RNA–Protein interactions for RNA: ENST00000361242.8

ATG9A-201, Transcript of autophagy related 9A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ATG9A, Length 3,130 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-201ENST00000361242 NISCHQ9Y2I1 1504 aa29.9■■■□□ 2.38
ATG9A-201ENST00000361242 CCDC180Q9P1Z9 1646 aa25.84■■□□□ 1.73
ATG9A-201ENST00000361242 DCAF8L2P0C7V8 631 aa25.32■■□□□ 1.64
ATG9A-201ENST00000361242 ABCC9O60706 1549 aa25.15■■□□□ 1.62
ATG9A-201ENST00000361242 ZCCHC6Q5VYS8 1495 aaKnown RBP25.03■■□□□ 1.6
ATG9A-201ENST00000361242 SHROOM4Q9ULL8 1493 aa24.84■■□□□ 1.57
ATG9A-201ENST00000361242 DCAF1Q9Y4B6 1507 aa24.42■■□□□ 1.5
ATG9A-201ENST00000361242 NACADO15069 1562 aa24.2■■□□□ 1.46
ATG9A-201ENST00000361242 SCRIBQ14160 1630 aa24.19■■□□□ 1.46
ATG9A-201ENST00000361242 SUPT5HO00267 1087 aaKnown RBP24.19■■□□□ 1.46
ATG9A-201ENST00000361242 MYO15BQ96JP2 1530 aa24.12■■□□□ 1.45
ATG9A-201ENST00000361242 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
ATG9A-201ENST00000361242 PABPN1Q86U42 306 aaKnown RBP eCLIP23.88■■□□□ 1.41
ATG9A-201ENST00000361242 UNC13AQ9UPW8 1703 aa23.74■■□□□ 1.39
ATG9A-201ENST00000361242 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
ATG9A-201ENST00000361242 BICRAQ9NZM4 1560 aa23.54■■□□□ 1.36
ATG9A-201ENST00000361242 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
ATG9A-201ENST00000361242 HRCP23327 699 aa23.35■■□□□ 1.33
ATG9A-201ENST00000361242 RSF1Q96T23 1441 aaPredicted RBP23.26■■□□□ 1.31
ATG9A-201ENST00000361242 MROH2BQ7Z745 1585 aa23.26■■□□□ 1.31
ATG9A-201ENST00000361242 PCGF6Q9BYE7 350 aa23.23■■□□□ 1.31
ATG9A-201ENST00000361242 WIZO95785 1651 aa23.06■■□□□ 1.28
ATG9A-201ENST00000361242 BAZ1AQ9NRL2 1556 aaPredicted RBP23■■□□□ 1.27
ATG9A-201ENST00000361242 SMARCA4P51532 1647 aa22.99■■□□□ 1.27
ATG9A-201ENST00000361242 LOC105371045A0A1W2PR82 267 aa22.97■■□□□ 1.27
ATG9A-201ENST00000361242 PPARGC1BQ86YN6 1023 aaKnown RBP22.92■■□□□ 1.26
ATG9A-201ENST00000361242 EIF4G1Q04637 1599 aaKnown RBP22.81■■□□□ 1.24
ATG9A-201ENST00000361242 ATAD2BQ9ULI0 1458 aa22.72■■□□□ 1.23
ATG9A-201ENST00000361242 TRIM26Q12899 539 aaPredicted RBP22.63■■□□□ 1.21
ATG9A-201ENST00000361242 DNAJC5BQ9UF47 199 aa22.6■■□□□ 1.21
ATG9A-201ENST00000361242 TOP2AP11388 1531 aaKnown RBP22.59■■□□□ 1.21
ATG9A-201ENST00000361242 CC2D2AQ9P2K1 1620 aa22.57■■□□□ 1.2
ATG9A-201ENST00000361242 BAZ1BQ9UIG0 1483 aaKnown RBP22.57■■□□□ 1.2
ATG9A-201ENST00000361242 CCDC88BA6NC98 1476 aa22.56■■□□□ 1.2
ATG9A-201ENST00000361242 PEG3Q9GZU2 1588 aa22.55■■□□□ 1.2
ATG9A-201ENST00000361242 SMARCA2P51531 1590 aa22.52■■□□□ 1.2
ATG9A-201ENST00000361242 TRIM41Q8WV44 630 aa22.45■■□□□ 1.18
ATG9A-201ENST00000361242 NCAPD3P42695 1498 aa22.45■■□□□ 1.18
ATG9A-201ENST00000361242 FAM9AQ8IZU1 332 aaPredicted RBP22.38■■□□□ 1.17
ATG9A-201ENST00000361242 HMGXB3Q12766 1538 aa22.29■■□□□ 1.16
ATG9A-201ENST00000361242 EHMT2Q96KQ7 1210 aa22.26■■□□□ 1.15
ATG9A-201ENST00000361242 ZEB1P37275 1124 aaPredicted RBP22.24■■□□□ 1.15
ATG9A-201ENST00000361242 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
ATG9A-201ENST00000361242 NESP48681 1621 aa22.07■■□□□ 1.12
ATG9A-201ENST00000361242 PELP1Q8IZL8 1130 aaKnown RBP22.01■■□□□ 1.11
ATG9A-201ENST00000361242 CADPSQ9ULU8 1353 aa21.96■■□□□ 1.11
ATG9A-201ENST00000361242 CFTRP13569 1480 aa21.95■■□□□ 1.1
ATG9A-201ENST00000361242 WRNQ14191 1432 aaPredicted RBP eCLIP21.85■■□□□ 1.09
ATG9A-201ENST00000361242 SYNJ1O43426 1573 aa21.82■■□□□ 1.08
ATG9A-201ENST00000361242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.75■■□□□ 1.07
ATG9A-201ENST00000361242 FANCD2Q9BXW9 1451 aa21.75■■□□□ 1.07
ATG9A-201ENST00000361242 SOGA1O94964 1423 aa21.74■■□□□ 1.07
ATG9A-201ENST00000361242 SCAF1Q9H7N4 1312 aaKnown RBP21.74■■□□□ 1.07
ATG9A-201ENST00000361242 RUSC2Q8N2Y8 1516 aa21.74■■□□□ 1.07
ATG9A-201ENST00000361242 CCER1Q8TC90 406 aaPredicted RBP21.71■■□□□ 1.07
ATG9A-201ENST00000361242 CUX1P39880 1505 aa21.7■■□□□ 1.06
ATG9A-201ENST00000361242 LAMC3Q9Y6N6 1575 aa21.63■■□□□ 1.05
ATG9A-201ENST00000361242 TTBK1Q5TCY1 1321 aaPredicted RBP21.61■■□□□ 1.05
ATG9A-201ENST00000361242 PRDM2Q13029 1718 aa21.59■■□□□ 1.05
ATG9A-201ENST00000361242 KIF21AQ7Z4S6 1674 aa21.59■■□□□ 1.05
ATG9A-201ENST00000361242 TOP2BQ02880 1626 aa21.57■■□□□ 1.04
ATG9A-201ENST00000361242 PDS5BQ9NTI5 1447 aa21.56■■□□□ 1.04
ATG9A-201ENST00000361242 CEP164Q9UPV0 1460 aa21.56■■□□□ 1.04
ATG9A-201ENST00000361242 URB2Q14146 1524 aaKnown RBP21.53■■□□□ 1.04
ATG9A-201ENST00000361242 RAD54L2Q9Y4B4 1467 aa21.49■■□□□ 1.03
ATG9A-201ENST00000361242 BIVM-ERCC5R4GMW8 1640 aa21.49■■□□□ 1.03
ATG9A-201ENST00000361242 FGD5Q6ZNL6 1462 aa21.49■■□□□ 1.03
ATG9A-201ENST00000361242 TOPBP1Q92547 1522 aa21.48■■□□□ 1.03
ATG9A-201ENST00000361242 CEP162Q5TB80 1403 aa21.45■■□□□ 1.03
ATG9A-201ENST00000361242 CSRNP3Q8WYN3 585 aa21.45■■□□□ 1.02
ATG9A-201ENST00000361242 ERCC6Q03468 1493 aa21.44■■□□□ 1.02
ATG9A-201ENST00000361242 DIEXFQ68CQ4 756 aaKnown RBP21.42■■□□□ 1.02
ATG9A-201ENST00000361242 ACIN1Q9UKV3 1341 aaKnown RBP21.42■■□□□ 1.02
ATG9A-201ENST00000361242 POLA1P09884 1462 aaPredicted RBP21.4■■□□□ 1.02
ATG9A-201ENST00000361242 NEUROD1Q13562 356 aa21.39■■□□□ 1.01
ATG9A-201ENST00000361242 UBTFP17480 764 aaKnown RBP21.38■■□□□ 1.01
ATG9A-201ENST00000361242 DNMBPQ6XZF7 1577 aa21.38■■□□□ 1.01
ATG9A-201ENST00000361242 TNIKQ9UKE5 1360 aa21.36■■□□□ 1.01
ATG9A-201ENST00000361242 CUX2O14529 1486 aa21.35■■□□□ 1.01
ATG9A-201ENST00000361242 RANGAP1P46060 587 aaPredicted RBP21.34■■□□□ 1.01
ATG9A-201ENST00000361242 TDRD9Q8NDG6 1382 aaKnown RBP21.33■■□□□ 1.01
ATG9A-201ENST00000361242 MRC2Q9UBG0 1479 aa21.31■■□□□ 1
ATG9A-201ENST00000361242 CENPBP07199 599 aaPredicted RBP21.27■□□□□ 0.99
ATG9A-201ENST00000361242 EEA1Q15075 1411 aa21.26■□□□□ 0.99
ATG9A-201ENST00000361242 MYT1Q01538 1121 aa21.26■□□□□ 0.99
ATG9A-201ENST00000361242 KIF27Q86VH2 1401 aa21.24■□□□□ 0.99
ATG9A-201ENST00000361242 GTF3C3Q9Y5Q9 886 aa21.22■□□□□ 0.99
ATG9A-201ENST00000361242 RAPGEF2Q9Y4G8 1499 aa21.22■□□□□ 0.99
ATG9A-201ENST00000361242 IGF1RP08069 1367 aa21.21■□□□□ 0.99
ATG9A-201ENST00000361242 AQRO60306 1485 aaKnown RBP eCLIP21.2■□□□□ 0.981e-7■■■■■ 36.4
ATG9A-201ENST00000361242 GOLGA3Q08378 1498 aa21.19■□□□□ 0.98
ATG9A-201ENST00000361242 ZNF608Q9ULD9 1512 aaPredicted RBP21.18■□□□□ 0.98
ATG9A-201ENST00000361242 THOC2Q8NI27 1593 aaKnown RBP21.17■□□□□ 0.98
ATG9A-201ENST00000361242 ABCA10Q8WWZ4 1543 aa21.16■□□□□ 0.98
ATG9A-201ENST00000361242 ZNF316A6NFI3 1004 aaPredicted RBP21.15■□□□□ 0.98
ATG9A-201ENST00000361242 WDR62O43379 1518 aa21.15■□□□□ 0.98
ATG9A-201ENST00000361242 TARBP1Q13395 1621 aaKnown RBP21.12■□□□□ 0.97
ATG9A-201ENST00000361242 HNRNPUL2Q1KMD3 747 aaKnown RBP21.11■□□□□ 0.97
ATG9A-201ENST00000361242 PRXQ9BXM0 1461 aa21.08■□□□□ 0.96
ATG9A-201ENST00000361242 CARMIL1Q5VZK9 1371 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms