ -0.22
ABCA13-205ENST00000453246 RAPGEF2Q9Y4G8 1499 aa13.69□□□□□ -0.22
ABCA13-205ENST00000453246 CCNB3Q8WWL7 1395 aa13.69□□□□□ -0.22
ABCA13-205ENST00000453246 ZNF777Q9ULD5 760 aaPredicted RBP13.68□□□□□ -0.22
ABCA13-205ENST00000453246 SMARCA2P51531 1590 aa13.66□□□□□ -0.22
ABCA13-205ENST00000453246 CDK11AQ9UQ88 783 aaPredicted RBP13.65□□□□□ -0.22
ABCA13-205ENST00000453246 RRP7BPQ9NSQ0 103 aa13.65□□□□□ -0.22
ABCA13-205ENST00000453246 CUX2O14529 1486 aa13.63□□□□□ -0.23
ABCA13-205ENST00000453246 FAM9BQ8IZU0 186 aa13.62□□□□□ -0.23
ABCA13-205ENST00000453246 ATAD2BQ9ULI0 1458 aa13.61□□□□□ -0.23
ABCA13-205ENST00000453246 CARMIL1Q5VZK9 1371 aa13.61□□□□□ -0.23
ABCA13-205ENST00000453246 IRX6P78412 446 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms