RNA–Protein interactions for RNA: ENST00000302262.7

GAA-201, Transcript of glucosidase alpha, acid, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAA, Length 3,626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAA-201ENST00000302262 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
GAA-201ENST00000302262 DCAF8L2P0C7V8 631 aa20.97■□□□□ 0.95
GAA-201ENST00000302262 SHROOM4Q9ULL8 1493 aa20.34■□□□□ 0.85
GAA-201ENST00000302262 SUPT5HO00267 1087 aaKnown RBP19.94■□□□□ 0.78
GAA-201ENST00000302262 ABCC9O60706 1549 aa19.91■□□□□ 0.78
GAA-201ENST00000302262 CCDC180Q9P1Z9 1646 aa19.89■□□□□ 0.77
GAA-201ENST00000302262 ZCCHC6Q5VYS8 1495 aaKnown RBP19.56■□□□□ 0.72
GAA-201ENST00000302262 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.669e-7■■□□□ 12.1
GAA-201ENST00000302262 SCRIBQ14160 1630 aa19.09■□□□□ 0.65
GAA-201ENST00000302262 DCAF1Q9Y4B6 1507 aa18.89■□□□□ 0.61
GAA-201ENST00000302262 NACADO15069 1562 aa18.83■□□□□ 0.61
GAA-201ENST00000302262 RB1CC1Q8TDY2 1594 aa18.81■□□□□ 0.6
GAA-201ENST00000302262 EHMT2Q96KQ7 1210 aa18.81■□□□□ 0.6
GAA-201ENST00000302262 FAM9AQ8IZU1 332 aaPredicted RBP18.62■□□□□ 0.57
GAA-201ENST00000302262 HRCP23327 699 aa18.6■□□□□ 0.57
GAA-201ENST00000302262 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
GAA-201ENST00000302262 MYO15BQ96JP2 1530 aa18.56■□□□□ 0.56
GAA-201ENST00000302262 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
GAA-201ENST00000302262 PPARGC1BQ86YN6 1023 aaKnown RBP18.5■□□□□ 0.55
GAA-201ENST00000302262 TRIM41Q8WV44 630 aa18.41■□□□□ 0.54
GAA-201ENST00000302262 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
GAA-201ENST00000302262 PELP1Q8IZL8 1130 aaKnown RBP18.4■□□□□ 0.54
GAA-201ENST00000302262 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
GAA-201ENST00000302262 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
GAA-201ENST00000302262 MROH2BQ7Z745 1585 aa18.26■□□□□ 0.51
GAA-201ENST00000302262 BAZ1AQ9NRL2 1556 aaPredicted RBP18.1■□□□□ 0.49
GAA-201ENST00000302262 WIZO95785 1651 aa18.07■□□□□ 0.48
GAA-201ENST00000302262 TTBK1Q5TCY1 1321 aaPredicted RBP18.06■□□□□ 0.48
GAA-201ENST00000302262 BICRAQ9NZM4 1560 aa18.04■□□□□ 0.48
GAA-201ENST00000302262 UNC13AQ9UPW8 1703 aa18.04■□□□□ 0.48
GAA-201ENST00000302262 RANGAP1P46060 587 aaPredicted RBP17.95■□□□□ 0.46
GAA-201ENST00000302262 SMARCA4P51532 1647 aa17.92■□□□□ 0.46
GAA-201ENST00000302262 BAZ1BQ9UIG0 1483 aaKnown RBP17.9■□□□□ 0.46
GAA-201ENST00000302262 SCAF1Q9H7N4 1312 aaKnown RBP17.87■□□□□ 0.45
GAA-201ENST00000302262 UBTFP17480 764 aaKnown RBP17.82■□□□□ 0.44
GAA-201ENST00000302262 ATAD2BQ9ULI0 1458 aa17.81■□□□□ 0.44
GAA-201ENST00000302262 CCDC88BA6NC98 1476 aa17.81■□□□□ 0.44
GAA-201ENST00000302262 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
GAA-201ENST00000302262 MYT1Q01538 1121 aa17.73■□□□□ 0.43
GAA-201ENST00000302262 TOP2AP11388 1531 aaKnown RBP17.71■□□□□ 0.43
GAA-201ENST00000302262 SMARCA2P51531 1590 aa17.68■□□□□ 0.42
GAA-201ENST00000302262 DNAJC5BQ9UF47 199 aa17.68■□□□□ 0.42
GAA-201ENST00000302262 TRIM26Q12899 539 aaPredicted RBP17.61■□□□□ 0.41
GAA-201ENST00000302262 ABCC8Q09428 1581 aa17.6■□□□□ 0.41
GAA-201ENST00000302262 APLP2Q06481 763 aa17.53■□□□□ 0.4
GAA-201ENST00000302262 CC2D2AQ9P2K1 1620 aa17.52■□□□□ 0.39
GAA-201ENST00000302262 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
GAA-201ENST00000302262 WRNQ14191 1432 aaPredicted RBP eCLIP17.49■□□□□ 0.39
GAA-201ENST00000302262 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
GAA-201ENST00000302262 SOGA1O94964 1423 aa17.39■□□□□ 0.37
GAA-201ENST00000302262 CCER1Q8TC90 406 aaPredicted RBP17.38■□□□□ 0.37
GAA-201ENST00000302262 CADPSQ9ULU8 1353 aa17.37■□□□□ 0.37
GAA-201ENST00000302262 ATP1B4Q9UN42 357 aaPredicted RBP17.36■□□□□ 0.37
GAA-201ENST00000302262 GTF3C3Q9Y5Q9 886 aa17.35■□□□□ 0.37
GAA-201ENST00000302262 ZEB1P37275 1124 aaPredicted RBP17.34■□□□□ 0.37
GAA-201ENST00000302262 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
GAA-201ENST00000302262 PEG3Q9GZU2 1588 aa17.33■□□□□ 0.36
GAA-201ENST00000302262 NESP48681 1621 aa17.33■□□□□ 0.36
GAA-201ENST00000302262 ACIN1Q9UKV3 1341 aaKnown RBP17.31■□□□□ 0.36
GAA-201ENST00000302262 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
GAA-201ENST00000302262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.28■□□□□ 0.36
GAA-201ENST00000302262 RUSC2Q8N2Y8 1516 aa17.27■□□□□ 0.35
GAA-201ENST00000302262 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
GAA-201ENST00000302262 FBLN2P98095 1184 aa17.22■□□□□ 0.35
GAA-201ENST00000302262 P3H3Q8IVL6 736 aa17.2■□□□□ 0.34
GAA-201ENST00000302262 CFTRP13569 1480 aa17.18■□□□□ 0.34
GAA-201ENST00000302262 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
GAA-201ENST00000302262 CENPBP07199 599 aaPredicted RBP17.18■□□□□ 0.34
GAA-201ENST00000302262 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
GAA-201ENST00000302262 ITGAEP38570 1179 aa17.14■□□□□ 0.33
GAA-201ENST00000302262 SYNJ1O43426 1573 aa17.12■□□□□ 0.33
GAA-201ENST00000302262 PDS5BQ9NTI5 1447 aa17.12■□□□□ 0.33
GAA-201ENST00000302262 CUX2O14529 1486 aa17.11■□□□□ 0.33
GAA-201ENST00000302262 TDRD9Q8NDG6 1382 aaKnown RBP17.1■□□□□ 0.33
GAA-201ENST00000302262 KIF27Q86VH2 1401 aa17.07■□□□□ 0.32
GAA-201ENST00000302262 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
GAA-201ENST00000302262 YTHDC1Q96MU7 727 aaKnown RBP17.06■□□□□ 0.32
GAA-201ENST00000302262 RAD54L2Q9Y4B4 1467 aa17.03■□□□□ 0.32
GAA-201ENST00000302262 CEP162Q5TB80 1403 aa17.02■□□□□ 0.32
GAA-201ENST00000302262 ARID3CA6NKF2 412 aa17.01■□□□□ 0.31
GAA-201ENST00000302262 CUX1P39880 1505 aa17.01■□□□□ 0.31
GAA-201ENST00000302262 EEA1Q15075 1411 aa17.01■□□□□ 0.31
GAA-201ENST00000302262 FGD5Q6ZNL6 1462 aa17■□□□□ 0.31
GAA-201ENST00000302262 GOLGA3Q08378 1498 aa16.98■□□□□ 0.31
GAA-201ENST00000302262 RAPGEF2Q9Y4G8 1499 aa16.94■□□□□ 0.3
GAA-201ENST00000302262 DIEXFQ68CQ4 756 aaKnown RBP16.94■□□□□ 0.3
GAA-201ENST00000302262 CARMIL1Q5VZK9 1371 aa16.93■□□□□ 0.3
GAA-201ENST00000302262 CLIP1P30622 1438 aa16.92■□□□□ 0.3
GAA-201ENST00000302262 TNIKQ9UKE5 1360 aa16.9■□□□□ 0.3
GAA-201ENST00000302262 CHMP7Q8WUX9 453 aaPredicted RBP16.89■□□□□ 0.29
GAA-201ENST00000302262 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
GAA-201ENST00000302262 TOPBP1Q92547 1522 aa16.87■□□□□ 0.29
GAA-201ENST00000302262 IGF1RP08069 1367 aa16.85■□□□□ 0.29
GAA-201ENST00000302262 POLA1P09884 1462 aaPredicted RBP16.84■□□□□ 0.29
GAA-201ENST00000302262 AQRO60306 1485 aaKnown RBP eCLIP16.82■□□□□ 0.281e-7■■□□□ 14.5
GAA-201ENST00000302262 LAMC3Q9Y6N6 1575 aa16.82■□□□□ 0.28
GAA-201ENST00000302262 URB2Q14146 1524 aaKnown RBP16.81■□□□□ 0.28
GAA-201ENST00000302262 FAM50AQ14320 339 aaKnown RBP16.79■□□□□ 0.28
GAA-201ENST00000302262 BCL11AQ9H165 835 aa16.79■□□□□ 0.28
GAA-201ENST00000302262 DNMBPQ6XZF7 1577 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms