RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 NISCHQ9Y2I1 1504 aa25.43■■□□□ 1.66
ATG9A-203ENST00000409033 DCAF8L2P0C7V8 631 aa22.9■■□□□ 1.26
ATG9A-203ENST00000409033 SHROOM4Q9ULL8 1493 aa22.67■■□□□ 1.22
ATG9A-203ENST00000409033 SUPT5HO00267 1087 aaKnown RBP22.22■■□□□ 1.15
ATG9A-203ENST00000409033 ZCCHC6Q5VYS8 1495 aaKnown RBP21.3■■□□□ 1
ATG9A-203ENST00000409033 CCDC180Q9P1Z9 1646 aa21.3■■□□□ 1
ATG9A-203ENST00000409033 ABCC9O60706 1549 aa21.15■□□□□ 0.98
ATG9A-203ENST00000409033 EHMT2Q96KQ7 1210 aa20.99■□□□□ 0.95
ATG9A-203ENST00000409033 CHIC1Q5VXU3 224 aa20.77■□□□□ 0.92
ATG9A-203ENST00000409033 FAM9AQ8IZU1 332 aaPredicted RBP20.75■□□□□ 0.91
ATG9A-203ENST00000409033 SCRIBQ14160 1630 aa20.72■□□□□ 0.91
ATG9A-203ENST00000409033 LOC105371045A0A1W2PR82 267 aa20.53■□□□□ 0.88
ATG9A-203ENST00000409033 PABPN1Q86U42 306 aaKnown RBP eCLIP20.51■□□□□ 0.87
ATG9A-203ENST00000409033 TRIM41Q8WV44 630 aa20.47■□□□□ 0.87
ATG9A-203ENST00000409033 PCGF6Q9BYE7 350 aa20.37■□□□□ 0.85
ATG9A-203ENST00000409033 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
ATG9A-203ENST00000409033 MYO15BQ96JP2 1530 aa20.31■□□□□ 0.84
ATG9A-203ENST00000409033 RSF1Q96T23 1441 aaPredicted RBP20.18■□□□□ 0.82
ATG9A-203ENST00000409033 TTBK1Q5TCY1 1321 aaPredicted RBP20.16■□□□□ 0.82
ATG9A-203ENST00000409033 CECR2Q9BXF3 1484 aa20.15■□□□□ 0.82
ATG9A-203ENST00000409033 PPARGC1BQ86YN6 1023 aaKnown RBP20.11■□□□□ 0.81
ATG9A-203ENST00000409033 NACADO15069 1562 aa20.08■□□□□ 0.8
ATG9A-203ENST00000409033 RB1CC1Q8TDY2 1594 aa20■□□□□ 0.79
ATG9A-203ENST00000409033 RANGAP1P46060 587 aaPredicted RBP19.98■□□□□ 0.79
ATG9A-203ENST00000409033 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
ATG9A-203ENST00000409033 UBTFP17480 764 aaKnown RBP19.79■□□□□ 0.76
ATG9A-203ENST00000409033 WIZO95785 1651 aa19.75■□□□□ 0.75
ATG9A-203ENST00000409033 TRIM26Q12899 539 aaPredicted RBP19.63■□□□□ 0.73
ATG9A-203ENST00000409033 HRCP23327 699 aa19.62■□□□□ 0.73
ATG9A-203ENST00000409033 BAZ1AQ9NRL2 1556 aaPredicted RBP19.6■□□□□ 0.73
ATG9A-203ENST00000409033 ABCC8Q09428 1581 aa19.45■□□□□ 0.7
ATG9A-203ENST00000409033 CCDC88BA6NC98 1476 aa19.43■□□□□ 0.7
ATG9A-203ENST00000409033 APLP2Q06481 763 aa19.38■□□□□ 0.69
ATG9A-203ENST00000409033 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
ATG9A-203ENST00000409033 CSRNP3Q8WYN3 585 aa19.35■□□□□ 0.69
ATG9A-203ENST00000409033 CCER1Q8TC90 406 aaPredicted RBP19.34■□□□□ 0.69
ATG9A-203ENST00000409033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.3■□□□□ 0.68
ATG9A-203ENST00000409033 BAZ1BQ9UIG0 1483 aaKnown RBP19.3■□□□□ 0.68
ATG9A-203ENST00000409033 SOGA1O94964 1423 aa19.28■□□□□ 0.68
ATG9A-203ENST00000409033 TOP2AP11388 1531 aaKnown RBP19.28■□□□□ 0.68
ATG9A-203ENST00000409033 UNC13AQ9UPW8 1703 aa19.25■□□□□ 0.67
ATG9A-203ENST00000409033 ATP1B4Q9UN42 357 aaPredicted RBP19.25■□□□□ 0.67
ATG9A-203ENST00000409033 HNRNPUL2Q1KMD3 747 aaKnown RBP19.2■□□□□ 0.66
ATG9A-203ENST00000409033 WRNQ14191 1432 aaPredicted RBP eCLIP19.19■□□□□ 0.66
ATG9A-203ENST00000409033 BICRAQ9NZM4 1560 aa19.18■□□□□ 0.66
ATG9A-203ENST00000409033 SMARCA2P51531 1590 aa19.17■□□□□ 0.66
ATG9A-203ENST00000409033 RUSC2Q8N2Y8 1516 aa19.14■□□□□ 0.65
ATG9A-203ENST00000409033 ATAD2BQ9ULI0 1458 aa19.14■□□□□ 0.65
ATG9A-203ENST00000409033 ITGAEP38570 1179 aa19.07■□□□□ 0.64
ATG9A-203ENST00000409033 CEP162Q5TB80 1403 aa19.04■□□□□ 0.64
ATG9A-203ENST00000409033 ZEB1P37275 1124 aaPredicted RBP19.03■□□□□ 0.64
ATG9A-203ENST00000409033 P3H3Q8IVL6 736 aa18.98■□□□□ 0.63
ATG9A-203ENST00000409033 GOLGA3Q08378 1498 aa18.88■□□□□ 0.61
ATG9A-203ENST00000409033 CLIP1P30622 1438 aa18.86■□□□□ 0.61
ATG9A-203ENST00000409033 TNIKQ9UKE5 1360 aa18.86■□□□□ 0.61
ATG9A-203ENST00000409033 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
ATG9A-203ENST00000409033 EEA1Q15075 1411 aa18.81■□□□□ 0.6
ATG9A-203ENST00000409033 SYNJ1O43426 1573 aa18.79■□□□□ 0.6
ATG9A-203ENST00000409033 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
ATG9A-203ENST00000409033 RAPGEF2Q9Y4G8 1499 aa18.75■□□□□ 0.59
ATG9A-203ENST00000409033 ARID3CA6NKF2 412 aa18.73■□□□□ 0.59
ATG9A-203ENST00000409033 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
ATG9A-203ENST00000409033 KIF27Q86VH2 1401 aa18.67■□□□□ 0.58
ATG9A-203ENST00000409033 FAM50AQ14320 339 aaKnown RBP18.67■□□□□ 0.58
ATG9A-203ENST00000409033 NCAPD3P42695 1498 aa18.67■□□□□ 0.58
ATG9A-203ENST00000409033 CUX2O14529 1486 aa18.66■□□□□ 0.58
ATG9A-203ENST00000409033 YTHDC1Q96MU7 727 aaKnown RBP18.63■□□□□ 0.57
ATG9A-203ENST00000409033 CADPSQ9ULU8 1353 aa18.61■□□□□ 0.57
ATG9A-203ENST00000409033 PEG3Q9GZU2 1588 aa18.6■□□□□ 0.57
ATG9A-203ENST00000409033 FBLN2P98095 1184 aa18.57■□□□□ 0.56
ATG9A-203ENST00000409033 KANK4Q5T7N3 995 aaPredicted RBP18.57■□□□□ 0.56
ATG9A-203ENST00000409033 NESP48681 1621 aa18.54■□□□□ 0.56
ATG9A-203ENST00000409033 CC2D2AQ9P2K1 1620 aa18.53■□□□□ 0.56
ATG9A-203ENST00000409033 DIEXFQ68CQ4 756 aaKnown RBP18.52■□□□□ 0.56
ATG9A-203ENST00000409033 VPS8Q8N3P4 1428 aa18.5■□□□□ 0.55
ATG9A-203ENST00000409033 CUX1P39880 1505 aa18.5■□□□□ 0.55
ATG9A-203ENST00000409033 CARMIL1Q5VZK9 1371 aa18.49■□□□□ 0.55
ATG9A-203ENST00000409033 TDRD9Q8NDG6 1382 aaKnown RBP18.49■□□□□ 0.55
ATG9A-203ENST00000409033 CFTRP13569 1480 aa18.48■□□□□ 0.55
ATG9A-203ENST00000409033 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
ATG9A-203ENST00000409033 FANCD2Q9BXW9 1451 aa18.46■□□□□ 0.55
ATG9A-203ENST00000409033 RAD54L2Q9Y4B4 1467 aa18.44■□□□□ 0.54
ATG9A-203ENST00000409033 NEUROD1Q13562 356 aa18.43■□□□□ 0.54
ATG9A-203ENST00000409033 FGD5Q6ZNL6 1462 aa18.43■□□□□ 0.54
ATG9A-203ENST00000409033 TOP2BQ02880 1626 aa18.42■□□□□ 0.54
ATG9A-203ENST00000409033 IGF1RP08069 1367 aa18.36■□□□□ 0.53
ATG9A-203ENST00000409033 KIF21BO75037 1637 aa18.32■□□□□ 0.52
ATG9A-203ENST00000409033 ZNF316A6NFI3 1004 aaPredicted RBP18.31■□□□□ 0.52
ATG9A-203ENST00000409033 ARAP1Q96P48 1450 aa18.28■□□□□ 0.52
ATG9A-203ENST00000409033 FHOD3Q2V2M9 1422 aa18.28■□□□□ 0.52
ATG9A-203ENST00000409033 PRXQ9BXM0 1461 aa18.27■□□□□ 0.51
ATG9A-203ENST00000409033 CHIC2Q9UKJ5 165 aa18.26■□□□□ 0.51
ATG9A-203ENST00000409033 CENPBP07199 599 aaPredicted RBP18.23■□□□□ 0.51
ATG9A-203ENST00000409033 PDS5BQ9NTI5 1447 aa18.23■□□□□ 0.51
ATG9A-203ENST00000409033 MTUS2Q5JR59 1369 aa18.21■□□□□ 0.51
ATG9A-203ENST00000409033 TRIM52Q96A61 297 aa18.2■□□□□ 0.5
ATG9A-203ENST00000409033 CCNB3Q8WWL7 1395 aa18.18■□□□□ 0.5
ATG9A-203ENST00000409033 BIVM-ERCC5R4GMW8 1640 aa18.17■□□□□ 0.5
ATG9A-203ENST00000409033 POLA1P09884 1462 aaPredicted RBP18.17■□□□□ 0.5
ATG9A-203ENST00000409033 ARHGAP35Q9NRY4 1499 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms